EY756030

Overview
NameEY756030
Unique NameEY756030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756030 vs. ExPASy Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 9.709e-59
Identity = 127/196 (64.80%), Postives = 148/196 (75.51%), Query Frame = 3
Query:  189 MQGVVLNPS-YSR-PHQTLDPPSCSRPASKSTKSFFGERVS--LTRWRNPVCHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVKL 764
            MQ + LNP+  SR P Q +DP S S       +    +R    + R  NP+     R L  R+    R  V+KAVATPD  +E+PLT EN+ESVLDEIRPYL+SDGGNVALHEIDGN+VR+KLQGACGSCPSS MTMKMGIERRLMEKIPEIVAVE++ DEETGLELNEENIEKVLEEIRPYL+G A GSL+LV++
Sbjct:    1 MQLLTLNPAAISRTPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSRQL-FRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEI 195          
BLAST of EY756030 vs. ExPASy Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.526e-46
Identity = 102/184 (55.43%), Postives = 128/184 (69.57%), Query Frame = 3
Query:  231 QTLDPPSCSRPA---SKSTKSFFGERVSLTRWRNPVCHSSCRLLLIRKRGAARRN-VIKAVA--TPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVKL 764
            QT   P  +  A   S +T S    +V+   W +    SS    L+      R   V+ A+A   P +A++LPLTA N+ESVLD++RPYL +DGG+VALHEI GNVVRLKLQGACGSCPSS++T+K GIERRLMEKIP++ AVE V D+ETGLELNEEN+EKVL EIRPYL G  GG L+ + +
Sbjct:    2 QTTTVPMAAAAAVAPSTTTSSSASFKVAAYAWSSCRSSSSPATRLVAAPNHQRPPLVVGAIAGLDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLMI 185          
BLAST of EY756030 vs. ExPASy Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.729e-40
Identity = 82/114 (71.93%), Postives = 96/114 (84.21%), Query Frame = 3
Query:  426 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEET-GLELNEENIEKVLEEIRPYLVGAAGGSLELVKL 764
            +PLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE RL +KIPEI++VE   + ET GLELN+ENIEKVL E+RPYL G  GG LELV++
Sbjct:   82 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEI 195          
BLAST of EY756030 vs. ExPASy Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.875e-18
Identity = 53/118 (44.92%), Postives = 76/118 (64.41%), Query Frame = 3
Query:  414 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVA-VESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVKL 764
            SA    LT +N++ VL+++RP+LISDGGNV +  ++  VV LKLQGAC SCPSS  TM MGIER L EK  + +  +  V DEE   ++  E +   L+ +RP  +   GGS+E++ +
Sbjct:   79 SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRP-AIKNYGGSVEVLSV 194          
BLAST of EY756030 vs. ExPASy Swiss-Prot
Match: YUTI_BACSU (Putative nitrogen fixation protein yutI OS=Bacillus subtilis GN=yutI PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.568e-16
Identity = 37/70 (52.86%), Postives = 55/70 (78.57%), Query Frame = 3
Query:  441 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 650
            E ++ VLD++RP+L+ DGG+  L ++D  +V+L+L GACGSCPSS +T+K GIER L+E++P +V VE V
Sbjct:   41 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEEVPGVVEVEQV 110          
BLAST of EY756030 vs. ExPASy Swiss-Prot
Match: NIFU_ANASL (Nitrogen fixation protein nifU (Fragment) OS=Anabaena sp. (strain L31) GN=nifU PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.124e-14
Identity = 38/69 (55.07%), Postives = 55/69 (79.71%), Query Frame = 3
Query:  447 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 650
            I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSCPSS  T+K+ IE RL ++I   + VE+V
Sbjct:   44 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRINPSLVVEAV 112          
BLAST of EY756030 vs. ExPASy Swiss-Prot
Match: NIFU_ANASP (Nitrogen fixation protein nifU OS=Anabaena sp. (strain PCC 7120) GN=nifU PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.917e-14
Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 3
Query:  393 KAVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 650
