EY729038

Overview
NameEY729038
Unique NameEY729038
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length445
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729038 vs. ExPASy Swiss-Prot
Match: AMPN_ECOLI (Aminopeptidase N OS=Escherichia coli (strain K12) GN=pepN PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 5.004e-22
Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 2
Query:    2 VRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGXEVPSXPGQPVKEP 280
            +RM  TLLG + F+KGM LYF+RHDG A TC+DF  AM DA++ + ++F  WYSQ+GTP + V   Y+ ET  Y+L      P+ P Q  K+P
Sbjct:  388 IRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQP 480          
BLAST of EY729038 vs. ExPASy Swiss-Prot
Match: AMPN_HAEIN (Aminopeptidase N OS=Haemophilus influenzae GN=pepN PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 8.833e-19
Identity = 43/91 (47.25%), Postives = 55/91 (60.44%), Query Frame = 2
Query:    2 VRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGXEVPSXPGQPVK 274
            +RM  TLLG QGF+KGM LY   +DG+A TCEDF +AM  AN+ +   F  WYSQ+GTP L ++ +Y  +T TY L      P    Q  K
Sbjct:  389 IRMLHTLLGEQGFQKGMQLYIAENDGKAATCEDFVSAMERANNLDLNQFRRWYSQSGTPELLISDAYDEKTHTYRLTVSQSTPPTADQMEK 479          
BLAST of EY729038 vs. ExPASy Swiss-Prot
Match: AMPN_CAUCR (Aminopeptidase N OS=Caulobacter crescentus GN=pepN PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 9.766e-18
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 2
Query:    2 VRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGXEVPSXPGQPVKEP 280
            +RM K +LG+  FRKG DLYF+RHDG+A T E F A   +A+  + + F  WY QAGTP + + ++Y A     +L         PGQP K+P
Sbjct:  390 IRMLKAILGAPAFRKGCDLYFQRHDGEATTVEAFIACFAEASGRDLSGFFGWYEQAGTPSVTIETAYDAAAGALTLTLTQSTSPTPGQPDKKP 482          
BLAST of EY729038 vs. ExPASy Swiss-Prot
Match: AMP1_PLAFQ (M1 family aminopeptidase OS=Plasmodium falciparum (isolate FcB1 / Columbia) PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 2.036e-15
Identity = 39/100 (39.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query:    2 VRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDA-------NDAEFANFLLWYSQAGTPRLKVTSSYSAETRTYSLEFGXEVPSXPGQPVKEP 280
            +RMY T+LG + ++KG D+Y K++DG   TCEDF  AM  A       N A    +LLW+SQ+GTP +    +Y AE + YS+           Q  K+P
Sbjct:  587 MRMYLTILGEEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKKADNSANLNQYLLWFSQSGTPHVSFKYNYDAEKKQYSIHVNQYTKPDENQKEKKP 686          
The following BLAST results are available for this feature:
BLAST of EY729038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
AMPN_ECOLI5.004e-2248.39Aminopeptidase N OS=Escherichia coli (strain K12) ... [more]
AMPN_HAEIN8.833e-1947.25Aminopeptidase N OS=Haemophilus influenzae GN=pepN... [more]
AMPN_CAUCR9.766e-1843.01Aminopeptidase N OS=Caulobacter crescentus GN=pepN... [more]
AMP1_PLAFQ2.036e-1539.00M1 family aminopeptidase OS=Plasmodium falciparum ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-G06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729038 ID=EY729038; Name=EY729038; organism=Citrus sinensis; type=EST; length=445bp
CGTTAGGATGTACAAAACCCTACTTGGGAGTCAAGGGTTCCGAAAGGGCA
TGGATCTTTATTTTAAGAGACATGACGGGCAAGCTGTAACCTGTGAAGAT
TTTTTTGCGGCCATGCGAGATGCAAATGATGCAGAATTTGCTAATTTCTT
ACTATGGTACTCCCAAGCTGGAACGCCTCGCTTGAAAGTCACTTCGTCCT
ATAGTGCTGAAACTCGTACTTATTCTTTGGAATTCGGTNCAGAGGTACCA
TCANCCCCGGGGCAGCCAGTGAAAGAACCATGTTCATCCCTGTGGCATAG
GTCTGCTGAACTNCAGTGGCANGGACATGCCACTTTCTTCTGTGTATCAT
ANTGGGAAATTGCATCTCTTGGGAGCACAATCAGCAGTCTACACACAGTT
CTTGAGTACCAAGAAGAAAAAAATTGTGTCTCTGATTATCCGAGC
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