EY729048

Overview
NameEY729048
Unique NameEY729048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length154
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729048 vs. ExPASy Swiss-Prot
Match: AROA_RHILW (3-phosphoshikimate 1-carboxyvinyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=aroA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.787e-13
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 1
Query:    1 LTLDCMRAFGAQVDIVDESTWRVAPTGYTAHDYLIEPDASAATYLWAAEVL 153
            LT   M+AFGA+V+     TWRV PTGY A D+++EPDASAATYLWAAEVL
Sbjct:  205 LTTAAMKAFGAKVEKTSPVTWRVEPTGYRAADFIVEPDASAATYLWAAEVL 255          
BLAST of EY729048 vs. ExPASy Swiss-Prot
Match: AROA_RHIEC (3-phosphoshikimate 1-carboxyvinyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=aroA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.787e-13
Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = 1
Query:    1 LTLDCMRAFGAQVDIVDESTWRVAPTGYTAHDYLIEPDASAATYLWAAEVL 153
            LT   M+AFGA+V+     TWRV PTGY A D++IEPDASAATYLWAAEVL
Sbjct:  205 LTTAAMKAFGAKVEKTSPVTWRVEPTGYRAADFVIEPDASAATYLWAAEVL 255          
BLAST of EY729048 vs. ExPASy Swiss-Prot
Match: AROA_RHIE6 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Rhizobium etli (strain CIAT 652) GN=aroA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.787e-13
Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = 1
Query:    1 LTLDCMRAFGAQVDIVDESTWRVAPTGYTAHDYLIEPDASAATYLWAAEVL 153
            LT   M+AFGA+V+     TWRV PTGY A D++IEPDASAATYLWAAEVL
Sbjct:  205 LTTAAMKAFGARVEKTSPVTWRVEPTGYRAADFVIEPDASAATYLWAAEVL 255          
BLAST of EY729048 vs. ExPASy Swiss-Prot
Match: AROA_PSEU2 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=aroA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.359e-12
Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 1
Query:    1 LTLDCMRAFGAQVDIVDESTWRVAPTGYTAHDYLIEPDASAATYLWAAEVL 153
            LTL  MRAFGA+V  + ++ W+V+ TGY A D+ IEPDASAATYLWAA+ L
Sbjct:  205 LTLAAMRAFGAEVQAIGDAAWKVSATGYRATDFHIEPDASAATYLWAAQAL 255          
BLAST of EY729048 vs. ExPASy Swiss-Prot
Match: AROA_PSE14 (3-phosphoshikimate 1-carboxyvinyltransferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=aroA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.081e-12
Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 1
Query:    1 LTLDCMRAFGAQVDIVDESTWRVAPTGYTAHDYLIEPDASAATYLWAAEVL 153
            LTL  M+AFGA+V  + E+ W+V+ TGY A D+ IEPDASAATYLWAA+ L
Sbjct:  205 LTLAAMQAFGAEVQAIGETAWKVSATGYRATDFHIEPDASAATYLWAAQAL 255          
BLAST of EY729048 vs. ExPASy Swiss-Prot
Match: AROA_PSESM (3-phosphoshikimate 1-carboxyvinyltransferase OS=Pseudomonas syringae pv. tomato GN=aroA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.965e-12
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 1
Query:    1 LTLDCMRAFGAQVDIVDESTWRVAPTGYTAHDYLIEPDASAATYLWAAEVL 153
            LTL  M+AFGA+V  + ++ W+V+ TGY A D+ IEPDASAATYLWAA+ L
Sbjct:  205 LTLAAMQAFGAEVQAIGDAAWKVSATGYHATDFHIEPDASAATYLWAAQAL 255          
The following BLAST results are available for this feature:
BLAST of EY729048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
AROA_RHILW2.787e-1366.673-phosphoshikimate 1-carboxyvinyltransferase OS=Rh... [more]
AROA_RHIEC2.787e-1368.633-phosphoshikimate 1-carboxyvinyltransferase OS=Rh... [more]
AROA_RHIE62.787e-1368.633-phosphoshikimate 1-carboxyvinyltransferase OS=Rh... [more]
AROA_PSEU22.359e-1262.753-phosphoshikimate 1-carboxyvinyltransferase OS=Ps... [more]
AROA_PSE143.081e-1262.753-phosphoshikimate 1-carboxyvinyltransferase OS=Ps... [more]
AROA_PSESM8.965e-1260.783-phosphoshikimate 1-carboxyvinyltransferase OS=Ps... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-H07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729048 ID=EY729048; Name=EY729048; organism=Citrus sinensis; type=EST; length=154bp
CTGACTCTGGACTGCATGCGCGCCTTCGGTGCCCAGGTGGACATCGTTGA
TGAAAGCACCTGGCGCGTGGCCCCGACCGGCTACACCGCCCACGATTACC
TGATCGAACCTGACGCTTCCGCCGCCACCTACTTGTGGGCTGCCGAAGTG
TTGA
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