EY755068

Overview
NameEY755068
Unique NameEY755068
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755068 vs. ExPASy Swiss-Prot
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.485e-62
Identity = 132/253 (52.17%), Postives = 164/253 (64.82%), Query Frame = 3
Query:   90 PKSSFIPNPKLLFST-PFSKTKRCVQRCSKYYNSPSAKSLNHIPKQFREENLQDGLMDNYKNVPRHLYGLTPSQMDMFMTEENPVCRQAASVTEETISSAHHYLNNGGMWSLSGMSDRGPSKYSMSVSMYR--GGGGVYDMXXXXXXXXXXXXXXXRIVYLGMPIVSAVTELFIAQFMWLDFDNASKPIYLYINSSGTQNEKKGNGGTPT*GYAIAGAMGLLKTKV*PVNWGLGYGQTTNASFGGTRGPAGYR 839
            PKS F+   KL  S  P S   R  +R S  + S    S +HIPKQFR +NL+DG+M N+KNVP++ YGL  +QMDMFMTE++PV RQA  VTEE+ISS ++YLNNGG+WS+SGM+     +YSMSV MYR  GGGG  +                RI YLGMPIV AVTEL +AQFMWLD+DN +KPIYLYINS GTQNEK    G+ T  YAIA  +   K+ V  +N G+ +GQ   A+   + G  GYR
Sbjct:   25 PKSPFMSGSKLFSSNMPCSTVPRRTRR-SHCFASAKDMSFDHIPKQFRGDNLKDGVMQNFKNVPQYFYGLNSAQMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAADARRYSMSVQMYRGGGGGGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQ---AAMLLSLGKKGYR 273          
BLAST of EY755068 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.712e-12
Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 3
Query:  549 RIVYLGMPIVSAVTELFIAQFMWLDFDNASKPIYLYINSSGTQNEKKGNGGTPT*GYAIAGAMGLLKTKV*PVNWGLGYGQTTNASFGGTRG 824
            RIVY+GMP+V AVTEL +A+ M+L + +  +PIY+YINS+GT  +     G  + G+AI  ++  LK +V  V  G   GQ       GT+G
Sbjct:  130 RIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKG 221          
BLAST of EY755068 vs. ExPASy Swiss-Prot
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 3
Query:  549 RIVYLGMPIVSAVTELFIAQFMWLDFDNASKPIYLYINSSGTQNEKKGNG-GTPT*GYAIAGAMGLLKTKV*PVNWGLGYGQTTNASFGGTRG 824
            RIVYLGM +V +VTEL +A+F++L +++  KPIYLYINS+GT   K G   G  T  +AI   MG +K  +  +  G  +G+       G +G
Sbjct:  114 RIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGT--TKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKG 204          
The following BLAST results are available for this feature:
BLAST of EY755068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CLPR1_ARATH6.485e-6252.17ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPR3_ARATH4.712e-1242.39ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPR4_ARATH5.210e-1141.94ATP-dependent Clp protease proteolytic subunit-rel... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-023-F01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755068 ID=EY755068; Name=EY755068; organism=Citrus sinensis; type=EST; length=851bp
AAAAACCTTATATCTCTCTAATGGCAACTTCTCTGCTATCTCCACTCTCA
TCACCATCAATAGAGCCACCGGCTCTCACATCTAGCCACCCTAAATCTTC
CTTCATCCCCAACCCCAAGCTCTTGTTCTCGACGCCCTTTTCAAAAACAA
AACGCTGTGTTCAACGATGCTCCAAGTACTACAACTCACCCTCTGCGAAG
TCCCTGAATCATATTCCCAAGCAGTTCAGAGAAGAAAATCTCCAAGATGG
ATTGATGGACAACTACAAGAATGTGCCCCGTCACCTTTATGGCCTTACAC
CTTCACAGATGGACATGTTCATGACAGAAGAGAACCCTGTGTGCCGGCAA
GCAGCGAGTGTAACAGAGGAAACCATTTCTTCTGCCCACCATTATTTGAA
TAATGGGGGGATGTGGAGTCTATCTGGCATGAGTGATAGGGGCCCTTCAA
AGTATAGTATGAGTGTGAGCATGTATCGTGGAGGAGGTGGAGTATATGAT
ATGCCCCAATCTGCTCCTCCTGACTTACCTTCTTTGCTGTTAGATGCTCG
GATTGTCTATCTTGGAATGCCGATTGTATCTGCAGTGACTGAGCTTTTTA
TTGCTCAGTTTATGTGGTTGGATTTTGATAATGCCTCAAAGCCTATATAT
CTATACATAAATTCCTCTGGGACACAGAATGAAAAGAAGGGAAATGGTGG
GACCCCAACCTGAGGCTATGCTATAGCTGGAGCCATGGGCTTACTGAAAA
CAAAAGTCTAACCGGTTAATTGGGGGTTGGGATATGGTCAAACAACAAAT
GCTTCTTTCGGTGGAACAAGGGGTCCCGCGGGTTACCGACAATTTTTCAC
A
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