EY729727

Overview
NameEY729727
Unique NameEY729727
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729727 vs. ExPASy Swiss-Prot
Match: Y846_PSEPF (UPF0307 protein Pfl01_0846 OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pfl01_0846 PE=3 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 9.981e-59
Identity = 125/161 (77.64%), Postives = 128/161 (79.50%), Query Frame = 2
Query:  239 MVDSYDDSLD-GEKSKSQVKRELHALVDLGERLTTLKPDLCAKLPLTDALRRALNDAPKHTANIARKRHLMFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERGRDRLIAGDDAVLGEVRHRVPGCRSPTIALPDPSGPARTGAKQATASSRKIFK 718
            MVDSYDDSLD GEKSKSQVKRELHALVDLGERLTTLKPDL AKLPLTDALRRAL DAPKHTANIARKRHL FIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLER RDRLIAGDDAVL +     P      +              +  ASSRKIFK
Sbjct:    1 MVDSYDDSLDTGEKSKSQVKRELHALVDLGERLTTLKPDLQAKLPLTDALRRALADAPKHTANIARKRHLQFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERWRDRLIAGDDAVLEKFVVDYPDADRQQLRSLIRQAQHEVAQNKPPASSRKIFK 161          
BLAST of EY729727 vs. ExPASy Swiss-Prot
Match: Y904_PSEF5 (UPF0307 protein PFL_0904 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_0904 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.593e-56
Identity = 119/160 (74.38%), Postives = 123/160 (76.88%), Query Frame = 2
Query:  239 MVDSYDDSLDGEKSKSQVKRELHALVDLGERLTTLKPDLCAKLPLTDALRRALNDAPKHTANIARKRHLMFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERGRDRLIAGDDAVLGEVRHRVPGCRSPTIALPDPSGPARTGAKQATASSRKIFK 718
            MVDSYDDSLDGEKSKSQVKRELHALVDLGERLTTLKPDL  KLPLTDALRRAL DAPKH A+IARKRHL FIGKLMRDQDTDAIL LLDQLDASTRQYNERFHNLER RDRLI G D VL +     P      +              +A ASSRKIFK
Sbjct:    1 MVDSYDDSLDGEKSKSQVKRELHALVDLGERLTTLKPDLLNKLPLTDALRRALADAPKHVAHIARKRHLQFIGKLMRDQDTDAILQLLDQLDASTRQYNERFHNLERWRDRLIGGGDDVLEKFVGEYPDADRQQLRSLIRQAQHELAHNKAPASSRKIFK 160          
BLAST of EY729727 vs. ExPASy Swiss-Prot
Match: Y4464_PSESM (UPF0307 protein PSPTO_4464 OS=Pseudomonas syringae pv. tomato GN=PSPTO_4464 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.005e-55
Identity = 114/160 (71.25%), Postives = 125/160 (78.12%), Query Frame = 2
Query:  239 MVDSYDDSLDGEKSKSQVKRELHALVDLGERLTTLKPDLCAKLPLTDALRRALNDAPKHTANIARKRHLMFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERGRDRLIAGDDAVLGEVRHRVPGCRSPTIALPDPSGPARTGAKQATASSRKIFK 718
            MVDSYDDSLDGEKSK+QVKRELHALVDLGERLTTLK D+ AKLPLTDALR+AL +APKHTANIARKRH++FIGKLMRDQD +AIL LLDQLDASTRQYNERFHNLER RDRLIAGDDA L +     P      +              +  A+SRKIFK
Sbjct:    1 MVDSYDDSLDGEKSKTQVKRELHALVDLGERLTTLKADVLAKLPLTDALRKALAEAPKHTANIARKRHILFIGKLMRDQDQEAILVLLDQLDASTRQYNERFHNLERWRDRLIAGDDADLEKFVIEYPDADRQQLRSLIRQAQHEVARNKPPATSRKIFK 160          
