EY754676

Overview
NameEY754676
Unique NameEY754676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY754676 vs. ExPASy Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.605e-47
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 3
Query:  123 MARSLFKAKLLLVFVADGISLSISRRGYAAAAPLGTISRTGLMEKNDLRPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 413
            MARSLFKAKLLL  VADGISLSISRRGYAAAAPLGTISRTG+MEKNDLRPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH
Sbjct:    1 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 97          
BLAST of EY754676 vs. ExPASy Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.269e-22
Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 3
Query:  123 MARSLFKAKLLLVFVADGISLSISRRGYAAAAPLG---TISRTGLMEKNDLRPAVREDSGA-----SSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRA 410
            MARS+   KLL   + DG+ +SISRRGY+ A P     +  R G M K + R A++E S +     SSAWAPDP+TGYYRPEN   EID AELREMLLNH+VR+
Sbjct:    1 MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLLNHRVRS 104          
BLAST of EY754676 vs. ExPASy Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 54/104 (51.92%), Postives = 68/104 (65.38%), Query Frame = 3
Query:  123 MARSLFKAKLLLVFVADGISLSISRRGYAAAAPLG---TISRTGLMEKNDLRPAVREDSGA-----SSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRA 410
            MARS+   K L   V D + +SISRRGY+ A P     +  R G M K + R A++E S +     SSAWAPDP+TGYYRPEN   EID A+LREM+LNH+VR+
Sbjct:    1 MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMMLNHRVRS 104          
BLAST of EY754676 vs. ExPASy Swiss-Prot
Match: ARG2_PHAAU (Indole-3-acetic acid-induced protein ARG2 OS=Phaseolus aureus GN=ARG2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.493e-11
Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 3
Query:  123 MARSLFKAKLLLVFVADGISLSISRRGYAAAAPLG-TISRTGLMEKNDLRPAVREDS---GASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHK 401
            MARS    K+L   VADG S + +R G+AAAA    + +R G     ++ P   E+    G   +W PDP+TGYYRPEN   EID A++R  +L  K
Sbjct:    1 MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVLGKK 96          
The following BLAST results are available for this feature:
BLAST of EY754676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
LEA5_CITSI9.605e-4796.91Late embryogenesis abundant protein Lea5 OS=Citrus... [more]
LEA5D_GOSHI6.269e-2254.81Late embryogenesis abundant protein Lea5-D OS=Goss... [more]
LEA5A_GOSHI4.493e-2051.92Late embryogenesis abundant protein Lea5-A OS=Goss... [more]
ARG2_PHAAU8.493e-1142.27Indole-3-acetic acid-induced protein ARG2 OS=Phase... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-018-G05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754676 ID=EY754676; Name=EY754676; organism=Citrus sinensis; type=EST; length=616bp
CCGCTAGTGTTTGCCTATAGCTACTGCAGGAGCAGAATCTTTCTTCTTCT
GTAGTAGCACTGTACAGAAACATCCCAGCTAGCTATCTTCATATCTATTA
AGTTCTATAAGTAAATAAAACAATGGCCCGCTCTCTCTTCAAAGCTAAGC
TTCTTCTTGTTTTTGTTGCTGATGGCATCTCGCTCTCCATTAGCAGGAGA
GGATATGCTGCAGCAGCACCCTTGGGGACCATATCTCGGACTGGTCTCAT
GGAGAAAAATGATTTGAGGCCTGCGGTGAGAGAGGATTCTGGGGCCTCTT
CTGCCTGGGCCCCAGATCCCATCACTGGGTACTACAGGCCGGAGAATCGG
GCGGTCGAGATTGATCCAGCAGAGCTTCGAGAGATGCTGTTGAACCACAA
AGTCAGGGCACACTAGGGAGTGGTGGCGCATAGCAGCAGATCCTTTGCTG
TTAGCGGTGCTTTAACTTTTTAAGTGATGTTGTTACAGTAGCAATTTTGA
CTCACTCTTAAGTCTTTGCTGTTGTATTGATATCAACTGTTATTGACAAC
TTTTAATAGTGCATTTCCATGATTTTGTCTNNNNNANNANNNNNNAAAAA
AAAAAAAAAAAAAAAA
back to top