EY729072

Overview
NameEY729072
Unique NameEY729072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729072 vs. ExPASy Swiss-Prot
Match: FABF_RHIME (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti GN=fabF PE=3 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 2.046e-65
Identity = 124/223 (55.61%), Postives = 157/223 (70.40%), Query Frame = -3
Query:   58 QEQRKMDRFIVLXXAASQEAXAQXGWSPQTPSQQXRTATIIASGVGGFPAIAEAVRTADSKGPRRLSPFTIPSFLGNMAAGHVSIQHQXKGPLGSPVTACAAGVQAIGDAARMIRAGEIDIAVCGGAEACIHRVSLGGFAAARALSSDYNDTPALASRPFDQGRDGFVMGEGAGILVIEELEHALARGATPIAELVGYGTSADAYHMTSGPEDGSGARRAMEL 726
            +EQRK+D FIV   AA+  A A  GW P++   Q  T  +I SG+GG   I +A  T   KGPRR+SPF IP  L N+AAG VSI+H+ +GP  S VTAC+ G  AIGDA+R+I  G+ D+ V GG E+ I R+SL GFAA +ALS+ +ND P  ASRP+D  RDGFVMGEGAGI+V+EELEHA ARGA   AE++GYG S DA+H+T+  EDG GA R M++
Sbjct:   71 KEQRKVDPFIVYAMAAADMALADAGWKPESDEDQISTGVLIGSGIGGLEGIVDAGYTLRDKGPRRISPFFIPGRLINLAAGQVSIRHKLRGPNHSVVTACSTGAHAIGDASRLIALGDADVMVAGGTESPICRISLAGFAACKALSTQHNDNPEKASRPYDADRDGFVMGEGAGIVVLEELEHARARGAKIYAEVIGYGLSGDAFHITAPSEDGEGAYRCMQM 293          
BLAST of EY729072 vs. ExPASy Swiss-Prot
Match: KASM_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.389e-52
Identity = 106/213 (49.77%), Postives = 136/213 (63.85%), Query Frame = -3
Query:   64 FIVLXXAASQEAXAQXGWSPQTPSQQXRTATIIASGVGGFPAIAEAVRTADSKGPRRLSPFTIPSFLGNMAAGHVSIQHQXKGPLGSPVTACAAGVQAIGDAARMIRAGEIDIAVCGGAEACIHRVSLGGFAAARALSSDYNDTPALASRPFDQGRDGFVMGEGAGILVIEELEHALARGATPIAELVGYGTSADAYHMTSGPEDGSGARRAM 702
            FI     A+ EA     W P    ++ RT   I  G+G    I EA +    K  RRLSPF IP  L NMA+GHVS+++  +GP  + VTACA G  +IGDA RMI+ G+ D+ V GG E+ I  +S+ GF+ +RALS+ +N +P  ASRPFD  RDGFV+GEG+G++V+EE EHA  RGA   AEL GYG S DA+H+T  PEDG GA  AM
Sbjct:  118 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAM 330          
BLAST of EY729072 vs. ExPASy Swiss-Prot
Match: FABF_SHIFL (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri GN=fabF PE=3 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.288e-51
Identity = 112/221 (50.68%), Postives = 142/221 (64.25%), Query Frame = -3
Query:   64 QEQRKMDRFIVLXXAASQEAXAQXGWSPQTPSQQXRTATIIASGVGGFPAIAEAVRTADSKGPRRLSPFTIPSFLGNMAAGHVSIQHQXKGPLGSPVTACAAGVQAIGDAARMIRAGEIDIAVCGGAEACIHRVSLGGFAAARALSSDYNDTPALASRPFDQGRDGFVMGEGAGILVIEELEHALARGATPIAELVGYGTSADAYHMTSGPEDGSGARRAM 726
            +EQRKMD FI     A  +A    G    T     R    I SG+GG   I E   +  + GPR++SPF +PS + NM AGH++I +  +GP  S  TAC +GV  IG AAR+I  G+ D+ V GGAE     + +GGF AARALS+  ND P  ASRP+D+ RDGFV+G+GAG+LV+EE EHA  RGA   AELVG+G S+DAYHMTS PE+G+GA  AM
Sbjct:   66 KEQRKMDAFIQYGIVAGVQAMQDSGLEI-TEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALST-RNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAM 284          
BLAST of EY729072 vs. ExPASy Swiss-Prot
