EY729039

Overview
NameEY729039
Unique NameEY729039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729039 vs. ExPASy Swiss-Prot
Match: Y1011_HAEIN (Uncharacterized protein HI1011 OS=Haemophilus influenzae GN=HI1011 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.823e-51
Identity = 99/193 (51.30%), Postives = 130/193 (67.36%), Query Frame = -3
Query:    2 LGCIADDFTGATDLANNLVRAGMRTVQAIGVPDGALETPADAVVVALKTRTXXXXXXXXXXXXXLEWLRAQGAEQIYFKYCSTFDSTTQGNIGPVADALMTALGTDFTIATPAFPDNKRTVFKGYLFAGDVPLNESGMQHHPLTPMTDANLVRVLSAQTRRKVGLIDYAVVARGAEAIRGRIDALRREGVEIA 580
            LG IADDFTGA+D+A+ LV  G+ TVQ  GVP  +L +  DA+V++LK+R+              +WL+  G  Q YFKYCSTFDST +GNIGPV DAL+  L  DFT+ TPA P N RT+F GYLF GDV L+ESGM++HP+TPM DANL+R++ AQ + K GL+ YA V +GA  ++     L+ +G   A
Sbjct:    2 LGVIADDFTGASDIASFLVENGLSTVQMNGVPTQSLNSKVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCTQFYFKYCSTFDSTAKGNIGPVTDALLDELNEDFTVITPALPVNGRTIFNGYLFVGDVLLSESGMKNHPITPMVDANLMRLMDAQAKGKTGLVAYADVIKGASRVQECFAELKAQGYRYA 194          
BLAST of EY729039 vs. ExPASy Swiss-Prot
Match: YGBK_ECOLI (Uncharacterized protein ygbK OS=Escherichia coli (strain K12) GN=ygbK PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.706e-49
Identity = 100/195 (51.28%), Postives = 132/195 (67.69%), Query Frame = -3
Query:    2 IKLGCIADDFTGATDLANNLVRAGMRTVQAIGVPDGALETPADAVVVALKTRTXXXXXXXXXXXXXLEWLRAQGAEQIYFKYCSTFDSTTQGNIGPVADALMTALGTDFTIATPAFPDNKRTVFKGYLFAGDVPLNESGMQHHPLTPMTDANLVRVLSAQTRRKVGLIDYAVVARGAEAIRGRIDALRREGVEIA 586
            IK+G IADDFTGATD+A+ LV  G+ TVQ  GVP G +    DA+V++LKTR+             L WL+ QG +QIYFKYCSTFDST +GNIGPV DALM AL T FT+ +PA P N RTV++GYLF  +  L ESGM+HHP+ PMTD+ L R++ AQ+  + G++   V  +G +A+R  +  L++EG   A
Sbjct:    2 IKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAIDALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDALMDALDTPFTVFSPALPVNGRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEAQSTGRCGVVSAHVFEQGVDAVRQELARLQQEGYRYA 196          
The following BLAST results are available for this feature:
BLAST of EY729039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y1011_HAEIN1.823e-5151.30Uncharacterized protein HI1011 OS=Haemophilus infl... [more]
YGBK_ECOLI1.706e-4951.28Uncharacterized protein ygbK OS=Escherichia coli (... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-G07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729039 ID=EY729039; Name=EY729039; organism=Citrus sinensis; type=EST; length=867bp
TGGCGATCTCCACGCCCTCGCGCCGCAACGCATCGATGCGGCCTCGAATC
GCCTCGGCGCCACGCGCCACCACCGCATAGTCGATCAGGCCGACCTTGCG
CCGGGTCTGCGCCGACAGCACGCGCACCAGGTTGGCGTCGGTCATCGGCG
TCAGCGGATGATGCTGCATGCCCGATTCATTCAGCGGTACGTCGCCGGCG
AACAGGTAGCCCTTGAACACCGTGCGCTTGTTGTCCGGAAAGGCCGGCGT
GGCGATGGTGAAATCGGTGCCGAGCGCCGTCATCAGCGCGTCGGCGACCG
GGCCGATATTGCCCTGCGTCGTGCTGTCGAAGGTCGAGCAGTACTTGAAA
TATATCTGCTCGGCGCCCTGCGCGCGCAGCCATTCGAGCGCGGCCAGCGA
CTGCGCCACCGCGTCGGCGGCTGGCAAGGTGCGGGTCTTCAATGCCACCA
CGACCGCGTCGGCGGGCGTCTCCAGCGCGCCGTCGGGCACGCCGATGGCC
TGCACCGTGCGCATGCCGGCGCGCACCAGGTTGTTGGCCAGATCGGTGGC
GCCGGTGAAATCGTCGGCGATGCAGCCCAGCTTGATCGTCATGCGGACTC
CCGGCAGGTGATTCCGGGAAAGATCTTGATGACCGCGCTGTCGTCCTCGC
GCCCGTGTCCGGCGGCCGACGCCTGCATGAACATCTGGTGCGCCGGGGAC
GCCCACGGCAGCGAAACTTGCCGTGGGCGCGGTGTCCACACCAGGCCAGC
TTCTTGACGAAGAGTTCGCCGCGCCAGCGTCGGCTGGAGCGCGGGGGGCG
CTCGGCACGGGGCCGCGGCGCGCGCCCCGCGCCGCTGGCGCGGGCGGACG
TCATCGACTGGCCTCTG
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