BLAST of EY729727 vs. ExPASy Swiss-Prot
Match: Y864_PSEMY (UPF0307 protein Pmen_0864 OS=Pseudomonas mendocina (strain ymp) GN=Pmen_0864 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.751e-51
Identity = 95/124 (76.61%), Postives = 104/124 (83.87%), Query Frame = 2
Query:  239 MVDSYDDSLDGEKSKSQVKRELHALVDLGERLTTLKPDLCAKLPLTDALRRALNDAPKHTANIARKRHLMFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERGRDRLIA-GDDAVLGEV 607
            M DSYDD    EKSKSQVKRELHAL DLGERLTTLK DL AKLPLTDALRRAL +APKHTAN ARKRH+ FIGKLMR+QD +AIL L+DQ+D+STR+YNERFH LER RDRLI  GD A+ G V
Sbjct:    1 MSDSYDD-FSLEKSKSQVKRELHALQDLGERLTTLKADLLAKLPLTDALRRALAEAPKHTANAARKRHIQFIGKLMREQDIEAILALIDQVDSSTREYNERFHALERWRDRLIGEGDSALEGFV 123          

HSP 2 Score: 47.7506 bits (112), Expect = 1.751e-51
Identity = 24/37 (64.86%), Postives = 25/37 (67.57%), Query Frame = 3
Query:  600 EKFVIEYPDADRQQLRSLIRQAQHELAQSKPRPPAEK 710
            E FV  YPDADRQ LR LIR AQHE A +KP   A K
Sbjct:  120 EGFVELYPDADRQHLRGLIRHAQHEAAHNKPPAAARK 156          
BLAST of EY729727 vs. ExPASy Swiss-Prot
Match: Y4274_PSEPW (UPF0307 protein PputW619_4274 OS=Pseudomonas putida (strain W619) GN=PputW619_4274 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.071e-44
Identity = 93/160 (58.13%), Postives = 116/160 (72.50%), Query Frame = 2
Query:  239 MVDSYDDSLDGEKSKSQVKRELHALVDLGERLTTLKPDLCAKLPLTDALRRALNDAPKHTANIARKRHLMFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERGRDRLIAGDDAVLGEVRHRVPGCRSPTIALPDPSGPARTGAKQATASSRKIFK 718
            MVDSYDD+ DGEKSK+Q+KRELHALV+LGERLTT+K D  A+LPLTD LR+AL +A KHTA+ ARKRH+ F+GKLMRDQD DAI  +L+Q+D+S+RQYNERFHNLER RDRLI G+D  L    +  P      +              +  A++RK+FK
Sbjct:    1 MVDSYDDAFDGEKSKTQIKRELHALVELGERLTTVKADTLARLPLTDELRKALAEACKHTAHGARKRHMSFVGKLMRDQDLDAIHAVLEQIDSSSRQYNERFHNLERWRDRLIDGNDEDLERFVNEYPDTDRQQLRSLIRHAQHEKARNKPPAAARKVFK 160          
BLAST of EY729727 vs. ExPASy Swiss-Prot
Match: Y981_PSEP1 (UPF0307 protein Pput_0981 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=Pput_0981 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.020e-43
Identity = 93/160 (58.13%), Postives = 114/160 (71.25%), Query Frame = 2
Query:  239 MVDSYDDSLDGEKSKSQVKRELHALVDLGERLTTLKPDLCAKLPLTDALRRALNDAPKHTANIARKRHLMFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERGRDRLIAGDDAVLGEVRHRVPGCRSPTIALPDPSGPARTGAKQATASSRKIFK 718
            MVDS DD+ DGEKSK+Q+KRELHALV+LGERLTTLK D  A+LPLTD LR+AL +A KHTA+ ARKRH+ F+GKLMR QD DAI  LL+Q+D+STRQYNERFH+LER RDRLI G+D  L    +  P      +              +  A++RK+FK
Sbjct:    1 MVDSNDDAFDGEKSKTQIKRELHALVELGERLTTLKADTLARLPLTDELRKALAEASKHTAHGARKRHMSFVGKLMRVQDLDAIHALLEQMDSSTRQYNERFHSLERWRDRLIDGNDEDLERFVNEYPDTDRQQLRSLVRHAQHEKARNKPPAAARKVFK 160          
