EY756019
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB1_ARATH (Coatomer subunit beta-1 OS=Arabidopsis thaliana GN=At4g31480 PE=1 SV=2) HSP 1 Score: 269.24 bits (687), Expect = 3.079e-91 Identity = 138/179 (77.09%), Postives = 153/179 (85.47%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVKK 549 SNVASA+DV++FVREIIE NPKLRVSIITRLLD FYQIRA +VC CALWIIGEYC SLSEVE+GI+TI QCLGELPF+SVSEE E T++SKK R+P +LADGTYATQSAASET FS PT+VQG+LTSGNLR+LLLTGDFFLGAVVACTLTKLVLRLEEVQ S+ EV K Sbjct: 407 SNVASALDVVVFVREIIETNPKLRVSIITRLLDTFYQIRAGKVCPCALWIIGEYCLSLSEVESGISTITQCLGELPFYSVSEESEPTETSKK-IQPTSSAMVSSRKPVILADGTYATQSAASETTFSSPTVVQGSLTSGNLRALLLTGDFFLGAVVACTLTKLVLRLEEVQSSKTEVNK 584 HSP 2 Score: 88.1965 bits (217), Expect = 3.079e-91 Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 3 Query: 558 QALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLLCNTG*YIRKIWLQSCRRALLRCFRE 743 QALLIMVSMLQL QSPV PHPIDNDS++RIV+CI+LLC+ ++KIWL+SCR++ ++ E Sbjct: 588 QALLIMVSMLQLGQSPVSPHPIDNDSYERIVLCIKLLCHRNDEMKKIWLESCRQSFVKMISE 649
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB2_ARATH (Coatomer subunit beta-2 OS=Arabidopsis thaliana GN=At4g31490 PE=1 SV=2) HSP 1 Score: 269.24 bits (687), Expect = 1.979e-90 Identity = 138/179 (77.09%), Postives = 153/179 (85.47%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVKK 549 SNVASA+DV++FVREIIE NPKLRVSIITRLLD FYQIRA +VC CALWIIGEYC SLSEVE+GI+TI QCLGELPF+SVSEE E T++SKK R+P +LADGTYATQSAASET FS PT+VQG+LTSGNLR+LLLTGDFFLGAVVACTLTKLVLRLEEVQ S+ EV K Sbjct: 407 SNVASALDVVVFVREIIETNPKLRVSIITRLLDTFYQIRAGKVCPCALWIIGEYCLSLSEVESGISTITQCLGELPFYSVSEESEPTETSKK-IQPTSSAMVSSRKPVILADGTYATQSAASETTFSSPTVVQGSLTSGNLRALLLTGDFFLGAVVACTLTKLVLRLEEVQSSKTEVNK 584 HSP 2 Score: 85.5001 bits (210), Expect = 1.979e-90 Identity = 38/62 (61.29%), Postives = 52/62 (83.87%), Query Frame = 3 Query: 558 QALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLLCNTG*YIRKIWLQSCRRALLRCFRE 743 QALLIMVS+LQL QSPV PHPIDNDS++RI++CI+LLC+ ++KIWL+SCR++ ++ E Sbjct: 588 QALLIMVSILQLGQSPVSPHPIDNDSYERIMLCIKLLCHRNVEMKKIWLESCRQSFVKMISE 649
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB1_ORYSJ (Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica GN=Os11g0174000 PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 8.199e-86 Identity = 125/180 (69.44%), Postives = 148/180 (82.22%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTS-GNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVKK 549 +NVA+A+DV++FVREIIE NPKLRVS+I RL+D FYQIRA+RVC+CALWI+GEY SLSEVE+ I+TIKQCLG+LPF++VSEEGE TD+SK RRP VLADGTYATQSAA+ETA S P + G+L+S NLRSL+L+GDFFL AVVACTLTKLVLRLEEVQPS+ E K Sbjct: 409 TNVAAAVDVVLFVREIIETNPKLRVSMIQRLIDTFYQIRASRVCSCALWILGEYSLSLSEVESAISTIKQCLGDLPFYTVSEEGESTDASKPAQPVVNSVTVSSRRPVVLADGTYATQSAATETAISSPAVAPGSLSSTQNLRSLILSGDFFLAAVVACTLTKLVLRLEEVQPSKAEANK 588 HSP 2 Score: 92.4337 bits (228), Expect = 8.199e-86 Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 3 Query: 561 ALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLLCNTG*YIRKIWLQSCRRALLRCFRE 743 ALLIMVS+LQL QS LPHPIDNDS+DRIV+C+RLLCNTG +RK+WLQSCR++ + E Sbjct: 593 ALLIMVSILQLGQSSYLPHPIDNDSYDRIVLCVRLLCNTGDDVRKVWLQSCRQSFTKMLAE 653
