EY755040

Overview
NameEY755040
Unique NameEY755040
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755040 vs. ExPASy Swiss-Prot
Match: IPT2_ARATH (tRNA isopentenyltransferase 2 OS=Arabidopsis thaliana GN=IPT2 PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.474e-62
Identity = 84/141 (59.57%), Postives = 99/141 (70.21%), Query Frame = 2
Query:   71 GVPHHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDESCFGSLS-GDEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKIKQYLSLYARTGVLPSKLYQGKATE 490
            GVPHHLLGTVS ++EFTA++FRD  VPLI EI+SR+HIP +VGGT+YYIQA+VS FLLDD+AED +E C    S  D+ +                      PVAANRIHPNN+RKI QYLSL+A  GVLPSKLYQGK  E
Sbjct:   74 GVPHHLLGTVSSDMEFTARDFRDFTVPLIEEIVSRNHIPVLVGGTHYYIQAVVSKFLLDDAAEDTEECCADVASVVDQDMVVESVFGRDDLSHGYELLKELDPVAANRIHPNNHRKINQYLSLHASRGVLPSKLYQGKTAE 214          

HSP 2 Score: 100.908 bits (250), Expect = 1.474e-62
Identity = 56/113 (49.56%), Postives = 72/113 (63.72%), Query Frame = 1
Query:  493 QNWGQVDNFRFNCCFICVDAAXPVLDRYVEQRVDCLIXAGLLDEVYDIYNANADYPRGLREAIGVXGV*GFSEHLPFLRQXLQDRWTY*CTSEF*TQDDKTLEDWLKPILIFP 831
            +NWG ++  RF+ C IC+DA   VLDRYVEQRVD ++ AGLLDEVYDIY   ADY RGLR++IGV       E   FL+  L +      TS   + DDK +++ L+ IL FP
Sbjct:  214 ENWGCINASRFDYCLICMDAETAVLDRYVEQRVDAMVDAGLLDEVYDIYKPGADYTRGLRQSIGV------REFEDFLKIHLSETCAGHLTSL--SNDDKVMKENLRKILNFP 318          
BLAST of EY755040 vs. ExPASy Swiss-Prot
Match: MOD5_HUMAN (tRNA isopentenyltransferase, mitochondrial OS=Homo sapiens GN=TRIT1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.689e-16
Identity = 39/138 (28.26%), Postives = 68/138 (49.28%), Query Frame = 2
Query:   80 HHLLGTVSPNV-EFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDESCFGSLSGDEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKIKQYLSLYARTGVLPSKLYQGKATE 490
            HH++  V P V  +T  +FR+ A  LI +I +RD IP +VGGTNYYI++L+   L++   ++M          ++ +                      P  A ++HP++ RK+ + L ++  TG+  S+    + TE
Sbjct:   80 HHMISFVDPLVTNYTVVDFRNRATALIEDIFARDKIPIVVGGTNYYIESLLWKVLVNTKPQEMGT--------EKVIDRKVELEKEDGLVLHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGISHSEFLHRQHTE 209          

HSP 2 Score: 36.965 bits (84), Expect = 7.689e-16
Identity = 20/62 (32.26%), Postives = 34/62 (54.84%), Query Frame = 1
Query:  526 NCCFICVDAAXPVLDRYVEQRVDCLIXAGLLDEVYDIYNA---------NADYPRGLREAIG 684
            N C + + A   VLD  +++RVD ++ AGLL+E+ D +           + DY  G+ ++IG
Sbjct:  223 NPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRDFHRRYNQKNVSENSQDYQHGIFQSIG 284          
BLAST of EY755040 vs. ExPASy Swiss-Prot
Match: MIAA_BACHD (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Bacillus halodurans GN=miaA PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.770e-16
Identity = 45/131 (34.35%), Postives = 63/131 (48.09%), Query Frame = 2
Query:   71 GVPHHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDE----SCFGSLSGDEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKIKQYLSLYARTG 451
            GVPHHL+    P+  F+  +F+D A PLI+EI  R  +PF+VGGT  Y+ A++  F L D   D D       F +  G + +                      P AA  IHPNNYR++ + L +   TG
Sbjct:   57 GVPHHLIDIKDPSESFSVADFQDLATPLITEIHERGRLPFLVGGTGLYVNAVIHQFNLGDIRADEDYRHELEAFVNSYGVQAL--------------HDKLSKIDPKAAAAIHPNNYRRVIRALEIIKLTG 173          

