EY755121

Overview
NameEY755121
Unique NameEY755121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length444
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755121 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 5.944e-36
Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 2
Query:    8 GSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENRV 262
            G+QSGDVIMRMMARNSMSEKLAEDID AVKRLSD AYEIALSQIR+NREA+DKIVEVLLEKET+SGDEFRAILSEF EIP ENRV
Sbjct:  582 GAQSGDVIMRMMARNSMSEKLAEDIDTAVKRLSDEAYEIALSQIRSNREAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVENRV 666          
BLAST of EY755121 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 5.032e-35
Identity = 75/87 (86.21%), Postives = 79/87 (90.80%), Query Frame = 2
Query:    2 MDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENRV 262
            MD S+  DVIMRMMARNSMSEKLA DID AVK LSD+AYEIALSQIRNNREA+DKIVE+LLEKETMSGDEFRAILSEF EIP ENRV
Sbjct:  585 MDSSEQSDVIMRMMARNSMSEKLANDIDTAVKTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSEFTEIPPENRV 671          
BLAST of EY755121 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.114e-33
Identity = 72/87 (82.76%), Postives = 78/87 (89.66%), Query Frame = 2
Query:    2 MDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENRV 262
            MD S   DVIMRMMARNSMSEKLAEDID+AVK+LSD AYEIALS I+NNREA+DK+VEVLLEKET+ GDEFRAILSEF EIP ENRV
Sbjct:  592 MDSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAILSEFTEIPPENRV 678          
BLAST of EY755121 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.060e-24
Identity = 52/78 (66.67%), Postives = 67/78 (85.90%), Query Frame = 2
Query:   14 QSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIP 247
            +  DV++RM+ARNSMSEKLAEDID+ VK++   AYE+A   +RNNREAIDK+V+VLLEKET++GDEFRAILSE+ + P
Sbjct:  594 KQNDVVLRMLARNSMSEKLAEDIDSCVKKIIGDAYEVAKKHVRNNREAIDKLVDVLLEKETLTGDEFRAILSEYTDQP 671          
BLAST of EY755121 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 8.902e-24
Identity = 52/83 (62.65%), Postives = 69/83 (83.13%), Query Frame = 2
Query:   11 SQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENR 259
            +Q GDV++RM+AR+SMSE+LA DIDAAV+ + D AYE+A + +R NR AID++V+VL+EKET+ GDEFRAILSE V+I  E R
Sbjct:  592 AQGGDVVLRMLARSSMSERLAADIDAAVRTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAILSEHVDIGKERR 674          
BLAST of EY755121 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.057e-12
Identity = 31/86 (36.05%), Postives = 62/86 (72.09%), Query Frame = 2
Query:   11 SQSGDVIMR--MMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAENRV 262
            S  G+V +   +M R+  SE++A  IDA V++L+++ +++A   ++  RE +D++V++L+EKET+ G+EFR I++E+ E+P + ++
Sbjct:  538 SSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIVAEYAEVPVKEQL 623          
The following BLAST results are available for this feature:
BLAST of EY755121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
FTSH2_ORYSJ5.944e-3690.59Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH8_ARATH5.032e-3586.21Cell division protease ftsH homolog 8, chloroplast... [more]
FTSH2_ARATH2.114e-3382.76Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH6_ARATH3.060e-2466.67Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH6_ORYSJ8.902e-2462.65Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH1_SYNY32.057e-1236.05Cell division protease ftsH homolog 1 OS=Synechocy... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-024-C08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755121 ID=EY755121; Name=EY755121; organism=Citrus sinensis; type=EST; length=444bp
CATGGACGGATCACAGAGTGGTGATGTCATCATGAGAATGATGGCAAGGA
ACTCAATGTCTGAGAAGCTTGCTGAAGACATTGATGCTGCAGTCAAGAGA
CTATCAGACCGTGCCTATGAGATTGCGTTGAGCCAAATAAGGAACAACCG
TGAAGCCATTGACAAGATCGTGGAAGTTCTTCTTGAGAAGGAAACAATGT
CAGGGGATGAATTCCGGGCAATCCTCTCAGAGTTTGTCGAAATCCCAGCT
GAAAATAGGGTCCCTCCAGCTGTTCCAGCACCATTATCTGTATCTGTTTG
AGTGGCATTAATATTATCCATACTTGAAATTTCAGCCACTCTTTGAACGC
ATACACTTGAATGTATAATACTCTGTATTCTTGATCAAATGTAAGTAGGA
TTGTACACTAACTCNNNAAAAAAAAAAAAAAAAAAAAAANNANG
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