EY729065

Overview
NameEY729065
Unique NameEY729065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729065 vs. ExPASy Swiss-Prot
Match: PIGM_RHOER (Pigment production hydroxylase OS=Rhodococcus erythropolis PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.366e-24
Identity = 64/218 (29.36%), Postives = 108/218 (49.54%), Query Frame = -3
Query:   24 LAGACASTAWAMSLLCTHSHQLALFSAKLQQEVWGDNPNATASSSIAPFGRTEDVEGGVLFSGEMGWSSGCDHAEWAIVGFRRKNTEGTQD----YCFAVLPRSDYQ-IRDDWFAAGMKGSGTKTLIIDNVLVPEHRIQKAKDMMEGKSA-GFGLYPDSKIFYSPYRPYFASGFSTVSLGVAERMLEVFREKTKTRVRA---------YTGAAVGAAT 632
            +A    S  W   ++  H  QLA    K+QQE+WG +P+   +S   P G     +GG  FSG   +SSG DH +WA +G    + +G  +        ++PR+DY+ I D W   G++G+G+K L++ +  VP++R+    ++++G +   +G      ++  P+   F  G +  ++G+ E ML    E    R+ A         YT  A+G AT
Sbjct:   68 MASLNPSAGWVHGIVGVHPWQLAFADPKVQQEIWGSDPDTWMASPYMPGGMCIPTDGGYKFSGRWQFSSGTDHCDWAFLGAMACDKDGNMEMPPRMLHVIIPRTDYEIIEDSWDVMGLRGTGSKDLVVKDAYVPDYRVMDCDEVIDGTAVRKYG--RTETLYLMPWSNMFPLGITAATIGICEGMLFHANEYQAGRINAQGTAVKDDPYTLFAIGQAT 283          
BLAST of EY729065 vs. ExPASy Swiss-Prot
Match: PIGM_RHOST (Pigment production hydroxylase OS=Rhodococcus sp. (strain ATCC 21145) PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.533e-23
Identity = 60/212 (28.30%), Postives = 105/212 (49.53%), Query Frame = -3
Query:    6 RLLAGACASTAWAMSLLCTHSHQLALFSAKLQQEVWGDNPNATASSSIAPFGRTEDVEGGVLFSGEMGWSSGCDHAEW-AIVGFRRKNTEGTQDYCFAVLPRSDYQIRDDWFAAGMKGSGTKTLIIDNVLVPEHRIQKAKDMMEGKSAGFGLYPDSKIFYSPYRPYFASGFSTVSLGVAERMLEVFREKTKTRVRAYTGAAVGAATPALMRL 638
            R ++  C ST W  S     + ++ +F+ + Q+EV+ D P    + + AP G+ + V+GG   +G+  W+SG  HAEW    G   +         F V PR D ++ D W+ AGM G+G+  + +D+V VPE+R       + G + G  ++P + +++ P+ P+  +  + V +G      + F ++TK R    +         A MRL
Sbjct:   69 RTISAVCPSTGWVTSFYIGAAWRVNIFTEQAQREVFADKPYTLTAGTAAPLGQVQKVDGGYRITGQTAWNSGSVHAEWFTFAGVVFEEGSAPTPLWFLV-PREDVKVLDTWYIAGMSGTGSNDISVDDVFVPEYRTGPFALALAGTAPGQLIHP-NPMYHLPFLPFAMAEVTPVVVGALRGAADAFVQRTKDRQGTISQEKASGKQAAQMRL 278          
The following BLAST results are available for this feature:
BLAST of EY729065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PIGM_RHOER2.366e-2429.36Pigment production hydroxylase OS=Rhodococcus eryt... [more]
PIGM_RHOST1.533e-2328.30Pigment production hydroxylase OS=Rhodococcus sp. ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-012-B04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729065 ID=EY729065; Name=EY729065; organism=Citrus sinensis; type=EST; length=844bp
TCCGCCAGGCGCATCAACGCCGGGGTCGCGGCCCCCACCGCCGCGCCGGT
GTAGGCACGTACGCGGGTCTTGGTTTTCTCGCGGAACACCTCAAGCATGC
GCTCGGCCACCCCCAGGCTGACGGTGGAAAAACCGCTGGCGAAATACGGA
CGGTACGGCGAGTAGAAAATCTTGCTGTCGGGGTACAAACCGAAACCAGC
GGACTTACCTTCCATCATGTCCTTGGCTTTCTGGATGCGGTGTTCGGGCA
CCAATACGTTGTCGATGATCAGGGTCTTGGTGCCGCTGCCTTTCATGCCG
GCGGCGAACCAGTCATCGCGAATCTGATAGTCACTGCGTGGCAACACCGC
GAAGCAGTAATCCTGAGTCCCTTCGGTATTTTTACGACGGAACCCGACAA
TCGCCCACTCGGCGTGATCGCAACCGCTGCTCCAGCCCATTTCACCGCTG
AACAGCACACCCCCTTCAACGTCTTCAGTGCGGCCAAACGGCGCGATGCT
GCTACTGGCCGTGGCGTTCGGGTTATCGCCCCAGACTTCCTGCTGCAACT
TCGCGGAAAACAGCGCCAGTTGATGGCTGTGGGTGCACAAGAGGCTCATG
GCCCANGCGGTGCTGGCACAGGCGCCGGCGAGCAGGCGATGCAGTCGGCA
ATTGCGGGCAGGGAGATTCCATGCCGCCAAGGGTTTGGGTTGAAAGCACG
GTGCATGCCGATGCTCCTGAACACGCATGGTCTCGTCGGGAACTTGCGGG
CCCTCTCCGCCTGAAAGGATTGGTAGCAATGTCGGCCAAAAAACCCCTGT
GTTCCTCTACGGAGCGGGTTGGTTTTTCCCGGGGAGGGCCCGTA
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