EY755038

Overview
NameEY755038
Unique NameEY755038
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: POLH_HUMAN (DNA polymerase eta OS=Homo sapiens GN=POLH PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.613e-45
Identity = 72/123 (58.54%), Postives = 91/123 (73.98%), Query Frame = 1
Query:  103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILARKGRCERASIDEVYLDLTDAAEAML 471
            R++A VD+DCF+VQVEQR+ P LR  P AVVQY  WKGGG+IAV YEAR +GV RSM  D+AK++CP + L QV  +RGKA+L+ YR A  EV+ I++R    ERASIDE Y+DLT A +  L
Sbjct:    7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVDLTSAVQERL 129          

HSP 2 Score: 56.225 bits (134), Expect = 1.613e-45
Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 3
Query:  549 VQDGNDSKATVKEWLCRCDADHR---DKLLTWGVLIVTELRIAVLKETELLCFGGNGHNKRLAKLARGMNKPGQKLVCPSHPEGATRF--MANKKMKHLVGNLAHSYKEIGG 869
            VQ     K  + +WL     D+    D  LT G +IV E+R A+ +ET   C  G  HNK LAKLA G+NKP ++ +  SH      F  M  +K++ L G L  S  EI G
Sbjct:  161 VQKEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLV-SHGSVPQLFSQMPIRKIRSLGGKLGASVIEILG 271          
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: POLH_MOUSE (DNA polymerase eta OS=Mus musculus GN=Polh PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.116e-43
Identity = 70/123 (56.91%), Postives = 90/123 (73.17%), Query Frame = 1
Query:  103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILARKGRCERASIDEVYLDLTDAAEAML 471
            R++A VD+DCF+VQVEQR+ P LR  P AVVQY  WKGGG+IAV YEAR +GV R+M  D+AK++CP + L QV  +RGKA+L+ YR A  EV+ I++     ERASIDE Y+DLT A +  L
Sbjct:    7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRNMWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSYFAVIERASIDEAYIDLTSAVQERL 129          

HSP 2 Score: 53.5286 bits (127), Expect = 1.116e-43
Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 3
Query:  570 KATVKEWLCRCDADHR---DKLLTWGVLIVTELRIAVLKETELLCFGGNGHNKRLAKLARGMNKPGQKLVCPSHPEGATRF--MANKKMKHLVGNLAHSYKEIGG 869
            K  + +WL    +D     D  LT G +IV E+R A+  +T   C  G  HNK LAKLA G+NKP ++ +  SH      F  M  +K++ L G L  S  E+ G
Sbjct:  167 KQGLLQWLDSLQSDDPTSPDLRLTVGAMIVEEMRAAIESKTGFQCSAGISHNKVLAKLACGLNKPNRQTLV-SHGSVPQLFSQMPIRKIRSLGGKLGASVIEVLG 270          
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: POLI_HUMAN (DNA polymerase iota OS=Homo sapiens GN=POLI PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.912e-19
Identity = 53/153 (34.64%), Postives = 76/153 (49.67%), Query Frame = 1
Query:   91 SSGARIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTDAAEAMLAETPPESLDEVNEEALKSHILGLES 546
            ++ +R+I HVDLDCFY QVE    P+L+  P  V Q        ++   YEAR  GVK+ M   +AKE CPQ+ LV         DL+ YR    +V  +L       ER   DE ++DLT+  E  L +      DE++   +  H+   +S
Sbjct:   24 NASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL-----VVTCNYEARKLGVKKLMNVRDAKEKCPQLVLV------NGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQL---QSDELSAVTVSGHVYNNQS 162          

HSP 2 Score: 33.4982 bits (75), Expect = 4.912e-19
Identity = 26/78 (33.33%), Postives = 36/78 (46.15%), Query Frame = 3
Query:  636 GVLIVTELRIAVLKETELLCFGGNGHNKRLAKLARGMNKPGQKLVCPSHPEGATRFMANKKMKHLVGNLAHSYKEIGG 869
            G  I  E+R A+  +  L    G   NK LAKL  G+ KP Q+ V           +  +  +HL+ +L H  KEI G
Sbjct:  176 GSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTV-----------LLPESCQHLIHSLNH-IKEIPG 241          
