EY755130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY755130 vs. ExPASy Swiss-Prot
Match: PSBW_SPIOL (Photosystem II reaction center W protein, chloroplastic OS=Spinacia oleracea GN=psbW PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.264e-17 Identity = 52/125 (41.60%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 34 MASISSTNFPALLPRSGFVPKGLT--HASPVYGMPAMATTRGRVRCSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIY 402 MA+I++++ +L+ R+ V +SP+ G+P+M T R +V CS+ VDERM+TEGTGLPFGLSNN LGWILFGVFGLIWALYF+Y Sbjct: 1 MATITASSSASLVARASLVHNSRVGVSSSPILGLPSM-TKRSKVTCSIENKPSTTETTTTTNKSMGASLLAAAAAATISNPAMAL-VDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVY 123
BLAST of EY755130 vs. ExPASy Swiss-Prot
Match: PSBW_ARATH (Photosystem II reaction center W protein, chloroplastic OS=Arabidopsis thaliana GN=PSBW PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 4.713e-16 Identity = 51/123 (41.46%), Postives = 61/123 (49.59%), Query Frame = 1 Query: 37 ASISSTNFPALLPRSGFVPKGLTHASPVYGMPAMATTRGRVRCSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIYT 405 AS S PALL + + ++PV G+P M +G VRCS+ VDERM+TEGTGLPFGLSNN LGWILFGVFGLIW +F+YT Sbjct: 8 ASTVSAARPALL-----LKPTVAISAPVLGLPPMGKKKGGVRCSMETKQGNVSVMGAGVSAAATAALTAVMSNPAMAL-----VDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYT 120
BLAST of EY755130 vs. ExPASy Swiss-Prot
Match: PSBW_ORYSJ (Photosystem II reaction center W protein, chloroplastic OS=Oryza sativa subsp. japonica GN=PSBW PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.419e-12 Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 1 Query: 286 VDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFIYT 405 VDERM+TEGTGL GLSNN LGWIL GVFGLIW+LY IYT Sbjct: 71 VDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYT 110 The following BLAST results are available for this feature:
BLAST of EY755130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY755130 ID=EY755130; Name=EY755130; organism=Citrus sinensis; type=EST; length=587bpback to top |