Match: FABF_ECOLI (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli (strain K12) GN=fabF PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.288e-51
Identity = 112/221 (50.68%), Postives = 142/221 (64.25%), Query Frame = -3
Query:   64 QEQRKMDRFIVLXXAASQEAXAQXGWSPQTPSQQXRTATIIASGVGGFPAIAEAVRTADSKGPRRLSPFTIPSFLGNMAAGHVSIQHQXKGPLGSPVTACAAGVQAIGDAARMIRAGEIDIAVCGGAEACIHRVSLGGFAAARALSSDYNDTPALASRPFDQGRDGFVMGEGAGILVIEELEHALARGATPIAELVGYGTSADAYHMTSGPEDGSGARRAM 726
            +EQRKMD FI     A  +A    G    T     R    I SG+GG   I E   +  + GPR++SPF +PS + NM AGH++I +  +GP  S  TAC +GV  IG AAR+I  G+ D+ V GGAE     + +GGF AARALS+  ND P  ASRP+D+ RDGFV+G+GAG+LV+EE EHA  RGA   AELVG+G S+DAYHMTS PE+G+GA  AM
Sbjct:   66 KEQRKMDAFIQYGIVAGVQAMQDSGLEI-TEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALST-RNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAM 284          
BLAST of EY729072 vs. ExPASy Swiss-Prot
Match: FABF_ECOL6 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O6 GN=fabF PE=3 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.288e-51
Identity = 112/221 (50.68%), Postives = 142/221 (64.25%), Query Frame = -3
Query:   64 QEQRKMDRFIVLXXAASQEAXAQXGWSPQTPSQQXRTATIIASGVGGFPAIAEAVRTADSKGPRRLSPFTIPSFLGNMAAGHVSIQHQXKGPLGSPVTACAAGVQAIGDAARMIRAGEIDIAVCGGAEACIHRVSLGGFAAARALSSDYNDTPALASRPFDQGRDGFVMGEGAGILVIEELEHALARGATPIAELVGYGTSADAYHMTSGPEDGSGARRAM 726
            +EQRKMD FI     A  +A    G    T     R    I SG+GG   I E   +  + GPR++SPF +PS + NM AGH++I +  +GP  S  TAC +GV  IG AAR+I  G+ D+ V GGAE     + +GGF AARALS+  ND P  ASRP+D+ RDGFV+G+GAG+LV+EE EHA  RGA   AELVG+G S+DAYHMTS PE+G+GA  AM
Sbjct:   66 KEQRKMDAFIQYGIVAGVQAMQDSGLEI-TEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALST-RNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAM 284          
BLAST of EY729072 vs. ExPASy Swiss-Prot
Match: FABF_ECO57 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O157:H7 GN=fabF PE=3 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.288e-51
Identity = 112/221 (50.68%), Postives = 142/221 (64.25%), Query Frame = -3
Query:   64 QEQRKMDRFIVLXXAASQEAXAQXGWSPQTPSQQXRTATIIASGVGGFPAIAEAVRTADSKGPRRLSPFTIPSFLGNMAAGHVSIQHQXKGPLGSPVTACAAGVQAIGDAARMIRAGEIDIAVCGGAEACIHRVSLGGFAAARALSSDYNDTPALASRPFDQGRDGFVMGEGAGILVIEELEHALARGATPIAELVGYGTSADAYHMTSGPEDGSGARRAM 726
            +EQRKMD FI     A  +A    G    T     R    I SG+GG   I E   +  + GPR++SPF +PS + NM AGH++I +  +GP  S  TAC +GV  IG AAR+I  G+ D+ V GGAE     + +GGF AARALS+  ND P  ASRP+D+ RDGFV+G+GAG+LV+EE EHA  RGA   AELVG+G S+DAYHMTS PE+G+GA  AM
Sbjct:   66 KEQRKMDAFIQYGIVAGVQAMQDSGLEI-TEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALST-RNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAM 284          
BLAST of EY729072 vs. ExPASy Swiss-Prot
Match: FABF_BACSU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis GN=fabF PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.685e-49
