EY729033

Overview
NameEY729033
Unique NameEY729033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729033 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 5.690e-49
Identity = 92/127 (72.44%), Postives = 103/127 (81.10%), Query Frame = 3
Query:  414 PKGVFPPEPEHYIGAXLKVAIIGAGLAGMSTAVELLDQGHDVDIYESRSVIGGKVXSXVDKRGDHIEMGLHVSFGCYNILFRLMKKVGAGQNLLVEGSYSYIW*IRVVEFGDLISGSPFGAPVHGDR 794
            PKG+FPPEPEHY G  LKVAIIGAGLAGMSTAVELLDQGH+VDIYESR  IGGKV S VDKRG+HIEMGLHV FGCYN LFRLMKKVGA +NLLV+  +++ +  R  E G+L    P GAP+HG R
Sbjct:   49 PKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRQFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADENLLVK-DHTHTFVNRGGEIGELDFRLPMGAPLHGIR 174          

HSP 2 Score: 35.4242 bits (80), Expect = 5.690e-49
Identity = 21/53 (39.62%), Postives = 30/53 (56.60%), Query Frame = 1
Query:  283 MGSSVLFPATSVTGVSWSRVQE----KCRRFCVRASLDANVSDMSVNAPRVCF 429
            M SS     +S  GV   +V+     + + F +R++LD  VSDMSVNAP+  F
Sbjct:    1 MASSTCLIHSSSFGVGGKKVKMNTMIRSKLFSIRSALDTKVSDMSVNAPKGLF 53          
BLAST of EY729033 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 3.636e-48
Identity = 87/131 (66.41%), Postives = 102/131 (77.86%), Query Frame = 3
Query:  414 PKGVFPPEPEHYIGAXLKVAIIGAGLAGMSTAVELLDQGHDVDIYESRSVIGGKVXSXVDKRGDHIEMGLHVSFGCYNILFRLMKKVGAGQNLLVEGSYSYIW*IRVVEFGDLISGSPFGAPVHGDRGIFV 806
            PKG+FPPEP  Y G  LKVAIIGAGLAGMSTAVELLDQGH+VDIY+SR+ IGGKV S VD+RG+HIEMGLHV FGCYN LFRLMKKVGA +NLLV+  +++ +  +    G+L    P GAP+HG R   V
Sbjct:   41 PKGLFPPEPVPYKGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLMKKVGAEKNLLVK-DHTHTFINKDGTIGELDFRFPVGAPIHGIRAFLV 170          

HSP 2 Score: 43.5134 bits (101), Expect = 3.636e-48
Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 1
Query:  283 MGSSVLFPATSVTGVSWSRVQEKCRRFCVRASLDANVSDMSVNAPRVCF 429
            M SSV+F AT     S S    K RRF V +SLD++VSDMSVNAP+  F
Sbjct:    1 MASSVVFAATG----SLSVPPLKSRRFYVNSSLDSDVSDMSVNAPKGLF 45          
BLAST of EY729033 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.322e-47
Identity = 93/141 (65.96%), Postives = 110/141 (78.01%), Query Frame = 3
Query:  414 PKGVFPPEPEHYIGAXLKVAIIGAGLAGMSTAVELLDQGHDVDIYESRSVIGGKVXSXVDKRGDHIEMGLHVSFGCYNILFRLMKKVGAGQNLLVEGSYSYIW*IRVVEFGDLISGSPFGAPVHGDRGIFVXESSLGTWIK 836
            PKG+FPPEPEHY G  LKVAIIGAGLAGMSTAVELLDQGH+VDIYESR+ IGGKV S VDK+G+HIEMGLHV FGCYN LFRL+KKVGA +NLLV+  +++ +  R  E G+L    P GAP+HG    F+  + L T+ K
Sbjct:   67 PKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKQGNHIEMGLHVFFGCYNNLFRLLKKVGAEKNLLVK-DHTHTFVNRGGELGELDFRFPVGAPLHGINA-FLTTNQLKTYDK 205          