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: POLI_MOUSE (DNA polymerase iota OS=Mus musculus GN=Poli PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.149e-17
Identity = 64/186 (34.41%), Postives = 88/186 (47.31%), Query Frame = 1
Query:   94 SGARIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTDAAEAMLAETPPESLDEV-------NEEALKSH-------ILGLESKFRM-EMTPKQL*RSGCVGV 603
            S +R+I HVDLDCFY QVE    P+L+  P  V Q        ++   YEAR  GV++ M   +AKE CPQ+ LV         DLS YR    +V  +L       ER   DE ++DLT+  E  L + P E +  V       N +++  H       ++G +    M E    QL  +GC GV
Sbjct:   25 SSSRVIVHVDLDCFYAQVEMISNPELKDRPLGVQQKYL-----VVTCNYEARKLGVRKLMNVRDAKEKCPQLVLV------NGEDLSRYREMSYKVTELLEEFSPAVERLGFDENFVDLTEMVEKRLQQLPSEEVPSVTVFGHVYNNQSVNLHNIMHRRLVVGSQIAAEMREAMYNQLGLTGCAGV 199          
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: DPO4_BACCR (DNA polymerase IV OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dinB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.651e-15
Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 1
Query:  103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTD 453
            R+I HVD++CF+  VE    P L+G P AV    + + G +I   YEAR YG++ +M   EAK +CPQ+      V R + + + YR A  ++  +L+R   + +  SIDE YLD+TD
Sbjct:   13 RVILHVDMNCFFASVEIAHDPSLQGKPLAVAGNEKERKGIIITCSYEAREYGIRTTMPLWEAKRLCPQL------VVR-RPNFTLYREASFQMFQVLSRFTEKIQPVSIDEGYLDITD 123          
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: DPO4_BACCZ (DNA polymerase IV OS=Bacillus cereus (strain ZK / E33L) GN=dinB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14
Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 1
Query:  103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTD 453
            R+I HVD++CF+  VE      L+G P AV    + + G +I   YEAR YG++ +M   EAK +CPQ+ +V+ P      + + YR A  ++  IL+R   + +  SIDE YLD+TD
Sbjct:   13 RVILHVDMNCFFASVEIAHDSSLQGKPLAVAGNEKERKGIIITCSYEAREYGIRTTMPLWEAKRLCPQL-IVRRP------NFTLYREASFQMFQILSRFTEKIQPVSIDEGYLDITD 123          
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: DPO4_BACAN (DNA polymerase IV OS=Bacillus anthracis GN=dinB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14
Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 1
Query:  103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTD 453
            R+I HVD++CF+  VE      L+G P AV    + + G +I   YEAR YG++ +M   EAK +CPQ+ +V+ P      + + YR A  ++  IL+R   + +  SIDE YLD+TD
Sbjct:   10 RVILHVDMNCFFASVEIAHDSSLQGKPLAVAGNEKERKGIIITCSYEAREYGIRTTMPLWEAKRLCPQL-IVRRP------NFTLYREASFQMFQILSRFTEKIQPVSIDEGYLDITD 120          
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: DPO4_BACA2 (DNA polymerase IV OS=Bacillus amyloliquefaciens (strain FZB42) GN=dinB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14
Identity = 57/157 (36.31%), Postives = 81/157 (51.59%), Query Frame = 1
Query:  103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTDAAEAMLA-ETPPESLDEVNEEALKSHILGL-ESKFRMEM 564
            RII H+D++ FY  VE    P LRG P AV    + + G ++   YEAR  GVK +M    AK +CP  EL+ VP      +   YR++  E+ SIL       E  SIDE Y+D+TD   +  A ET  +    + +E L    +G+  +KF  +M
Sbjct:    6 RIIFHIDMNSFYASVEMAYDPSLRGKPIAVAGNVKERKGIIVTCSYEARARGVKTTMPVWRAKRLCP--ELIVVP-----PNFDRYRSSSKEMFSILREYTDLVEPVSIDEGYMDITDTPHSHRAYETAEDIQARLQKELLLPSSIGIAPNKFLAKM 155          
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: DPO4_OCEIH (DNA polymerase IV OS=Oceanobacillus iheyensis GN=dinB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.608e-14