            K    P+S  + PLT       I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS  T+K+ IE RL ++I   + VE+V
Sbjct:  210 KPTNIPNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRINPSLVVEAV 300          
BLAST of EY756030 vs. ExPASy Swiss-Prot
Match: NIFU_ANAAZ (Nitrogen fixation protein nifU OS=Anabaena azollae GN=nifU PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.917e-14
Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 3
Query:  393 KAVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 650
            K    P+S  + PLT       I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS  T+K+ IE RL ++I   + VE+V
Sbjct:  210 KPTNIPNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRINPSLVVEAV 300          
BLAST of EY756030 vs. ExPASy Swiss-Prot
Match: NFU1_DROME (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 3
Query:  435 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADE-ETGLELNEENIEKVLEEIR 716
            T   I+ +LD  IRP +  DGG++     +G VV+LK+QG+C SCPSS++T+K G++  L   IPE+ +VE V DE +  +E   E  EK L+ ++
Sbjct:  178 TVMMIKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRMIESEFERFEKNLKTLK 273          
BLAST of EY756030 vs. ExPASy Swiss-Prot
Match: NFU1_DROPE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila persimilis GN=GL13432 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 3
Query:  435 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNE-ENIEKVLEEIRP--YLVGAAGG 743
            T   I+ +LD  IRP +  DGG++     +  VV+LK+QG+C SCPSS++T+K G++  L   IPE+ +VE V D+   +   E E  EK L++  P    VG  GG
Sbjct:  174 TVMMIKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDDADRMADKEFERFEKNLKQKEPAGAPVGIGGG 280          
The following BLAST results are available for this feature:
BLAST of EY756030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
NIFU2_ARATH9.709e-5964.80NifU-like protein 2, chloroplastic OS=Arabidopsis ... [more]
NIFU1_ORYSJ5.526e-4655.43NifU-like protein 1, chloroplastic OS=Oryza sativa... [more]
NIFU3_ARATH7.729e-4071.93NifU-like protein 3, chloroplastic OS=Arabidopsis ... [more]
NIFU1_ARATH4.875e-1844.92NifU-like protein 1, chloroplastic OS=Arabidopsis ... [more]
YUTI_BACSU1.568e-1652.86Putative nitrogen fixation protein yutI OS=Bacillu... [more]
NIFU_ANASL1.124e-1455.07Nitrogen fixation protein nifU (Fragment) OS=Anaba... [more]
NIFU_ANASP1.917e-1447.25Nitrogen fixation protein nifU OS=Anabaena sp. (st... [more]
NIFU_ANAAZ1.917e-1447.25Nitrogen fixation protein nifU OS=Anabaena azollae... [more]
NFU1_DROME6.167e-1341.67NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROPE1.794e-1240.19NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-G10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756030 ID=EY756030; Name=EY756030; organism=Citrus sinensis; type=EST; length=907bp
CCCGCGTCCGAAAAAAAAATACCAACAAAGACTGCGCCAACCGCCCGCGA
CCACGCGTAACGAAAGCAAAATAAAACAGGCCCACAGATCGATTCAATTA
ATCGTTAAACCATCAATTTTTATCAAATCGAATCCCCTGAAAGGAAAAAA
AAAAAAAAGTATACACCCGAAGAAATACAAAGAGAAAGATGCAAGGCGTT
GTGTTGAACCCATCTTACAGTCGCCCTCACCAAACCCTAGACCCTCCTTC
TTGTTCGCGTCCTGCCTCTAAGAGTACTAAAAGTTTCTTTGGAGAACGAG
TTTCGCTTACGAGGTGGCGGAATCCGGTGTGTCACAGCTCGTGTCGGTTA
CTGCTGATTCGGAAGCGTGGGGCCGCGCGAAGGAACGTCATAAAGGCTGT
GGCTACTCCTGATTCAGCTATTGAGTTACCTTTAACTGCTGAGAATATTG
AAAGTGTATTGGATGAAATTCGACCATATCTTATATCAGATGGGGGAAAT
GTGGCATTACATGAGATTGATGGCAATGTTGTACGATTGAAGCTACAGGG
AGCATGTGGGTCTTGCCCCAGTTCTGTTATGACGATGAAGATGGGTATTG
AGCGTCGCTTAATGGAGAAGATCCCCGAGATAGTTGCAGTGGAATCGGTA
GCAGATGAAGAAACTGGGCTTGAGCTGAATGAAGAAAATATAGAGAAGGT
ACTTGAGGAAATCAGGCCCTATCTTGTTGGGGCAGCAGGTGGATCACTTG
AACTTGTGAAATTGATGAGCCAATAGTAAAGTCGAATACGGGTCCGGCAG
CTGGAGCATGACTGGTCGTGTGGCTGTTACCCAAAGGTGCGTGAAAAATC
CCAGCCATGCAGCAGTTCACTTTCTTAATGTCGAGCACTGGGGCATGACT
ATCGTGT
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