BLAST of EY729727 vs. ExPASy Swiss-Prot
Match: Y941_PSEPK (UPF0307 protein PP_0941 OS=Pseudomonas putida (strain KT2440) GN=PP_0941 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.020e-43
Identity = 93/160 (58.13%), Postives = 114/160 (71.25%), Query Frame = 2
Query:  239 MVDSYDDSLDGEKSKSQVKRELHALVDLGERLTTLKPDLCAKLPLTDALRRALNDAPKHTANIARKRHLMFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERGRDRLIAGDDAVLGEVRHRVPGCRSPTIALPDPSGPARTGAKQATASSRKIFK 718
            MVDS DD+ DGEKSK+Q+KRELHALV+LGERLTTLK D  A+LPLTD LR+AL +A KHTA+ ARKRH+ F+GKLMR QD DAI  LL+Q+D+STRQYNERFH+LER RDRLI G+D  L    +  P      +              +  A++RK+FK
Sbjct:    1 MVDSNDDAFDGEKSKTQIKRELHALVELGERLTTLKADTLARLPLTDELRKALAEASKHTAHGARKRHMSFVGKLMRVQDLDAIHALLEQMDSSTRQYNERFHSLERWRDRLIDGNDEDLERFVNEYPDTDRQQLRSLVRHAQHEKARNKPPAAARKVFK 160          
BLAST of EY729727 vs. ExPASy Swiss-Prot
Match: Y1082_PSEE4 (UPF0307 protein PSEEN1082 OS=Pseudomonas entomophila (strain L48) GN=PSEEN1082 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.020e-43
Identity = 91/160 (56.88%), Postives = 115/160 (71.88%), Query Frame = 2
Query:  239 MVDSYDDSLDGEKSKSQVKRELHALVDLGERLTTLKPDLCAKLPLTDALRRALNDAPKHTANIARKRHLMFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERGRDRLIAGDDAVLGEVRHRVPGCRSPTIALPDPSGPARTGAKQATASSRKIFK 718
            MVDSYDD+ DGEKSK+Q+KRELHALV+LGERLTTLK D  A+LPLTD LR+AL++A +HTA+ ARKRH+ F+GKLMR QD DAI  +L+Q+D+S+RQYNERFH LER RDRLI G+D  L    +  P      +              +  A++RK+FK
Sbjct:    1 MVDSYDDAFDGEKSKTQIKRELHALVELGERLTTLKADTLARLPLTDELRKALDEASRHTAHGARKRHMSFVGKLMRVQDLDAIHAVLEQIDSSSRQYNERFHGLERWRDRLIDGNDEDLERFVNEFPDTDRQHLRSLIRHAQHEKARNKPPAAARKVFK 160          
BLAST of EY729727 vs. ExPASy Swiss-Prot
Match: Y4852_PSEA8 (UPF0307 protein PLES_48521 OS=Pseudomonas aeruginosa (strain LESB58) GN=PLES_48521 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.501e-43
Identity = 92/155 (59.35%), Postives = 110/155 (70.97%), Query Frame = 2
Query:  254 DDSLDGEKSKSQVKRELHALVDLGERLTTLKPDLCAKLPLTDALRRALNDAPKHTANIARKRHLMFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERGRDRLIAGDDAVLGEVRHRVPGCRSPTIALPDPSGPARTGAKQATASSRKIFK 718
            DDS   EKSKSQ+KRELHAL DLGERLTTL+P L  +LPLTD LR+AL +APKH A+IARKRH+ +IGKLMRDQD DAI+ L+DQ+D+STRQYNERFH LER RD+LIAG DA L       P C    +              +  A++RK+FK
Sbjct:    7 DDSQFEEKSKSQIKRELHALQDLGERLTTLQPQLLERLPLTDPLRKALLEAPKHKAHIARKRHIQYIGKLMRDQDVDAIVALIDQVDSSTRQYNERFHALERWRDQLIAGGDAALDAFVGEFPECDRQHLRGLVRHAQHEAAHNKPPAAARKVFK 161          
BLAST of EY729727 vs. ExPASy Swiss-Prot
Match: Y4473_PSEAE (UPF0307 protein PA4473 OS=Pseudomonas aeruginosa GN=PA4473 PE=3 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 4.501e-43
