EY755834

Overview
NameEY755834
Unique NameEY755834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY755834 vs. ExPASy Swiss-Prot
Match: TPC1B_TOBAC (Two pore calcium channel protein 1B OS=Nicotiana tabacum GN=TPC1B PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 4.034e-88
Identity = 155/234 (66.24%), Postives = 175/234 (74.79%), Query Frame = 2 
Query:   50 WIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIXXXXXXXXXXXXXXXMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLKETDLADDDYLLFNFNDYPNGMVTLFNLLLMGNWQVWMQSYK*LTGTAWTLAYFVSFYXXXXXXXXXXXXXXXXEAFFAEMELESS*KCETKDNDGEPTERRRRVEQK 751
            W+YV+EMALK+Y+YGFENYWRDGQNRFDF+VTWVIVIGET T  +P+  TFLSNGEWI               MHV++YR FVATFLTLIPSLMPYLGTIFC+ C YCSLG+QIFGGIVN GN  L +TDLA +DYLLFNFNDYPNGMVTLFN+L+MGNWQVWMQSYK LTGT+WT AYFVSFY                EAF AEM+LE+S +C   D+     ERRR V  K
Sbjct:  476 WLYVIEMALKVYTYGFENYWRDGQNRFDFIVTWVIVIGETTTFVAPDDLTFLSNGEWIRYLLIARMLRLIRLLMHVERYRAFVATFLTLIPSLMPYLGTIFCILCFYCSLGLQIFGGIVNTGNPNLAQTDLAGNDYLLFNFNDYPNGMVTLFNILVMGNWQVWMQSYKELTGTSWTYAYFVSFYLISVLWLLNLIVAFVLEAFQAEMDLEASARCVDGDDKEAKRERRRNVGTK 709
[Close]
BLAST of EY755834 vs. ExPASy Swiss-Prot
Match: TCP1A_TOBAC (Two pore calcium channel protein 1A OS=Nicotiana tabacum GN=TPC1A PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 5.268e-88
Identity = 154/234 (65.81%), Postives = 176/234 (75.21%), Query Frame = 2 
Query:   50 WIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIXXXXXXXXXXXXXXXMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLKETDLADDDYLLFNFNDYPNGMVTLFNLLLMGNWQVWMQSYK*LTGTAWTLAYFVSFYXXXXXXXXXXXXXXXXEAFFAEMELESS*KCETKDNDGEPTERRRRVEQK 751
            W+YV+EMALK+Y+YGFENYWRDGQNRFDF+VTWVIVIGET T  +P+G TFLSNGEWI               MHV++YR FVATF TLIPSL+PYLGTIFC+ C YCSLG+QIFGGIVN GN  L +TDLA +DYLLFNFNDYPNGMVTLFN+L+MGNWQVWMQSYK LTGTAWT AYFVSFY                EAF AE++LE+S +C   D+    +ERRR V  K
Sbjct:  476 WLYVIEMALKVYTYGFENYWRDGQNRFDFVVTWVIVIGETATFVAPDGLTFLSNGEWIRYLLIARMLRLIRLLMHVERYRAFVATFFTLIPSLVPYLGTIFCILCFYCSLGLQIFGGIVNTGNPNLAQTDLAGNDYLLFNFNDYPNGMVTLFNILVMGNWQVWMQSYKELTGTAWTYAYFVSFYLISVLWLLNLIVAFVLEAFQAEVDLEASARCVDGDDKEAKSERRRNVGTK 709
[Close]
BLAST of EY755834 vs. ExPASy Swiss-Prot
Match: TPC1_ARATH (Two pore calcium channel protein 1 OS=Arabidopsis thaliana GN=TPC1 PE=1 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 4.460e-87
Identity = 155/253 (61.26%), Postives = 180/253 (71.15%), Query Frame = 2 
Query:   50 WIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIXXXXXXXXXXXXXXXMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLKETDLADDDYLLFNFNDYPNGMVTLFNLLLMGNWQVWMQSYK*LTGTAWTLAYFVSFYXXXXXXXXXXXXXXXXEAFFAEMELESS*KCETKDNDGEPTERRRRVEQKLQVKSGCPSPHMLNAGLQK 808