HSP 2 Score: 29.6462 bits (65), Expect = 7.770e-16
Identity = 19/68 (27.94%), Postives = 33/68 (48.53%), Query Frame = 1
Query:  523 FNCCFICVDAAXPVLDRYVEQRVDCLIXAGLLDEVYDIYNANADYPRGLREAIGVXGV*GFSEHLPFL 726
            +N   I +     VL   + +RVD ++  GL+DE   +Y+      RG+R+   V  + G+ E   +L
Sbjct:  190 YNLVMIGLTMERDVLYDRINRRVDQMVEEGLIDEAKKLYD------RGIRDCQSVQAI-GYKEMYDYL 250          
BLAST of EY755040 vs. ExPASy Swiss-Prot
Match: MOD5_MOUSE (tRNA isopentenyltransferase, mitochondrial OS=Mus musculus GN=Trit1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.193e-15
Identity = 42/140 (30.00%), Postives = 69/140 (49.29%), Query Frame = 2
Query:   80 HHLLGTVSPNV-EFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDESCFGSLSGDEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKIKQYLSLYARTGVLPSK-LYQGKATEG 493
            HH++  V P V  +T  +FR+ A  LI +I +RD IP +VGGTNYYI++L+   L+    ++M           + V                      P  A ++HP++ RK+ + L ++  TG+  S+ L++  A EG
Sbjct:   80 HHMISFVDPLVTSYTVVDFRNKATALIEDIFARDKIPIVVGGTNYYIESLLWKVLITTKPQEMGTG--------KVVDRKVELEKEDGHELHKRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGISHSEFLHRQHAEEG 211          

HSP 2 Score: 35.8094 bits (81), Expect = 2.193e-15
Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 1
Query:  526 NCCFICVDAAXPVLDRYVEQRVDCLIXAGLLDEV------YDIYNA---NADYPRGLREAIG 684
            N C + + A   VLD  +++RVD ++ AGLL+E+      Y++ N    + DY  G+ ++IG
Sbjct:  223 NPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRGFHRRYNLKNISENSQDYQHGIFQSIG 284          
BLAST of EY755040 vs. ExPASy Swiss-Prot
Match: MIAA_GEOKA (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Geobacillus kaustophilus GN=miaA PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 3.953e-14
Identity = 45/138 (32.61%), Postives = 65/138 (47.10%), Query Frame = 2
Query:   71 GVPHHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDESCFGSLSGDEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKIKQYLSLYARTGVLPSKLYQGKA 484
            G+PHHLL    P   F+  EF+     LI+EI +R  +P IVGGT  YIQA +  +    SA   DE+   +L                            P++A RIHP+N R++ + L +Y  TG   S+  QG++
Sbjct:   57 GIPHHLLDIKEPCEPFSVVEFQRLCRALITEISARGRLPIIVGGTGLYIQAALYDYQF--SAAPSDEAYRRALK--------QLAAEQGAEALHRRLEAVDPISAARIHPHNIRRVIRALEVYHCTGKPFSEWQQGQS 184          