Identity = 92/155 (59.35%), Postives = 110/155 (70.97%), Query Frame = 2
Query:  254 DDSLDGEKSKSQVKRELHALVDLGERLTTLKPDLCAKLPLTDALRRALNDAPKHTANIARKRHLMFIGKLMRDQDTDAILTLLDQLDASTRQYNERFHNLERGRDRLIAGDDAVLGEVRHRVPGCRSPTIALPDPSGPARTGAKQATASSRKIFK 718
            DDS   EKSKSQ+KRELHAL DLGERLTTL+P L  +LPLTD LR+AL +APKH A+IARKRH+ +IGKLMRDQD DAI+ L+DQ+D+STRQYNERFH LER RD+LIAG DA L       P C    +              +  A++RK+FK
Sbjct:    7 DDSQFEEKSKSQIKRELHALQDLGERLTTLQPQLLERLPLTDPLRKALLEAPKHKAHIARKRHIQYIGKLMRDQDVDAIVALIDQVDSSTRQYNERFHALERWRDQLIAGGDAALDAFVGEFPECDRQHLRGLVRHAQHEAAHNKPPAAARKVFK 161          
The following BLAST results are available for this feature:
BLAST of EY729727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
Y846_PSEPF9.981e-5977.64UPF0307 protein Pfl01_0846 OS=Pseudomonas fluoresc... [more]
Y904_PSEF51.593e-5674.38UPF0307 protein PFL_0904 OS=Pseudomonas fluorescen... [more]
Y4464_PSESM3.005e-5571.25UPF0307 protein PSPTO_4464 OS=Pseudomonas syringae... [more]
Y864_PSEMY1.751e-5176.61UPF0307 protein Pmen_0864 OS=Pseudomonas mendocina... [more]
Y4274_PSEPW1.071e-4458.13UPF0307 protein PputW619_4274 OS=Pseudomonas putid... [more]
Y981_PSEP12.020e-4358.13UPF0307 protein Pput_0981 OS=Pseudomonas putida (s... [more]
Y941_PSEPK2.020e-4358.13UPF0307 protein PP_0941 OS=Pseudomonas putida (str... [more]
Y1082_PSEE42.020e-4356.88UPF0307 protein PSEEN1082 OS=Pseudomonas entomophi... [more]
Y4852_PSEA84.501e-4359.35UPF0307 protein PLES_48521 OS=Pseudomonas aerugino... [more]
Y4473_PSEAE4.501e-4359.35UPF0307 protein PA4473 OS=Pseudomonas aeruginosa G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-020-F05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729727 ID=EY729727; Name=EY729727; organism=Citrus sinensis; type=EST; length=783bp
ACCCCTGCTCCAGGGACACCGCCACTTCACAGGCACTGGCCCCCTGGCGC
TTGGCCTCGGCAATGATCTGCTCGACTTGCTCCTGCAGTGCCGGTAACGC
TTGCGGACCGACGCTTTGGGTTGCACTCATGGTTTTCTCCACTCAAATTC
TGCTTTCGGTTAAGGCCTTCTAGCGACCGGGCCGGACAAGCGGCCCCCGA
CTGGTTATCATGGCGGCGTTTCTTTGCGGACTGCCACCATGGTTGATTCT
TACGACGACTCCCTCGATGGGGAGAAAAGCAAATCTCAGGTCAAACGCGA
GCTGCATGCTCTGGTTGACCTCGGCGAGCGCCTTACAACACTCAAGCCTG
ACTTGTGTGCAAAACTGCCATTGACCGACGCCCTGCGCCGGGCTCTGAAC
GATGCGCCCAAGCACACCGCGAATATCGCGCGTAAACGGCACCTCATGTT
TATCGGCAAACTGATGCGCGACCAGGACACTGACGCCATTCTGACGTTGC
TCGATCAACTCGATGCCTCCACTCGCCAGTACAACGAGCGTTTCCATAAC
CTGGAACGCGGGCGTGATCGCTTGATCGCCGGCGATGACGCGGTACTGGG
AGAAGTTCGTCATCGAGTACCCGGATGCCGATCGCCAACAATTGCGCTCC
CTGATCCGTCAGGCCCAGCACGAACTGGCGCAAAGCAAGCCACGGCCTCC
AGCCGAAAAATCTTCAAGTAATCCGTGAGCTGGACGATAGTCAACGCGGC
CTGCGCTGACCTCTCCCCCGGGGTGGGGNNNNC
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