EY755956

Overview
NameEY755956
Unique NameEY755956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755956 vs. ExPASy Swiss-Prot
Match: Y1341_ORYSJ (B3 domain-containing protein Os01g0234100 OS=Oryza sativa subsp. japonica GN=Os01g0234100 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.119e-13
Identity = 34/119 (28.57%), Postives = 71/119 (59.66%), Query Frame = 1
Query:  277 NDTDALRACKF-TTSRDEFAMWDKTLKAFELLGMSVGFXXXXXXXXXXXXFESEGAEDTRRYIEAKAQQSQTQDEIRNIEARLVELKGAWQRFDAEISSLKSSAESYELKFREVANAPW 630
            N  + +RAC   T+S+++F +W KTL++F+LLGM+V F             +     +  +Y E K ++S+  ++++ +E+ ++ +K   ++ DAE+  ++SS  ++++  R++A APW
Sbjct:  377 NIAEGIRACGAGTSSQEDFLIWKKTLQSFDLLGMNVAFLLKRVDDILGLPEQPRDPSECSKYNELKLERSRAGEKVKALESMMLTVKDVLKKIDAEMEEMESSVRNHDIALRKIATAPW 495          

HSP 2 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 1
Query:   34 TSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRANDFTEVDGALGLLNLDAPSKQ 276
            T +VLEDE+G  +   Y   K GLSAGWR F+  H++  GDV+VF+L++  K KV+IIR  + +  D A GL +  A  K+
Sbjct:  183 TDIVLEDENGNNHNTNYLGGKQGLSAGWRGFAINHDIKVGDVVVFELVSTTKFKVHIIRDKNISPTDRAPGLKSFYACKKR 263          
BLAST of EY755956 vs. ExPASy Swiss-Prot
Match: Y6944_ORYSJ (B3 domain-containing protein Os06g0194400 OS=Oryza sativa subsp. japonica GN=Os06g0194400 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 41/78 (52.56%), Postives = 47/78 (60.26%), Query Frame = 1
Query:    1 FGRPTRPTRLATSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRANDFTEVD 234
            F R   P R  T + L DE   ++   Y A K GLS GWR FS AH LV+GD LVFQLI   K KVYIIRA+ + E D
Sbjct:  160 FSRKYLPKRDET-IRLVDEEDDEFDTLYLANKRGLSGGWRGFSIAHKLVDGDCLVFQLIQRTKFKVYIIRASSYYETD 236          
BLAST of EY755956 vs. ExPASy Swiss-Prot
Match: Y5814_ORYSJ (B3 domain-containing protein Os05g0481400 OS=Oryza sativa subsp. japonica GN=Os05g0481400 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 1
Query:    4 GRPTRPTRLAT-----SVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRAND 219
            G PTR  +L        +VLEDE G ++ + Y   +TGLS GWR F+  HNL +GD LVF+L  P + K+YII+A D
Sbjct:  155 GLPTRFCKLHLPPKEYKMVLEDEEGGEFDSVYIGNRTGLSGGWRGFAMHHNLEDGDSLVFELAEPDRFKIYIIKAVD 231          
BLAST of EY755956 vs. ExPASy Swiss-Prot
Match: Y3918_ARATH (B3 domain-containing protein At3g19184 OS=Arabidopsis thaliana GN=At3g19184 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 39/83 (46.99%), Postives = 47/83 (56.63%), Query Frame = 1
Query:   40 VVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRANDFTEVDGALGLLNLDAPSKQNDTD 288
            + L DE   +  AKY A+K GLS GWR F+  H LV+GD +VF LIA    KVYIIR ND    D     +N D  S  N+ D
Sbjct:  163 MTLVDEEEEESQAKYLAQKNGLSGGWRGFAIDHQLVDGDAVVFHLIARTTFKVYIIRVNDDANNDSDGNEVN-DDDSDGNEED 244          
The following BLAST results are available for this feature:
BLAST of EY755956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
Y1341_ORYSJ2.119e-1328.57B3 domain-containing protein Os01g0234100 OS=Oryza... [more]
Y6944_ORYSJ1.052e-1252.56B3 domain-containing protein Os06g0194400 OS=Oryza... [more]
Y5814_ORYSJ3.384e-1146.75B3 domain-containing protein Os05g0481400 OS=Oryza... [more]
Y3918_ARATH5.772e-1146.99B3 domain-containing protein At3g19184 OS=Arabidop... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-H07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755956 ID=EY755956; Name=EY755956; organism=Citrus sinensis; type=EST; length=903bp
TTCGGTCGACCCACGCGTCCGACCAGATTGGCTACCTCTGTGGTTTTGGA
AGATGAATCTGGAATCCAGTACACGGCAAAATATTTTGCTGAAAAGACGG
GATTGAGTGCTGGTTGGAGACAATTTTCCACTGCACACAATTTGGTTGAG
GGAGATGTTTTGGTCTTTCAGTTAATTGCACCTCTAAAACTTAAGGTGTA
CATAATAAGGGCCAATGATTTTACTGAGGTGGATGGGGCTCTTGGCCTTC
TAAATTTGGATGCTCCTTCAAAGCAAAATGATACAGATGCCTTGAGAGCT
TGCAAGTTTACTACATCCCGTGATGAATTTGCTATGTGGGACAAGACTCT
GAAAGCCTTTGAGCTTTTGGGCATGAGTGTCGGCTTCTTACGTGCTCGCC
TACGCCGGCTTCAGAGATTAGCTTTTGAATCAGAAGGTGCCGAGGACACA
AGGAGGTATATAGAAGCTAAAGCTCAACAATCTCAGACGCAAGATGAGAT
AAGAAATATTGAAGCAAGGCTCGTGGAATTGAAAGGTGCTTGGCAGAGGT
TTGATGCAGAAATCTCAAGTCTGAAGTCCTCAGCTGAGAGCTATGAGCTC
AAGTTCCGAGAAGTGGCAAACGCTCCATGGTGACGTTCTAGTTGTTATGT
GCCTAATAATTTTTTGTTAAATTTTTTTTTTTAAATTACCGTTGGTCAAT
CCTTTTTTTTCTTGTGTATCATCATTAATGACTCCTCTGTAACTTGAAAT
AGNCACGAGGTGAACCTGTTTTCATGTGGTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAAAAAAAGGGCGCCGCTCTAAGGATCCNA
GCTACGTACCGTGCATGCACGTCAAACTCTTCTATGGGGCCCTAAATCAA
TCC
back to top