EY729058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN3_ARATH (5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 PE=2 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 2.569e-99 Identity = 183/267 (68.54%), Postives = 205/267 (76.78%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHLFKLL----DLMRIXXXXXXXXXXXXC*KKSA*KGHSRRGDDVEPLXXPDSLXPGSXIHGSRLASGPFSSPY 850 +NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML LATHEVHFSILREVV+TPGQQ++CFLCGQ GH A+NCEGK K++AGE DEKGD KKPYQFLHIW LREYL+ E RIPNPPFEIDLE IVDDFIF+CFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFR+ GYLTDG KP+L+RVE + + D + + A K ++R DD P PD L P + GSRLAS P SP+ Sbjct: 198 ANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVKKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVKRDKAGKA-TKRMDDEAPTVQPD-LVPVARFSGSRLASAPTPSPF 462
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN4_ARATH (5'-3' exoribonuclease 4 OS=Arabidopsis thaliana GN=XRN4 PE=2 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 9.180e-81 Identity = 141/198 (71.21%), Postives = 162/198 (81.82%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHLFK 655 SNVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML+LATHEVHFSILREV+ PGQQ+KCF+CGQ GH A++C GK+ D + + KK YQFL+IW LREYL YE IP+PPF I+ E I+DDF+F+CFFVGNDFLPHMPTLEIREGAINLLM VY+KEF A+GGYLTD + L RVEH + Sbjct: 199 SNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAAD-----IPIHKKKYQFLNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRKEFTAMGGYLTDSGEVLLDRVEHFIQ 391
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_ARATH (5'-3' exoribonuclease 2 OS=Arabidopsis thaliana GN=XRN2 PE=2 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 1.942e-77 Identity = 134/202 (66.34%), Postives = 164/202 (81.19%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHLFKLLDL 667 +NVPGEGEHKIMSY+R +N PGY+PNT HCLYGLDADLIML+LATHE+HFSILREVVF PG++ KCFLCGQ GH AA+CEGK KRK GE + + VV KKPY+F++IW LREYL+++ +IP + +L+ ++DDFIF+CFFVGNDFLPHMPTLEIREGAI LLM+VYK +FR+ YLTD SK +LR VE K + + Sbjct: 200 ANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGM 399 HSP 2 Score: 26.1794 bits (56), Expect = 1.942e-77 Identity = 17/52 (32.69%), Postives = 24/52 (46.15%), Query Frame = 1 Query: 646 FIQAVGSYEDRIF------------RXEHDSIRDMLKEISVKRAQQKRR*CG 765 FI+AVG YE++IF R D RD ++ + AQ R+ G Sbjct: 393 FIKAVGMYENQIFQKRAQVQQRQSERFRRDKARDKARDNARDNAQASRQFSG 444
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_CHAGB (5'-3' exoribonuclease 2 OS=Chaetomium globosum GN=RAT1 PE=3 SV=3) HSP 1 Score: 236.113 bits (601), Expect = 2.126e-61 Identity = 116/197 (58.88%), Postives = 138/197 (70.05%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHL 649 + VPGEGEHKIM +VR QRN P +DPNTRH +YGLDADLIML LATHE HF +LRE V F G+ C LCGQ GH NC G+AK KAGEFDEK + P KP+ +LH+ LREYL E IPN PF DLE +DD++FMCFFVGNDFLPH+P LEIRE I LMA++K +GGY+T L R +++ Sbjct: 205 ATVPGEGEHKIMEFVRSQRNSPEHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQQGKARMCKLCGQKGHDERNCRGEAKEKAGEFDEK--DKAEPLKPFIWLHVSILREYLAIELNIPNLPFRWDLERAIDDWVFMCFFVGNDFLPHLPALEIRENGIETLMAIWKDNLPVMGGYVTKDGHVDLDRAQYI 399
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_NEUCR (5'-3' exoribonuclease 2 OS=Neurospora crassa GN=rat-1 PE=3 SV=3) HSP 1 Score: 235.728 bits (600), Expect = 2.777e-61 Identity = 113/197 (57.36%), Postives = 141/197 (71.57%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVEHL 649 + VPGEGEHKIM +VR QR P +DPNTRH +YGLDADLIML LATHE HF +LRE VF + + C +CGQ GH A NC+G+AK K GEFDEK + VVP KP+ +LH+ LREYL E +P PF+ +LE +DD++FMCFFVGNDFLPH+P LEIRE I+ L A++K +GGYLT L RV+++ Sbjct: 204 ATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFDEK--DAVVPLKPFIWLHVSILREYLAIELDVPGLPFQFNLERAIDDWVFMCFFVGNDFLPHLPALEIRENGIDTLTAIWKDNLPVMGGYLTKDGHADLERVQYI 398