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB2_ORYSJ (Coatomer subunit beta-2 OS=Oryza sativa subsp. japonica GN=Os01g0281400 PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 1.667e-83 Identity = 124/180 (68.89%), Postives = 149/180 (82.78%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSG-NLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVKK 549 +NVA+A+DV++FVREIIE NPKLRVS+I RL+D FYQIRA+RVC+CALWI+GEY SLSEVEN I+TIKQCLG++PF++VSEEGE TDS+K RRP VLADGTYATQSAA+E A S P++ G+L+S NLRSL+L+GDFFL AV++CTLTKLVLRLEEVQPS VEV K Sbjct: 408 TNVAAAVDVVLFVREIIETNPKLRVSMIQRLIDTFYQIRASRVCSCALWILGEYSLSLSEVENAISTIKQCLGDVPFYTVSEEGEATDSAKPAQPVVNSVTVSSRRPVVLADGTYATQSAATE-AISTPSVAPGSLSSTLNLRSLILSGDFFLAAVISCTLTKLVLRLEEVQPSMVEVNK 586 HSP 2 Score: 90.5077 bits (223), Expect = 1.667e-83 Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 3 Query: 561 ALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLLCNTG*YIRKIWLQSCRRALLRCFRE 743 ALL+M S+LQL QS LPHPIDNDS+DRIV+C+RLLCNTG +RK+WLQSCR++ + E Sbjct: 591 ALLVMTSILQLGQSSYLPHPIDNDSYDRIVLCVRLLCNTGDDVRKVWLQSCRQSFAKMLAE 651
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB_DROME (Coatomer subunit beta OS=Drosophila melanogaster GN=betaCop PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 7.560e-26 Identity = 66/183 (36.07%), Postives = 97/183 (53.01%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEE---GEDTDSSKKXXXXXXXXXXXXRRPA---------VLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQ 525 +N +A DV+IF+RE I+ P LR II L++ F QI+++++ A+WI+GEY + S++ IA I+Q LGE+P + G+ T+ K+ V +DGTYATQSA S +P V LR L+ GDFF+GA ++ TLTKL LR E++ Sbjct: 409 TNELAAADVLIFIREAIQKFPALRALIIEHLIEAFPQIKSSKIHRAAVWILGEYVEG-SQILEVIAVIQQTLGEVPMVEAEQRRLAGDQTEEQKQQQGSAGGNAAGSAAEGSGSGNASNKVTSDGTYATQSAYS---LAP---VAKAEKRPPLRQYLMDGDFFIGAALSATLTKLALRYAELE 584 HSP 2 Score: 39.6614 bits (91), Expect = 7.560e-26 Identity = 23/56 (41.07%), Postives = 29/56 (51.79%), Query Frame = 3 Query: 558 QALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLLCNTG*YIRKIWLQSCRRAL 725 Q +LIM S+L L +S PI ND DRI VC+R L ++ CR AL Sbjct: 596 QVMLIMSSILHLGKSGFPSKPITNDDTDRIFVCLRTLSERTPEAISVFTLYCREAL 651
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB_RAT (Coatomer subunit beta OS=Rattus norvegicus GN=Copb1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.022e-24 Identity = 61/166 (36.75%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLR 510 SN A+A DV+ FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++ LGE+P SE ++ K + V GTYATQSA S S PT + LR LL GDFF+ A +A TLTK+ LR Sbjct: 412 SNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRSLGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTKKEEDRPP--LRGFLLDGDFFVAASLATTLTKIALR 567 HSP 2 Score: 40.0466 bits (92), Expect = 3.022e-24 Identity = 18/56 (32.14%), Postives = 35/56 (62.50%), Query Frame = 3 Query: 558 QALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLLCNTG*YIRKIWLQSCRRAL 725 +A+L+M ++L L +S + PI +D DRI +C+++L + I+ + CR++L Sbjct: 584 EAMLLMATILHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSL 639
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB_MOUSE (Coatomer subunit beta OS=Mus musculus GN=Copb1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.022e-24 Identity = 61/166 (36.75%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLR 510 SN A+A DV+ FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++ LGE+P SE ++ K + V GTYATQSA S S PT + LR LL GDFF+ A +A TLTK+ LR Sbjct: 412 SNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRSLGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTKKEEDRPP--LRGFLLDGDFFVAASLATTLTKIALR 567 HSP 2 Score: 40.0466 bits (92), Expect = 3.022e-24 Identity = 18/56 (32.14%), Postives = 35/56 (62.50%), Query Frame = 3 Query: 558 QALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLLCNTG*YIRKIWLQSCRRAL 725 +A+L+M ++L L +S + PI +D DRI +C+++L + I+ + CR++L Sbjct: 584 EAMLLMATILHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSL 639
