EY729049

Overview
NameEY729049
Unique NameEY729049
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY729049 vs. ExPASy Swiss-Prot
Match: UGPI6_ARATH (Uncharacterized GPI-anchored protein At1g61900 OS=Arabidopsis thaliana GN=At1g61900 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.193e-17
Identity = 49/137 (35.77%), Postives = 72/137 (52.55%), Query Frame = 1 
Query:  478 FLQHTNXNLTGRCPVNFSAMSSIMQKTASDCSQPLAPLVGNVICCPQLGSLLHIFQGFYSMKSDKLVLQNTVANDCFSDILSILASRGAKHTFYTLLG-NIIDLTGGSCPVKDVVXFEKIVTRTNYLMPAALLIPLK 885
            ++  T   L+G C +NFSA  S++Q T+ +C    APL+ NV+CCPQL + L I  G  S ++  L L  T +  C SD+  IL  +GA      +   +  +LT  SCPV +V  FE  V     L+    + P+K
Sbjct:   57 YINSTMPKLSGLCSLNFSASESLIQTTSHNCWTVFAPLLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQILVGKGASGQLNKICSIHSSNLTSSSCPVINVDEFESTVDTAKLLLACEKIDPVK 193
The following BLAST results are available for this feature:
BLAST of EY729049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UGPI6_ARATH9.193e-1735.77Uncharacterized GPI-anchored protein At1g61900 OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-H08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729049 ID=EY729049; Name=EY729049; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGCCCACGCGTCCGTCCGATCGACCCCTAAAAGGAGGCGGT
TATGTGCATCTGAGCTTCAGAGCTTGAAATTTCACTCTATCTTTGTGAAA
CGTGGAAGGTTATATGGGTGCAATATCATCTTTGGGTGTTGCTGTGAACG
AATATTGCACAGATAATCAACTACGGTAGGATTATCTTTTGTAAACTAAA
TGGTGCCAGAGGGCTAGTGGGGCTATGGACTGTTTTCAGACTGTTAGTCA
GCTAAAGGGTTCCACGTGCCATGCATTTTTGTTATTCATCGCCTGGTTGT
TTAGTTTCCAAGATGTAGTGGCACTACATAATGTGCTTGAGCCTAGTCAT
GTTTCTTCCACTTCTGAGCTTGCCAATCCACCTAGTACTGGGCTTTTTGA
ACCTATAGAAATATCCCCAGCTGTAATTCCACCTTACCCGTATGCTGGCG
AACCATTGCCTCCAATGTATCCAACTTTTCCTACAACATACGAACCNAAA
TTTAACTGGGAGATGCCCGGTAAATTTCTCTGCCATGTCAAGCATCATGC
AAAAAACAGCATCGGATTGTTCCCAACCTTTGGCCCCACTTGTAGGAAAC
GTAATATGTTGTCCGCAGCTTGGTAGTTTACTCCACATATTCCAAGGTTT
CTACAGTATGAAATCTGATAAGTTGGTATTGCAAAACACAGTTGCTAATG
ATTGTTTTTCAGATATCCTTAGCATATTAGCTAGCAGAGGGGCCAAACAT
ACATTCTACACTTTGCTCGGTAACATCATTGATCTCACGGGTGGGTCTTG
TCCAGTGAAGGATGTTGTTANCTTTGAAAAAATAGTAACACGAACCAATT
ACTTGATGCCTGCAGCACTGTTGATCCCCCTTAAGAGTGTTGCGACCANT
TGCCA
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