EY755038
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: POLH_HUMAN (DNA polymerase eta OS=Homo sapiens GN=POLH PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.613e-45 Identity = 72/123 (58.54%), Postives = 91/123 (73.98%), Query Frame = 1 Query: 103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILARKGRCERASIDEVYLDLTDAAEAML 471 R++A VD+DCF+VQVEQR+ P LR P AVVQY WKGGG+IAV YEAR +GV RSM D+AK++CP + L QV +RGKA+L+ YR A EV+ I++R ERASIDE Y+DLT A + L Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVDLTSAVQERL 129 HSP 2 Score: 56.225 bits (134), Expect = 1.613e-45 Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 3 Query: 549 VQDGNDSKATVKEWLCRCDADHR---DKLLTWGVLIVTELRIAVLKETELLCFGGNGHNKRLAKLARGMNKPGQKLVCPSHPEGATRF--MANKKMKHLVGNLAHSYKEIGG 869 VQ K + +WL D+ D LT G +IV E+R A+ +ET C G HNK LAKLA G+NKP ++ + SH F M +K++ L G L S EI G Sbjct: 161 VQKEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLV-SHGSVPQLFSQMPIRKIRSLGGKLGASVIEILG 271
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: POLH_MOUSE (DNA polymerase eta OS=Mus musculus GN=Polh PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.116e-43 Identity = 70/123 (56.91%), Postives = 90/123 (73.17%), Query Frame = 1 Query: 103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILARKGRCERASIDEVYLDLTDAAEAML 471 R++A VD+DCF+VQVEQR+ P LR P AVVQY WKGGG+IAV YEAR +GV R+M D+AK++CP + L QV +RGKA+L+ YR A EV+ I++ ERASIDE Y+DLT A + L Sbjct: 7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRNMWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSYFAVIERASIDEAYIDLTSAVQERL 129 HSP 2 Score: 53.5286 bits (127), Expect = 1.116e-43 Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 3 Query: 570 KATVKEWLCRCDADHR---DKLLTWGVLIVTELRIAVLKETELLCFGGNGHNKRLAKLARGMNKPGQKLVCPSHPEGATRF--MANKKMKHLVGNLAHSYKEIGG 869 K + +WL +D D LT G +IV E+R A+ +T C G HNK LAKLA G+NKP ++ + SH F M +K++ L G L S E+ G Sbjct: 167 KQGLLQWLDSLQSDDPTSPDLRLTVGAMIVEEMRAAIESKTGFQCSAGISHNKVLAKLACGLNKPNRQTLV-SHGSVPQLFSQMPIRKIRSLGGKLGASVIEVLG 270
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: POLI_HUMAN (DNA polymerase iota OS=Homo sapiens GN=POLI PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.912e-19 Identity = 53/153 (34.64%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 91 SSGARIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTDAAEAMLAETPPESLDEVNEEALKSHILGLES 546 ++ +R+I HVDLDCFY QVE P+L+ P V Q ++ YEAR GVK+ M +AKE CPQ+ LV DL+ YR +V +L ER DE ++DLT+ E L + DE++ + H+ +S Sbjct: 24 NASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVRDAKEKCPQLVLV------NGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQL---QSDELSAVTVSGHVYNNQS 162 HSP 2 Score: 33.4982 bits (75), Expect = 4.912e-19 Identity = 26/78 (33.33%), Postives = 36/78 (46.15%), Query Frame = 3 Query: 636 GVLIVTELRIAVLKETELLCFGGNGHNKRLAKLARGMNKPGQKLVCPSHPEGATRFMANKKMKHLVGNLAHSYKEIGG 869 G I E+R A+ + L G NK LAKL G+ KP Q+ V + + +HL+ +L H KEI G Sbjct: 176 GSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTV-----------LLPESCQHLIHSLNH-IKEIPG 241
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: POLI_MOUSE (DNA polymerase iota OS=Mus musculus GN=Poli PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.149e-17 Identity = 64/186 (34.41%), Postives = 88/186 (47.31%), Query Frame = 1 Query: 94 SGARIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTDAAEAMLAETPPESLDEV-------NEEALKSH-------ILGLESKFRM-EMTPKQL*RSGCVGV 603 S +R+I HVDLDCFY QVE P+L+ P V Q ++ YEAR GV++ M +AKE CPQ+ LV DLS YR +V +L ER DE ++DLT+ E L + P E + V N +++ H ++G + M E QL +GC GV Sbjct: 25 SSSRVIVHVDLDCFYAQVEMISNPELKDRPLGVQQKYL-----VVTCNYEARKLGVRKLMNVRDAKEKCPQLVLV------NGEDLSRYREMSYKVTELLEEFSPAVERLGFDENFVDLTEMVEKRLQQLPSEEVPSVTVFGHVYNNQSVNLHNIMHRRLVVGSQIAAEMREAMYNQLGLTGCAGV 199