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB_BOVIN (Coatomer subunit beta OS=Bos taurus GN=COPB1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.022e-24 Identity = 61/166 (36.75%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLR 510 SN A+A DV+ FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++ LGE+P SE ++ K + V GTYATQSA S S PT + LR LL GDFF+ A +A TLTK+ LR Sbjct: 412 SNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKDDIQSVMTEVRRSLGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTKKEEERPP--LRGFLLDGDFFVAASLATTLTKIALR 567 HSP 2 Score: 40.0466 bits (92), Expect = 3.022e-24 Identity = 18/56 (32.14%), Postives = 35/56 (62.50%), Query Frame = 3 Query: 558 QALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLLCNTG*YIRKIWLQSCRRAL 725 +A+L+M ++L L +S + PI +D DRI +C+++L + I+ + CR++L Sbjct: 584 EAMLLMATILHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSL 639
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB_PONAB (Coatomer subunit beta OS=Pongo abelii GN=COPB1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 5.118e-24 Identity = 61/166 (36.75%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLR 510 +N A+A DV+ FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + I++ LGE+P SE ++ K + V GTYATQSA S S PT + LR LL GDFF+ A +A TLTK+ LR Sbjct: 412 NNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEIRRSLGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTKKEEDRPP--LRGFLLDGDFFVAASLATTLTKIALR 567 HSP 2 Score: 40.0466 bits (92), Expect = 5.118e-24 Identity = 18/56 (32.14%), Postives = 35/56 (62.50%), Query Frame = 3 Query: 558 QALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLLCNTG*YIRKIWLQSCRRAL 725 +A+L+M ++L L +S + PI +D DRI +C+++L + I+ + CR++L Sbjct: 584 EAMLLMATILHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSL 639
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB_HUMAN (Coatomer subunit beta OS=Homo sapiens GN=COPB1 PE=1 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 5.118e-24 Identity = 61/166 (36.75%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLR 510 +N A+A DV+ FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + I++ LGE+P SE ++ K + V GTYATQSA S S PT + LR LL GDFF+ A +A TLTK+ LR Sbjct: 412 NNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEIRRSLGEIPIVE-SEIKKEAGELKPEEEITVGPV----QKLVTEMGTYATQSALSS---SRPTKKEEDRPP--LRGFLLDGDFFVAASLATTLTKIALR 567 HSP 2 Score: 40.0466 bits (92), Expect = 5.118e-24 Identity = 18/56 (32.14%), Postives = 35/56 (62.50%), Query Frame = 3 Query: 558 QALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLLCNTG*YIRKIWLQSCRRAL 725 +A+L+M ++L L +S + PI +D DRI +C+++L + I+ + CR++L Sbjct: 584 EAMLLMATILHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSL 639 The following BLAST results are available for this feature:
BLAST of EY756019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756019 ID=EY756019; Name=EY756019; organism=Citrus sinensis; type=EST; length=875bpback to top |