            WIYVLEMALKIY+YGFENYWR+G NRFDFLVTWVIVIGET T  +P+  TF SNGEWI               M+VQ+YR F+ATF+TLIPSLMPYLGTIFCV CIYCS+GVQ+FGG+VNAGN KL ET+LA+DDYLLFNFNDYPNGMVTLFNLL+MGNWQVWM+SYK LTGT W++ YFVSFY                EAFF E++LE   KC+ +D+  +   RR    +    +      HML   L K
Sbjct:  473 WIYVLEMALKIYTYGFENYWREGANRFDFLVTWVIVIGETATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMNVQRYRAFIATFITLIPSLMPYLGTIFCVLCIYCSIGVQVFGGLVNAGNKKLFETELAEDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMESYKDLTGTWWSITYFVSFYVITILLLLNLVVAFVLEAFFTELDLEEEEKCQGQDSQEKRNRRRSAGSKSRSQRVDTLLHHMLGDELSK 725
[Close]
BLAST of EY755834 vs. ExPASy Swiss-Prot
Match: TPC1_ORYSJ (Two pore calcium channel protein 1 OS=Oryza sativa subsp. japonica GN=TPC1 PE=1 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 1.943e-74
Identity = 135/231 (58.44%), Postives = 162/231 (70.13%), Query Frame = 2 
Query:   50 WIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIXXXXXXXXXXXXXXXMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLKETDLADDDYLLFNFNDYPNGMVTLFNLLLMGNWQVWMQSYK*LTGTAWTLAYFVSFYXXXXXXXXXXXXXXXXEAFFAEMELESS*KCETKDNDGEPTERRRRV 742
            WIYV+EMALKI+S GF  YW +GQN+FDF++TW I IGET+T A P+  +FLSNGEWI               + V+++R FVATF TL+ SLMPYLG +FC  CIYCSLG+QIFGGIV AGN  L+ETDL  +DYLLFNFNDYP+GMVTLFNLL+MGNWQ WM+SY+ LTG+ W+L YFVSFY                EAFFAEMELE   + + +D   E   RRR V
Sbjct:  498 WIYVIEMALKIFSLGFGAYWMEGQNKFDFVLTWTIFIGETLTFAFPSKLSFLSNGEWIRYLLLGRMLRLTRILLQVRRFRAFVATFFTLMSSLMPYLGIVFCTLCIYCSLGLQIFGGIVYAGNPTLEETDLFSNDYLLFNFNDYPSGMVTLFNLLVMGNWQAWMESYRQLTGSYWSLIYFVSFYLISVLLLLNLIVAFVLEAFFAEMELEKDGEADIQDPTLEGRNRRRSV 728
[Close]
BLAST of EY755834 vs. ExPASy Swiss-Prot
Match: TPC1_WHEAT (Two pore calcium channel protein 1 OS=Triticum aestivum GN=TPC1 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.645e-73
Identity = 136/236 (57.63%), Postives = 165/236 (69.92%), Query Frame = 2 
Query:   50 WIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIXXXXXXXXXXXXXXXMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLKETDLADDDYLLFNFNDYPNGMVTLFNLLLMGNWQVWMQSYK*LTGTAWTLAYFVSFYXXXXXXXXXXXXXXXXEAFFAEMELESS*KCETKDNDGEPTERRR--RVEQK 751
            WIYV EMALKI+S GF  YW +GQN+FDF++TW I IGET+T A P+   FLSNGEWI               + VQ++R FVATF TL+ SLMPYLG +FCV C+YCS+G+QIFGGIV AGN  L+ETDL ++DYLLFNFNDYP+GMVTLFNLL+MGNWQVWM+SY  LTGT+W+L YFVSFY                EAFFAEMELE   + + ++      ++RR  RV  K
Sbjct:  485 WIYVAEMALKIFSLGFGAYWMEGQNKFDFVLTWTIFIGETLTFAFPSKLPFLSNGEWIRYLLLGRVLRLTRILLQVQRFRAFVATFFTLMSSLMPYLGIVFCVLCMYCSIGLQIFGGIVYAGNPTLEETDLFNNDYLLFNFNDYPSGMVTLFNLLVMGNWQVWMESYWQLTGTSWSLIYFVSFYLISILLLLNLIVAFVLEAFFAEMELEKGEEVDIQNPTSGGIKKRRSMRVRSK 720
[Close]
BLAST of EY755834 vs. ExPASy Swiss-Prot
