EY729090

Overview
NameEY729090
Unique NameEY729090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length432
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729090 vs. ExPASy Swiss-Prot
Match: YNEN_BACSU (Thioredoxin-like protein yneN OS=Bacillus subtilis GN=yneN PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.320e-11
Identity = 31/85 (36.47%), Postives = 47/85 (55.29%), Query Frame = 1
Query:  163 EKGTHLPDITLRNANGETVQLADYKGGPLVINLWATWCPPCRREMPVLESAQRQRPD----VTFLFVNQAESMQSVATYLATQGL 405
            ++G   PD +L+  +GE   L D KG  +++N WATWC PCR+EMP +E  Q++  D    V   F +  +S + V  +  T  L
Sbjct:   34 QEGQQAPDFSLKTLSGEKSSLQDAKGKKVLLNFWATWCKPCRQEMPAMEKLQKEYADKLAVVAVNFTSAEKSEKQVRAFADTYDL 118          
BLAST of EY729090 vs. ExPASy Swiss-Prot
Match: TLPA_BRAJA (Thiol:disulfide interchange protein tlpA OS=Bradyrhizobium japonicum GN=tlpA PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.320e-11
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 1
Query:  148 SLTLYEKGTHLPDITLRNANGETVQLADYKGGPLVINLWATWCPPCRREMPVLESAQ 318
            +LT+      LPD+   +A+G+  +L+D++G  L++NLWATWC PCR+EMP L+  Q
Sbjct:   65 ALTMASAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQ 121          
BLAST of EY729090 vs. ExPASy Swiss-Prot
Match: RESA_BACSU (Thiol-disulfide oxidoreductase resA OS=Bacillus subtilis GN=resA PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 6.320e-11
Identity = 34/125 (27.20%), Postives = 63/125 (50.40%), Query Frame = 1
Query:   85 LRKPLSAGVITGLAFWALTSLSLTLYE----------KGTHLPDITLRNANGETVQLADYKGGPLVINLWATWCPPCRREMPVLESAQR--QRPDVTFLFVNQAESMQSVATYLATQGLNLDNVL 423
            ++K     + TG+    + +L  T+Y           +G+  P+  L + NG+ ++L+D KG  + +N W TWC PC++E P + +  +  +   V  + VN  ES  +V  ++ + G+N   VL
Sbjct:    1 MKKKRRLFIRTGILLVLICALGYTIYNAVFAGKESISEGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVL 125          
The following BLAST results are available for this feature:
BLAST of EY729090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
YNEN_BACSU6.320e-1136.47Thioredoxin-like protein yneN OS=Bacillus subtilis... [more]
TLPA_BRAJA6.320e-1145.61Thiol:disulfide interchange protein tlpA OS=Bradyr... [more]
RESA_BACSU6.320e-1127.20Thiol-disulfide oxidoreductase resA OS=Bacillus su... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-012-D08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729090 ID=EY729090; Name=EY729090; organism=Citrus sinensis; type=EST; length=432bp
CTGCGGGACGGCGGTTTTCTCGCCTGGCCCGGCGTTATCGCGCTGATCCT
CGGCGCCCTGATCTACGGCTGGCGCCGCCCGCTGCTGCGCAAGCCCCTGA
GCGCAGGCGTGATCACCGGCCTCGCGTTCTGGGCCCTGACCAGCCTGTCC
CTGACCCTCTACGAAAAAGGCACGCACCTGCCGGACATCACCCTGCGCAA
CGCCAATGGCGAAACCGTGCAACTAGCCGACTACAAGGGCGGCCCGCTGG
TGATCAATCTGTGGGCCACCTGGTGCCCGCCGTGCCGGCGCGAAATGCCG
GTACTGGAAAGTGCCCAGCGCCAACGCCCGGACGTGACCTTCCTGTTCGT
CAACCAGGCCGAAAGCATGCAAAGCGTCGCCACCTACCTGGCGACCCAGG
GCCTGAACCTGGACAACGTGCTGTTCGACGCC
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