HSP 2 Score: 34.6538 bits (78), Expect = 3.953e-14
Identity = 23/70 (32.86%), Postives = 34/70 (48.57%), Query Frame = 1
Query:  502 GQVDNFRFNCCFICVDAAXPVLDRYVEQRVDCLIXAGLLDEVYDIYNANADYPRGLREAIGVXGV*GFSE 711
            GQ     +    + + A    L R + +RVD +I AGL++E      A A Y RGLR+   V  + G+ E
Sbjct:  182 GQSKRLLYEAAIVGLTAEREALYRRINERVDEMIAAGLIEE------ARALYDRGLRDCQAVQAI-GYKE 244          
BLAST of EY755040 vs. ExPASy Swiss-Prot
Match: MIAA_ANOFW (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=miaA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.670e-14
Identity = 42/128 (32.81%), Postives = 61/128 (47.66%), Query Frame = 2
Query:   71 GVPHHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDS-AEDMDESCFGSLSGDEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKIKQYLSLYARTG 451
            G+PHHLL    P+  F+  EF+  A  LI +I  R  +P IVGGT  YIQ+++  +   D+ + D+        S DE                        P++A RIHPNN R++ + L +Y  TG
Sbjct:   57 GIPHHLLDIKEPHESFSVAEFQTLARSLIKDITKRGKLPIIVGGTGLYIQSVIYDYQFSDAPSNDLYRQSLERCSPDE---------------LYEQLKQIDPLSAERIHPNNVRRVIRALEIYHCTG 169          

HSP 2 Score: 26.9498 bits (58), Expect = 8.670e-14
Identity = 18/63 (28.57%), Postives = 30/63 (47.62%), Query Frame = 1
Query:  523 FNCCFICVDAAXPVLDRYVEQRVDCLIXAGLLDEVYDIYNANADYPRGLREAIGVXGV*GFSE 711
            +N   I +      L   + QRVD +I  GL++EV  +Y       +GLR+   +  + G+ E
Sbjct:  185 YNVALIGLTMEREKLYARINQRVDQMIDQGLIEEVKRLYE------QGLRDCQAIQAI-GYKE 240          
BLAST of EY755040 vs. ExPASy Swiss-Prot
Match: MIAA_DESRM (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Desulfotomaculum reducens (strain MI-1) GN=miaA PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.178e-13
Identity = 37/131 (28.24%), Postives = 67/131 (51.15%), Query Frame = 2
Query:   62 DFVGVPHHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDESCFGSLSGD-EPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKIKQYLSLYARTG 451
            +  G+PHH++  V+PN EF+   ++     LI++I+ R ++P +VGGT  YI++++  +  D +    D+     L  + E VG                     P +A R+HPN+ R++ + L +Y +TG
Sbjct:   24 EMAGIPHHMIDIVNPNEEFSVATYQSRVEELINQIIDRGNLPLLVGGTGLYIRSVIDHY--DFTTAPKDDRLRECLKREAEQVGAAAMHKKLSEVD---------PQSAERLHPNDLRRVIRALEVYYQTG 143          

HSP 2 Score: 28.8758 bits (63), Expect = 4.178e-13
Identity = 21/65 (32.31%), Postives = 34/65 (52.31%), Query Frame = 1
Query:  505 QVDNFRFNCCFICVDAAXPVLDRYVEQRVDCLIXAGLLDEVYDI---YNANADYPRGL--REAIG 684
            QV+  ++N     +     +L + +EQRVD ++  GLL EV ++   YN      +GL  +E IG
Sbjct:  154 QVEKPKYNLKMFGLTMDRQLLYQRIEQRVDLMMARGLLTEVKELVEQYNGLGTALQGLGYKEIIG 218          
BLAST of EY755040 vs. ExPASy Swiss-Prot
Match: MOD5_SCHPO (tRNA isopentenyltransferase OS=Schizosaccharomyces pombe GN=SPAC343.15 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.173e-12
Identity = 48/165 (29.09%), Postives = 77/165 (46.67%), Query Frame = 2
Query:   74 VPHHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDESCFGSLSGDEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKIKQYLSLYARTGVLPSKLY---QGKATEGRTGAK*TILDSIAALYVLTPXI 559
            V H L+  ++ + E++  EF   A  +I EI S+  IP +VGGT+YY+Q+L    L +D+     +      S  +P  P                    PV A + HP + RKI++ L +Y  TG  PS++Y   + K++  +   K  I  + A   VL P +
Sbjct:   58 VHHRLMSFLNFDKEYSVPEFERDASRVIDEIHSQGKIPIVVGGTHYYLQSL----LFEDTTLSAIDKLTNDSSPSKPPHPDSHILDDDPSAMLSYLKKIDPVMAEQWHPRDTRKIRRSLEIYFHTGRPPSEIYSEQKMKSSGSKLRYKSLIFWAFADSLVLMPRL 218          