HSP 2 Score: 33.4982 bits (75), Expect = 2.322e-47
Identity = 22/62 (35.48%), Postives = 29/62 (46.77%), Query Frame = 1
Query:  289 SSVLFPATSVTGVSWS---------------RVQEKCRRFCVRASLDANVSDMSVNAPRVCF 429
            +S+ FPATS  G   S                 + K R+  VR+ LD +VSDM  NAP+  F
Sbjct:   10 TSLCFPATSAAGARTSFRTTDTFLRYRRSRQLTRLKVRKAVVRSDLDRDVSDMRTNAPKGLF 71          
BLAST of EY729033 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 3.283e-46
Identity = 88/125 (70.40%), Postives = 103/125 (82.40%), Query Frame = 3
Query:  414 PKGVFPPEPEHYIGAXLKVAIIGAGLAGMSTAVELLDQGHDVDIYESRSVIGGKVXSXVDKRGDHIEMGLHVSFGCYNILFRLMKKVGAGQNLLVEGSYSYIW*IRVVEFGDLISGSPFGAPVHG 788
            PKG+FPPEPEHY G  LKVAIIGAGLAGMSTAVELLDQGH+VDIYESR+ IGGKV S VD+RG+HIEMGLHV FGCYN LFRL+KKVGA +NLLV+  +++ +  +  E G+L    P GAP+HG
Sbjct:   64 PKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLLKKVGAEKNLLVK-EHTHTFVNKGGEIGELDFRFPVGAPLHG 187          

HSP 2 Score: 31.187 bits (69), Expect = 3.283e-46
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:  355 RRFCVRASLDANVSDMSVNAPRVCF 429
            R+  +RA LD+ VSDMS NAP+  F
Sbjct:   44 RKSVIRADLDSMVSDMSTNAPKGLF 68          
BLAST of EY729033 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 4.278e-46
Identity = 94/141 (66.67%), Postives = 110/141 (78.01%), Query Frame = 3
Query:  414 PKGVFPPEPEHYIGAXLKVAIIGAGLAGMSTAVELLDQGHDVDIYESRSVIGGKVXSXVDKRGDHIEMGLHVSFGCYNILFRLMKKVGAGQNLLVEGSYSYIW*IRVVEFGDLISGSPFGAPVHGDRGIFVXESSLGTWIK 836
            PKG+FPPEPEHY G  LKVAIIGAGLAGMSTAVELLDQGH+VDIYESR+ IGGKV S VDKRG+HIEMGLHV FGCYN LFRLMKKVGA +NLLV+  +++ +  +  E G+L    P GAP+HG    F+  + L T+ K
Sbjct:   64 PKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGAEKNLLVK-EHTHTFVNKGGEIGELDFRFPVGAPLHGINA-FLSTNQLKTYDK 202          