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: DPO4_BACCR (DNA polymerase IV OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dinB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.651e-15 Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTD 453 R+I HVD++CF+ VE P L+G P AV + + G +I YEAR YG++ +M EAK +CPQ+ V R + + + YR A ++ +L+R + + SIDE YLD+TD Sbjct: 13 RVILHVDMNCFFASVEIAHDPSLQGKPLAVAGNEKERKGIIITCSYEAREYGIRTTMPLWEAKRLCPQL------VVR-RPNFTLYREASFQMFQVLSRFTEKIQPVSIDEGYLDITD 123
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: DPO4_BACCZ (DNA polymerase IV OS=Bacillus cereus (strain ZK / E33L) GN=dinB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14 Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTD 453 R+I HVD++CF+ VE L+G P AV + + G +I YEAR YG++ +M EAK +CPQ+ +V+ P + + YR A ++ IL+R + + SIDE YLD+TD Sbjct: 13 RVILHVDMNCFFASVEIAHDSSLQGKPLAVAGNEKERKGIIITCSYEAREYGIRTTMPLWEAKRLCPQL-IVRRP------NFTLYREASFQMFQILSRFTEKIQPVSIDEGYLDITD 123
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: DPO4_BACAN (DNA polymerase IV OS=Bacillus anthracis GN=dinB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14 Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTD 453 R+I HVD++CF+ VE L+G P AV + + G +I YEAR YG++ +M EAK +CPQ+ +V+ P + + YR A ++ IL+R + + SIDE YLD+TD Sbjct: 10 RVILHVDMNCFFASVEIAHDSSLQGKPLAVAGNEKERKGIIITCSYEAREYGIRTTMPLWEAKRLCPQL-IVRRP------NFTLYREASFQMFQILSRFTEKIQPVSIDEGYLDITD 120
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: DPO4_BACA2 (DNA polymerase IV OS=Bacillus amyloliquefaciens (strain FZB42) GN=dinB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14 Identity = 57/157 (36.31%), Postives = 81/157 (51.59%), Query Frame = 1 Query: 103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTDAAEAMLA-ETPPESLDEVNEEALKSHILGL-ESKFRMEM 564 RII H+D++ FY VE P LRG P AV + + G ++ YEAR GVK +M AK +CP EL+ VP + YR++ E+ SIL E SIDE Y+D+TD + A ET + + +E L +G+ +KF +M Sbjct: 6 RIIFHIDMNSFYASVEMAYDPSLRGKPIAVAGNVKERKGIIVTCSYEARARGVKTTMPVWRAKRLCP--ELIVVP-----PNFDRYRSSSKEMFSILREYTDLVEPVSIDEGYMDITDTPHSHRAYETAEDIQARLQKELLLPSSIGIAPNKFLAKM 155
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: DPO4_OCEIH (DNA polymerase IV OS=Oceanobacillus iheyensis GN=dinB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.608e-14 Identity = 45/122 (36.89%), Postives = 66/122 (54.10%), Query Frame = 1 Query: 103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTDAAEA 465 RII H+D++CFY VE P L+G P A+ E + G ++ YEAR GVK +M +AK++CP + L+ + + YR A E+ +LA + SIDE Y+D+TD A Sbjct: 10 RIIFHIDMNCFYASVEMAHNPSLKGKPLAIAGNPEERKGIIVTSSYEARGKGVKTTMPIWQAKKLCPDLILM-------RPNFDRYRAASREIFKMLAEITPYVQPVSIDEGYMDITDTIYA 124
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: DPO4_METMJ (DNA polymerase IV OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=dbh PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.608e-14 Identity = 55/147 (37.41%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 91 SSGARIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGG---GLIAV-GYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTDAAEAMLAETPPESLD-EVNEE 513 ++G+RI+ HVD+D F+ +E R+ P L G P V+ + KGG G+++ YEAR YGV M A ++CP V +PV D Y + E++++L+R GR E+ SIDE YLD++DA A ++ EV EE Sbjct: 2 TTGSRIVLHVDMDSFFASIEVRRDPSLAGRP--VIVGADPKGGAGRGVVSTCSYEARRYGVHSGMPISRAFDLCP--HGVYLPV-----DRPFYASVSVEIMALLSRHAGRIEQVSIDEAYLDVSDAGSFPAAGALAAAIKREVREE 139 The following BLAST results are available for this feature:
BLAST of EY755038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >EY755038 ID=EY755038; Name=EY755038; organism=Citrus sinensis; type=EST; length=907bpback to top |