HSP 2 Score: 26.1794 bits (56), Expect = 1.173e-12
Identity = 17/60 (28.33%), Postives = 32/60 (53.33%), Query Frame = 1
Query:  562 VLDRYVEQRVDCLIXAGLLDEVYDIYNA------NADYPRGLREAIGVXGV*GFSEHLPF 723
            VL   +++RVD ++  GL+DE+  + +       + D+ RG+ + I      GF E +P+
Sbjct:  213 VLMPRLDKRVDKMLSHGLVDEIKSMKSLAESEKFSPDFTRGIWQCI------GFKEFMPW 266          
BLAST of EY755040 vs. ExPASy Swiss-Prot
Match: MIAA_OCEIH (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Oceanobacillus iheyensis GN=miaA PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.370e-12
Identity = 41/141 (29.08%), Postives = 70/141 (49.65%), Query Frame = 2
Query:   71 GVPHHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAEDMDESCFGSLSG-DEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKIKQYLSLYARTGVLPSKLYQGKATE 490
            G+ HH++  +SP+  F+  +F+  A   I ++L R  +P +VGG+  YIQA++  +  + S +  DES    L    E  GP                    PV A ++HPNN+R++ + L +Y  TG+  ++  Q +  E
Sbjct:   57 GIMHHMIDIISPDESFSVADFQLHAKKCIDDVLGRGKLPILVGGSGLYIQAVL--YNYNFSEQRRDESFTKKLEEIIEEEGP---------NQLYTRLKEVDPVQAAKVHPNNHRRLIRALEVYETTGMTMTEYQQQQQLE 186          

HSP 2 Score: 27.7202 bits (60), Expect = 3.370e-12
Identity = 14/38 (36.84%), Postives = 22/38 (57.89%), Query Frame = 1
Query:  523 FNCCFICVDAAXPVLDRYVEQRVDCLIXAGLLDEVYDI 636
            ++   I +D    VL   + QRVD +I  GL++EV D+
Sbjct:  189 YHLILIGLDMDRDVLYDRINQRVDHMIDTGLIEEVRDL 226          
BLAST of EY755040 vs. ExPASy Swiss-Prot
Match: MIAA_BACLD (tRNA Delta(2)-isopentenylpyrophosphate transferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=miaA PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 9.580e-12
Identity = 43/144 (29.86%), Postives = 64/144 (44.44%), Query Frame = 2
Query:   71 GVPHHLLGTVSPNVEFTAKEFRDSAVPLISEILSRDHIPFIVGGTNYYIQALVSPFLLDDSAED----MDESCFGSLSGDEPVGPXXXXXXXXXXXXXXXXXXXXPVAANRIHPNNYRKIKQYLSLYARTGVLPSKLYQGKATE 490
            GVPHHL+    P   F+  E+++     I+EI  R  +P IVGGT  YIQ+++  +   + A D     +   F +  G E V                      P AA  IHPNN R++ + L +   TG   S+  +G+  E
Sbjct:   60 GVPHHLIDIKEPTESFSVAEYQEIVRQKIAEIDRRGKLPMIVGGTGLYIQSVLYDYSFTEEAGDPEFRAEMEAFSAKRGAEYV--------------HDLLKERDPEAARAIHPNNKRRVIRALEILHTTGKTMSEHMEGQRKE 189          