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_USTMA (5'-3' exoribonuclease 2 OS=Ustilago maydis GN=RAT1 PE=3 SV=3) HSP 1 Score: 230.72 bits (587), Expect = 8.933e-60 Identity = 111/195 (56.92%), Postives = 145/195 (74.36%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 643 ++VPGEGEHKIM ++R QR+ P +DPNT+H +YGLDADLIML+LATHE +F +LRE VF + K C LCGQPGH AA+C G AK+K+G+ DE KKP+ FL + TLREYL+ E IP PF DLE +DD++F+ FFVGNDFLPH+P+LEIR+GAI+ L+ ++KKE A+GGYLT+ + L R + Sbjct: 205 ASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLDADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKSGQHDEIAP-TPPEKKPFIFLDVATLREYLEVELNIPQLPFAFDLERAIDDWVFLIFFVGNDFLPHLPSLEIRDGAIDTLLRIWKKELPAMGGYLTNHGRVELGRAQ 398
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_EMENI (5'-3' exoribonuclease 2 OS=Emericella nidulans GN=rat1 PE=3 SV=3) HSP 1 Score: 228.024 bits (580), Expect = 5.790e-59 Identity = 108/195 (55.38%), Postives = 138/195 (70.77%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 643 + VPGEGEHKIM ++R QR P +DPN RH +YGLDADLIML LATHE HF +LRE V F +Q C LCGQPGH A C G+AK K GEFDEKG + KP+ +LH+ LREYL E +P+ PF DLE +DD++FMCFFVGNDFLPH+P+L+IRE I+ L+A+++ +GGYLT + L++ + Sbjct: 202 ATVPGEGEHKIMEFIRSQRASPEHDPNARHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKQRTCHLCGQPGHKAEECRGQAKEKNGEFDEKGKGATL--KPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDIREDGIDTLIAIWRDNIPLMGGYLTQDGRVDLKKAQ 394
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_ASPFU (5'-3' exoribonuclease 2 OS=Aspergillus fumigatus GN=rat1 PE=3 SV=4) HSP 1 Score: 221.861 bits (564), Expect = 4.150e-57 Identity = 107/195 (54.87%), Postives = 136/195 (69.74%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 643 + VPGEGEHKIM ++R QR P +DPNTRH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K GEFDEK + KP+ +LH+ LREYL E +P+ PF DLE +DD++FMCFFVGNDFLPH+P+L+IRE I+ L+A+++ +GGYLT+ L+R + Sbjct: 203 ATVPGEGEHKIMEFIRSQRAAPEHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEKNGEFDEKQKGSSL--KPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQ 395
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_GIBZE (5'-3' exoribonuclease 2 OS=Gibberella zeae GN=RAT1 PE=3 SV=3) HSP 1 Score: 219.935 bits (559), Expect = 1.577e-56 Identity = 110/195 (56.41%), Postives = 134/195 (68.72%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 643 + VPGEGEHKIM++VR QR P +DPNTRH +YGLDADLIML LATHE HF +LRE VF Q+ + C +CGQ GH A NC G+ K+K GE DEK V + KP+ +LH+ LREYL E +PN PF DLE VDD+IFMC FVGNDFLPH+P LEIRE I+ L ++K +GGY+T L R + Sbjct: 204 ATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKKDGEHDEKDKGVAL--KPFIWLHVAVLREYLAVELGVPNLPFRFDLERAVDDWIFMCCFVGNDFLPHLPALEIREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQ 396
BLAST of EY729058 vs. ExPASy Swiss-Prot
Match: XRN2_ASPOR (5'-3' exoribonuclease 2 OS=Aspergillus oryzae GN=rat1 PE=3 SV=3) HSP 1 Score: 218.779 bits (556), Expect = 3.513e-56 Identity = 105/195 (53.85%), Postives = 135/195 (69.23%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRALGGYLTDGSKPSLRRVE 643 + VPGEGEHKIM +VR QR P +DPNTRH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K G+FDEKG + KP+ +L++ LREYL E +P+ PF DLE +DD++FMCFFVGNDFLPH+P+L+IRE I+ L+A+++ +GGYLT ++ + Sbjct: 201 ATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNGQFDEKGKGTSL--KPFIWLNVSILREYLAVELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVEFKKAQ 393 The following BLAST results are available for this feature:
BLAST of EY729058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729058 ID=EY729058; Name=EY729058; organism=Citrus sinensis; type=EST; length=921bpback to top |