Identity = 105/222 (47.30%), Postives = 139/222 (62.61%), Query Frame = -3
Query:   61 QEQRKMDRFIVLXXAASQEAXAQXGWSPQTPSQQXRTATIIASGVGGFPAIAEAVRTADSKGPRRLSPFTIPSFLGNMAAGHVSIQHQXKGPLGSPVTACAAGVQAIGDAARMIRAGEIDIAVCGGAEACIHRVSLGGFAAARALSSDYNDTPALASRPFDQGRDGFVMGEGAGILVIEELEHALARGATPIAELVGYGTSADAYHMTSGPEDGSGARRAME 726
            +E RKMDRF      A++ A      +  T     R    + SG+GG   +        +KGPRR+SPF +P  + +MA G +SI    KG     VTACA G  +IGDA ++I+ G+ D+ V GG EA + R+S  GF+A +ALS+  N  P  ASRPFD+ RDGFVMGEGAGI+V+EELEHALARGA    E+VGYG++ DAYH+T+  +DG G  RAM+
Sbjct:   66 KEARKMDRFTQYAVVAAKMAVEDADLNI-TDEIAPRVGVWVGSGIGGLETLESQFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKVIQRGDADVMVTGGTEAPLTRMSFAGFSANKALST--NPDPKTASRPFDKNRDGFVMGEGAGIIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQ 284          
BLAST of EY729072 vs. ExPASy Swiss-Prot
Match: FABF_VIBHA (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 5.981e-49
Identity = 109/222 (49.10%), Postives = 136/222 (61.26%), Query Frame = -3
Query:   61 QEQRKMDRFIVLXXAASQEAXAQXGWSPQTPSQQXRTATIIASGVGGFPAIAEAVRTADSKGPRRLSPFTIPSFLGNMAAGHVSIQHQXKGPLGSPVTACAAGVQAIGDAARMIRAGEIDIAVCGGAEACIHRVSLGGFAAARALSSDYNDTPALASRPFDQGRDGFVMGEGAGILVIEELEHALARGATPIAELVGYGTSADAYHMTSGPEDGSGARRAME 726
            ++ RKMD FI    AA  +A    G    T     R    I SG+GG   I         KGPR++SPF +PS + NM AG++SI    +GP  +  TAC  G+  IG AARMI  G+ +  V GGAE     + + GF AA+ALS+  ND P  ASRP+D+GRDGFV+G+GAG++V+EE EHA ARGA   AELVG+G S DAYHMTS  EDGSG   AME
Sbjct:   66 KDARKMDLFIQYGIAAGIQALDDSGLEI-TEENAARVGVAIGSGIGGLDLIEAGHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKGRDGFVLGDGAGVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAME 285          
BLAST of EY729072 vs. ExPASy Swiss-Prot
Match: FABF_STAAW (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.812e-49
Identity = 108/224 (48.21%), Postives = 141/224 (62.95%), Query Frame = -3
Query:   61 QEQRKMDRFIVLXXAASQEAX--AQXGWSPQTPSQQXRTATIIASGVGGFPAIAEAVRTADSKGPRRLSPFTIPSFLGNMAAGHVSIQHQXKGPLGSPVTACAAGVQAIGDAARMIRAGEIDIAVCGGAEACIHRVSLGGFAAARALSSDYNDTPALASRPFDQGRDGFVMGEGAGILVIEELEHALARGATPIAELVGYGTSADAYHMTSGPEDGSGARRAME 726
            +E R+MDRF      A++EA   AQ   +  T     R    I SG+GG      A +    KGPRR+SPF +P  + +MA G VSI    KGP G+ VTACA G  +IG+A ++++ G+ D  + GG EA I  +++ GF+A+RALS+  ND    A RPF +GRDGFVMGEGAGILVIE LE A ARGA   AE+VGYGT+ DAYH+T+   +G G  RAM+
Sbjct:   67 KEARRMDRFTQYAIVAAREAVKDAQLDINENTAD---RIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST--NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQ 285          
BLAST of EY729072 vs. ExPASy Swiss-Prot
Match: FABF_STAAU (3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment) OS=Staphylococcus aureus GN=fabF PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.812e-49