HSP 2 Score: 27.335 bits (59), Expect = 9.580e-12
Identity = 16/49 (32.65%), Postives = 23/49 (46.94%), Query Frame = 1
Query:  502 GQVDNFRFNCCFICVDAAXPVLDRYVEQRVDCLIXAGLLDEVYDIYNAN 648
            GQ     +    I +     VL   +  RVD ++  GLLDEV  +Y+ N
Sbjct:  185 GQRKELLYTTALIGLTMEREVLYDRINSRVDQMMDEGLLDEVKLLYDEN 233          
The following BLAST results are available for this feature:
BLAST of EY755040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
IPT2_ARATH1.474e-6259.57tRNA isopentenyltransferase 2 OS=Arabidopsis thali... [more]
MOD5_HUMAN7.689e-1628.26tRNA isopentenyltransferase, mitochondrial OS=Homo... [more]
MIAA_BACHD7.770e-1634.35tRNA Delta(2)-isopentenylpyrophosphate transferase... [more]
MOD5_MOUSE2.193e-1530.00tRNA isopentenyltransferase, mitochondrial OS=Mus ... [more]
MIAA_GEOKA3.953e-1432.61tRNA Delta(2)-isopentenylpyrophosphate transferase... [more]
MIAA_ANOFW8.670e-1432.81tRNA Delta(2)-isopentenylpyrophosphate transferase... [more]
MIAA_DESRM4.178e-1328.24tRNA Delta(2)-isopentenylpyrophosphate transferase... [more]
MOD5_SCHPO1.173e-1229.09tRNA isopentenyltransferase OS=Schizosaccharomyces... [more]
MIAA_OCEIH3.370e-1229.08tRNA Delta(2)-isopentenylpyrophosphate transferase... [more]
MIAA_BACLD9.580e-1229.86tRNA Delta(2)-isopentenylpyrophosphate transferase... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-023-C03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755040 ID=EY755040; Name=EY755040; organism=Citrus sinensis; type=EST; length=891bp
TTTTTGTGTTATTGTGATGTTCAGTTGTGTTTTTGGTTTAAATGGGTTCT
GTTTGTCATGTGATTTTGTAGGAGTGCCACACCATCTTCTAGGGACCGTG
AGCCCCAACGTGGAATTTACTGCTAAAGAGTTTCGAGATTCTGCTGTTCC
TCTTATCAGTGAGATATTATCACGTGATCACATACCATTCATTGTTGGGG
GTACAAACTACTATATTCAGGCTCTTGTGAGTCCATTTCTTCTAGATGAT
TCAGCAGAAGATATGGATGAAAGCTGCTTTGGCAGCCTTTCTGGGGATGA
GCCGGTTGGTCCTGACTCTGACTTAGCAAGAGACAGTTCTAGCTACAGTT
ATGACCTCCTCAAAGACCTTGACCCAGTTGCAGCAAACAGAATTCATCCA
AATAACTATAGAAAAATCAAACAATACCTTAGCTTGTATGCACGCACTGG
AGTTCTCCCTAGCAAACTTTATCAAGGAAAAGCCACTGAGGGCAGAACTG
GGGCCAAGTAGACAATTTTAGATTCAATTGCTGCTTTATATGTGTTGACG
CCGCANATCCTGTGCTCGACCGATATGTGGAACAAAGAGTTGACTGCCTG
ATANATGCTGGATTGCTTGATGAGGTGTATGACATTTACAATGCGAATGC
TGATTATCCCAGAGGTCTGCGGGAGGCCATAGGTGTTCNGGGAGTTTGAG
GATTTTCTGAGCATTTACCATTCTTGCGGCAGANATTACAAGACAGGTGG
ACCTACTAATGCACCTCTGAATTTTAGACCCAGGATGACAAGACCTTGGA
AGACTGGTTGAAACCAATCTTAATCTTCCCGTGTGAACACTTAAATTCTT
TTTAAAGAGGCCTTGGTCGGGTAAATAAACCCAAAGAATTG
back to top