Identity = 45/122 (36.89%), Postives = 66/122 (54.10%), Query Frame = 1
Query:  103 RIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGGGLIAVGYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTDAAEA 465
            RII H+D++CFY  VE    P L+G P A+    E + G ++   YEAR  GVK +M   +AK++CP + L+       + +   YR A  E+  +LA      +  SIDE Y+D+TD   A
Sbjct:   10 RIIFHIDMNCFYASVEMAHNPSLKGKPLAIAGNPEERKGIIVTSSYEARGKGVKTTMPIWQAKKLCPDLILM-------RPNFDRYRAASREIFKMLAEITPYVQPVSIDEGYMDITDTIYA 124          
BLAST of EY755038 vs. ExPASy Swiss-Prot
Match: DPO4_METMJ (DNA polymerase IV OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=dbh PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.608e-14
Identity = 55/147 (37.41%), Postives = 82/147 (55.78%), Query Frame = 1
Query:   91 SSGARIIAHVDLDCFYVQVEQRKQPKLRGLPTAVVQYNEWKGG---GLIAV-GYEARNYGVKRSMRGDEAKEVCPQIELVQVPVARGKADLSSYRNAGSEVVSILAR-KGRCERASIDEVYLDLTDAAEAMLAETPPESLD-EVNEE 513
            ++G+RI+ HVD+D F+  +E R+ P L G P  V+   + KGG   G+++   YEAR YGV   M    A ++CP    V +PV     D   Y +   E++++L+R  GR E+ SIDE YLD++DA     A     ++  EV EE
Sbjct:    2 TTGSRIVLHVDMDSFFASIEVRRDPSLAGRP--VIVGADPKGGAGRGVVSTCSYEARRYGVHSGMPISRAFDLCP--HGVYLPV-----DRPFYASVSVEIMALLSRHAGRIEQVSIDEAYLDVSDAGSFPAAGALAAAIKREVREE 139          
The following BLAST results are available for this feature:
BLAST of EY755038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
POLH_HUMAN1.613e-4558.54DNA polymerase eta OS=Homo sapiens GN=POLH PE=1 SV... [more]
POLH_MOUSE1.116e-4356.91DNA polymerase eta OS=Mus musculus GN=Polh PE=1 SV... [more]
POLI_HUMAN4.912e-1934.64DNA polymerase iota OS=Homo sapiens GN=POLI PE=1 S... [more]
POLI_MOUSE4.149e-1734.41DNA polymerase iota OS=Mus musculus GN=Poli PE=1 S... [more]
DPO4_BACCR8.651e-1538.98DNA polymerase IV OS=Bacillus cereus (strain ATCC ... [more]
DPO4_BACCZ4.294e-1438.98DNA polymerase IV OS=Bacillus cereus (strain ZK / ... [more]
DPO4_BACAN4.294e-1438.98DNA polymerase IV OS=Bacillus anthracis GN=dinB PE... [more]
DPO4_BACA24.294e-1436.31DNA polymerase IV OS=Bacillus amyloliquefaciens (s... [more]
DPO4_OCEIH5.608e-1436.89DNA polymerase IV OS=Oceanobacillus iheyensis GN=d... [more]
DPO4_METMJ5.608e-1437.41DNA polymerase IV OS=Methanoculleus marisnigri (st... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-023-C01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755038 ID=EY755038; Name=EY755038; organism=Citrus sinensis; type=EST; length=907bp
CGCCTGCCGGTATTGGTCCGGNATTCCCGGCTCGACCCCGCGTCCGGGGA
AAGAAGGGCAGGAAGAGAAATGCCAGTGGCGAGACCAGATTCTTCTGGTG
CACGGATCATTGCTCACGTCGACTTGGACTGCTTCTACGTTCAAGTGGAG
CAGAGGAAGCAACCAAAGTTAAGAGGCTTACCTACTGCTGTGGTACAGTA
CAATGAGTGGAAAGGTGGGGGCTTGATTGCTGTTGGCTATGAGGCCCGTA
ATTATGGTGTGAAGCGTTCAATGAGAGGTGATGAGGCGAAGGAAGTTTGT
CCACAAATTGAGCTAGTCCAAGTCCCGGTAGCCCGTGGTAAAGCTGATTT
GAGTTCATACCGTAATGCTGGTTCAGAGGTGGTCTCCATTCTTGCTAGGA
AGGGCCGATGTGAGAGGGCTTCTATTGATGAAGTGTATCTTGACCTTACT
GACGCTGCAGAAGCTATGCTAGCAGAAACTCCTCCAGAAAGCTTGGATGA
AGTAAATGAGGAAGCTCTTAAATCACATATTTTGGGGCTTGAAAGCAAGT
TCAGGATGGAAATGACTCCAAAGCAACTGTGAAGGAGTGGCTGTGTAGGT
GTGATGCTGATCATCGTGATAAGTTATTAACTTGGGGTGTTCTTATTGTT
ACAGAGCTTAGGATTGCAGTTCTAAAGGAGACTGAATTACTTTGTTTTGG
TGGAAATGGTCATAATAAGAGGCTGGCTAAACTTGCAAGGGGGATGAATA
AACCTGGCCAAAAACTAGTGTGCCCTTCTCATCCGGAAGGGGCTACTCGA
TTCATGGCCAATAAAAAAATGAAACATCTGGTGGGAAACTTGGCACATTC
TTACAAAGAAATTGGGGGTTCCCCGGTGGAGAATCTTTGAAATTTCAAAG
GTGAGCT
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