Identity = 108/224 (48.21%), Postives = 141/224 (62.95%), Query Frame = -3
Query:   61 QEQRKMDRFIVLXXAASQEAX--AQXGWSPQTPSQQXRTATIIASGVGGFPAIAEAVRTADSKGPRRLSPFTIPSFLGNMAAGHVSIQHQXKGPLGSPVTACAAGVQAIGDAARMIRAGEIDIAVCGGAEACIHRVSLGGFAAARALSSDYNDTPALASRPFDQGRDGFVMGEGAGILVIEELEHALARGATPIAELVGYGTSADAYHMTSGPEDGSGARRAME 726
            +E R+MDRF      A++EA   AQ   +  T     R    I SG+GG      A +    KGPRR+SPF +P  + +MA G VSI    KGP G+ VTACA G  +IG+A ++++ G+ D  + GG EA I  +++ GF+A+RALS+  ND    A RPF +GRDGFVMGEGAGILVIE LE A ARGA   AE+VGYGT+ DAYH+T+   +G G  RAM+
Sbjct:   60 KEARRMDRFTQYAIVAAREAVKDAQLDINENTAD---RIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST--NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQ 278          
The following BLAST results are available for this feature:
BLAST of EY729072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
FABF_RHIME2.046e-6555.613-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhi... [more]
KASM_ARATH3.389e-5249.773-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
FABF_SHIFL1.288e-5150.683-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shi... [more]
FABF_ECOLI1.288e-5150.683-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]
FABF_ECOL61.288e-5150.683-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]
FABF_ECO571.288e-5150.683-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]
FABF_BACSU2.685e-4947.303-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bac... [more]
FABF_VIBHA5.981e-4949.103-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vib... [more]
FABF_STAAW7.812e-4948.213-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAU7.812e-4948.213-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragm... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-012-B12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729072 ID=EY729072; Name=EY729072; organism=Citrus sinensis; type=EST; length=821bp
TGGCATGGGCGTCAAATGCTGGATCTGTGCGGCGCTGATCCCCGCCTGCG
CAATCGCCAATTCCATCGCCCGGCGCGCACCGGAGCCATCTTCCGGCCCT
GAAGTCATGTGATAGGCGTCGGCGCTGGTACCGTAGCCCACCAGCTCGGC
GATAGGCGTGGCCCCGCGAGCCAGTGCATGCTCCAGCTCCTCGATCACCA
ATATCCCGGCACCTTCGCCCATCACAAATCCATCTCGGCCTTGATCAAAT
GGGCGGGAAGCCAATGCCGGCGTGTCGTTGTAATCGCTGGACAGTGCACG
TGCTGCGGCAAAACCGCCGAGGCTGACCCGGTGGATGCAGGCTTCGGCGC
CGCCACACACGGCGATATCGATTTCCCCTGCGCGGATCATCCGAGCGGCA
TCACCAATCGCCTGTACGCCGGCGGCGCAAGCGGTGACGGGGGAGCCGAG
CGGGCCTTTCANTTGGTGCTGGATCGACACATGCCCGGCTGCCATGTTGC
CGAGGAATGACGGGATCGTGAACGGCGACAGGCGGCGTGGCCCTTTGCTG
TCAGCCGTACGAACGGCCTCGGCAATCGCGGGAAAACCACCCACGCCGGA
GGCGATGATNGTCGCGGTACGTNCTTGCTGCGATGGCGTCTGCGGACTCC
ANCCANCCTGGGCCANGGCCTCTTGCGAGGCTGCCANGGNCAACACGATG
AACCGGTCCATCTTGCGTTGTTCCTGGCCGGGATGACAGTGTCGGGGTCA
AANCCGGGCTCAGGGTCTGGGTGCGGTCGACCACCTGGCCGCGATGCTAT
TGCCAGTCGCCAACATGCCTC
back to top