Match: TPC1_HORVU (Two pore calcium channel protein 1 OS=Hordeum vulgare GN=TPC1 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.393e-72
Identity = 135/236 (57.20%), Postives = 163/236 (69.07%), Query Frame = 2 
Query:   50 WIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIXXXXXXXXXXXXXXXMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLKETDLADDDYLLFNFNDYPNGMVTLFNLLLMGNWQVWMQSYK*LTGTAWTLAYFVSFYXXXXXXXXXXXXXXXXEAFFAEMELESS*KCETKDNDGEPTERRR--RVEQK 751
            WIYV EMALKI+S GF  YW +GQN+FDF++TW I IGET+T A P+   FLSNGEWI               + VQ++R FVATF TL+ SLMPYLG +FC+ C+YCSLG+QIFGGIV AGN  L+ETDL  +DYLLFNFNDYP+GMVTLFNLL+MGNWQVWM+SY  LTG++W+L YFVSFY                EAFFAEMELE   + + +       ++RR  RV  K
Sbjct:  485 WIYVAEMALKIFSLGFGAYWMEGQNKFDFVLTWTIFIGETLTFAFPSKLPFLSNGEWIRYLLLGRVLRLTRILLQVQRFRVFVATFFTLMSSLMPYLGIVFCILCMYCSLGLQIFGGIVYAGNPTLEETDLFSNDYLLFNFNDYPSGMVTLFNLLVMGNWQVWMESYWQLTGSSWSLIYFVSFYLISILLLLNLIVAFVLEAFFAEMELEKGEEVDIQSPTSGGIKKRRSMRVRSK 720
The following BLAST results are available for this feature:
BLAST of EY755834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
TPC1B_TOBAC4.034e-8866.24Two pore calcium channel protein 1B OS=Nicotiana t... [more]
TCP1A_TOBAC5.268e-8865.81Two pore calcium channel protein 1A OS=Nicotiana t... [more]
TPC1_ARATH4.460e-8761.26Two pore calcium channel protein 1 OS=Arabidopsis ... [more]
TPC1_ORYSJ1.943e-7458.44Two pore calcium channel protein 1 OS=Oryza sativa... [more]
TPC1_WHEAT1.645e-7357.63Two pore calcium channel protein 1 OS=Triticum aes... [more]
TPC1_HORVU1.393e-7257.20Two pore calcium channel protein 1 OS=Hordeum vulg... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-D05-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755834 ID=EY755834; Name=EY755834; organism=Citrus sinensis; type=EST; length=850bp
TTTTTTTTTTTTCAAATAAAAATCAAGTTATTCAACTTTTTCTATTAAGT
GGATATATGTACTGGAAATGGCTCTGAAAATTTATTCATATGGATTTGAG
AATTATTGGAGGGATGGTCAAAATCGCTTCGATTTTCTGGTCACATGGGT
GATAGTTATTGGAGAAACAATAACTCTTGCTTCACCTAACGGACAGACTT
TCCTTTCAAATGGAGAATGGATTCGCTACCTTCTTCTTGCAAGAATGTTA
AGATTGATCAGGCTCTTAATGCACGTCCAACAATACCGAGGATTTGTCGC
TACATTCTTAACTCTCATACCTAGTTTAATGCCATACCTTGGGACCATCT
TTTGTGTCCAATGCATCTATTGCTCTCTTGGTGTACAGATCTTTGGCGGG
ATTGTCAATGCTGGGAATGCCAAGTTAAAAGAGACAGATCTTGCTGATGA
TGATTATTTACTTTTTAATTTTAATGACTATCCAAATGGAATGGTGACAC
TTTTCAATTTGCTCCTCATGGGAAATTGGCAAGTTTGGATGCAGAGCTAC
AAATAGTTGACAGGAACTGCTTGGACTCTAGCATATTTTGTCAGCTTCTA
CCTAATAACTGTTTTACTACTATTGAATTTGGTCATAGCTTTTGTCTTGG
AGGCATTCTTTGCCGAAATGGAACTCGAGAGTTCATAGAAATGTGAAACA
AAAGACAATGATGGGGAACCAACGGAACGACGCCGACGTGTTGAACAAAA
ACTCCAAGTCAAAAGTGGATGTCCTTCTCCTCATATGCTCAACGCTGGAC
TGCAAAAATCTGTGATTCTTAAGGCTTTGCCGTAAATACTTGAACTTTGA
back to top