HSP 2 Score: 27.7202 bits (60), Expect = 4.278e-46
Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  367 VRASLDANVSDMSVNAPRVCF 429
            +RA L++ VSDMS NAP+  F
Sbjct:   48 IRADLNSMVSDMSTNAPKGLF 68          
BLAST of EY729033 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.122e-38
Identity = 82/122 (67.21%), Postives = 97/122 (79.51%), Query Frame = 3
Query:  423 VFPPEPEHYIGAXLKVAIIGAGLAGMSTAVELLDQGHDVDIYESRSVIGGKVXSXVDKRGDHIEMGLHVSFGCYNILFRLMKKVGAGQNLLVEGSYSYIW*IRVVEFGDLISGSPFGAPVHG 788
            +FPPEPEHY G  LKVAIIGAGLAGMSTAVELLDQGH+VD+YESR  IGGKV S VD++G+HIEMGLHV FGCY+ LFRLMKKVGA  NLLV+  +++ +  +    G+L    P GAP+HG
Sbjct:   52 LFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDLYESRPFIGGKVGSFVDRQGNHIEMGLHVFFGCYSNLFRLMKKVGADNNLLVK-EHTHTFVNKGGTIGELDFRFPVGAPLHG 172          
BLAST of EY729033 vs. ExPASy Swiss-Prot
Match: ZDS_SYNY3 (Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803) GN=crtQ PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.423e-25
Identity = 64/115 (55.65%), Postives = 84/115 (73.04%), Query Frame = 3
Query:  462 LKVAIIGAGLAGMSTAVELLDQGHDVDIYESRSVIGGKVXSXVDKRGDHIEMGLHVSFGCYNILFRLMKKVGAGQNL-LVEGSYSYIW*IRVVEFGDLISGSPFGAPVHGDRGIF 803
            ++VAI+GAGLAGM+TAVEL+D GH+V++YE+RS IGGKV S VD  G+HIEMGLHV FGCY  LF LM+KVGA QNL L E +++++   +    G+L      GAP +G +  F
Sbjct:    1 MRVAIVGAGLAGMATAVELVDAGHEVELYEARSFIGGKVGSWVDGDGNHIEMGLHVFFGCYYNLFNLMEKVGAKQNLRLKEHTHTFV--NQGGRIGELDFRFLTGAPFNGLKAFF 113          
BLAST of EY729033 vs. ExPASy Swiss-Prot
Match: ZDS_ANASP (Zeta-carotene desaturase OS=Anabaena sp. (strain PCC 7120) GN=crtQ PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.167e-21
Identity = 48/87 (55.17%), Postives = 67/87 (77.01%), Query Frame = 3
Query:  462 LKVAIIGAGLAGMSTAVELLDQGHDVDIYESRSVIGGKVXSXVDKRGDHIEMGLHVSFGCYNILFRLMKKVGAGQNL-LVEGSYSYI 719
            ++VAI+GAGLAG++TA++L D G +V I+ESR  +GGKV S +D  G+H+EMGLHV FGCY  LF LM KVGA  +L L E +++++
Sbjct:    1 MRVAIVGAGLAGLATAIDLADAGCEVQIFESRPFVGGKVGSWIDGDGNHVEMGLHVFFGCYYQLFELMNKVGAFSHLRLKEHTHTFV 87          

HSP 2 Score: 22.7126 bits (47), Expect = 1.167e-21
Identity = 18/59 (30.51%), Postives = 24/59 (40.68%), Query Frame = 1
Query:  697 LKDHTHTFGKSGWWNLVT*FPVPHLELPYMGIAAFLFXNQA*ELG*SKKCPGPGLSPVV 873
            LK+HTHTF   G       F       P+ G+ AF   +Q       +     G SP+V
Sbjct:   79 LKEHTHTFVNKGGRTGALDFRF-FTGAPFNGLKAFFTTSQLSLQDKLQNAIALGTSPIV 136          
BLAST of EY729033 vs. ExPASy Swiss-Prot
Match: CRTI_SYNE7 (Phytoene dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=pds PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.322e-13
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 3
Query:  462 LKVAIIGAGLAGMSTAVELLDQGHDVDIYESRSVIGGKVXSXVDKRGDHIEMGLHVSFGCYNILFRLMKKVGAGQNL 692
            ++VAI GAGLAG+S A  L D GH   +YE R V+GGKV +  D+ GD  E GLH+ FG Y  + +L K++     L
Sbjct:    1 MRVAIAGAGLAGLSCAKYLADAGHTPIVYERRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNMLQLFKELNIEDRL 77          

HSP 2 Score: 21.1718 bits (43), Expect = 5.322e-13
Identity = 13/47 (27.66%), Postives = 21/47 (44.68%), Query Frame = 1
Query:  673 SVRDRIYLLKDHTHTFGKSGWWNLVT*FPVPHLELPYMGIAAFLFXN 813
            ++ DR+   K H+  F +       + F  P +  P  G+AA L  N
Sbjct:   72 NIEDRLQW-KSHSMIFNQPTKPGTYSRFDFPDIPAPINGVAAILSNN 117          
BLAST of EY729033 vs. ExPASy Swiss-Prot
Match: CRTI_NARPS (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=PDS1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.356e-12
Identity = 39/87 (44.83%), Postives = 51/87 (58.62%), Query Frame = 3
Query:  432 PEPEHYIGAXLKVAIIGAGLAGMSTAVELLDQGHDVDIYESRSVIGGKVXSXVDKRGDHIEMGLHVSFGCYNILFRLMKKVGAGQNL 692
            P PE      L+V ++GAGLAG+STA  L D GH   + ESR V+GGK+ +  DK GD  E GLH+ FG Y  +  L  ++G    L
Sbjct:   92 PRPEK----GLEVVVVGAGLAGLSTAKYLADAGHKPILLESRDVLGGKIAAWKDKDGDWYETGLHIFFGAYPNVQNLFGELGINDRL 174          
The following BLAST results are available for this feature:
BLAST of EY729033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ZDS_NARPS5.690e-4972.44Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_ARATH3.636e-4866.41Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_TARER2.322e-4765.96Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SOLLC3.283e-4670.40Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_CAPAN4.278e-4666.67Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_MAIZE1.122e-3867.21Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SYNY31.423e-2555.65Zeta-carotene desaturase OS=Synechocystis sp. (str... [more]
ZDS_ANASP1.167e-2155.17Zeta-carotene desaturase OS=Anabaena sp. (strain P... [more]
CRTI_SYNE75.322e-1346.75Phytoene dehydrogenase OS=Synechococcus elongatus ... [more]
CRTI_NARPS2.356e-1244.83Phytoene dehydrogenase, chloroplastic/chromoplasti... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-G01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729033 ID=EY729033; Name=EY729033; organism=Citrus sinensis; type=EST; length=910bp
ACCCACGCGTCCGAAACAAAGAAGTACTTTGCCATTTGCCAACCTCTCTA
AAACAGTTCAGTTCCCTGACAAAACTCTCTTCCTTAGCATCTTGTTAGAT
TCTGATACTCAAAGATACCCTTTTGTATTATTTTAGTTTCTTAATTAAAT
TTTGTTGATGTCGACGAATCTTTGTTGATATCAAAGAAAAATACTTTGTT
ATCGAAACAAAAGAGAGCAGAGCTGGGCTGAGCTGAATTGAGTTCCGATT
GAATTTCTTGATTTCAGCTCGGGATTTTCAATATGGGTTCTTCAGTTCTG
TTTCCTGCAACTTCAGTCACTGGTGTTAGTTGGTCTCGGGTTCAAGAGAA
GTGTCGAAGATTCTGTGTACGGGCTTCTTTGGACGCTAATGTTTCTGATA
TGAGTGTTAATGCCCCAAGGGTGTGTTTCCACCAGAACCAGAACATTATA
TAGGAGCANAGCTGAAAGTGGCTATTATTGGAGCTGGGCTTGCGGGCATG
TCAACGGCAGTGGAATTGTTGGATCAAGGCCACGACGTGGATATATATGA
GTCAAGGTCTGTTATTGGTGGTAAAGTGNGTTCATNTGTCGATAAACGTG
GAGACCATATTGAGATGGGCCTGCACGTTTCCTTTGGATGCTACAATATT
CTGTTCCGATTGATGAAAAAGGTCGGTGCGGGACAGAATTTACTTGTTGA
AGGATCATACTCATACATTTGGTAAATCAGGGTGGTGGAATTTGGTGACT
TGATTTCCGGTTCCCCATTTGGAGCTCCCGTACATGGGGATCGCGGCATT
TTTGTTCANGAATCAAGCTTAGGAACTTGGATAAAGCAAGAAATGCCCTG
GCCCTGGCCTGAGTCCGGTGGTAACGCCTTGTTGATCCTGATGGACCTTG
AAGGACTACA
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