EY729022

Overview
NameEY729022
Unique NameEY729022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY729022 vs. ExPASy Swiss-Prot
Match: Y3739_ARATH (Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana GN=At3g27390 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.805e-33
Identity = 63/74 (85.14%), Postives = 72/74 (97.30%), Query Frame = 1 
Query:  418 DVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAGLAIILWPLAVVGAVLGSMVTSIFLGAYAG 639
            D PVIS+VA+CKSPYMLFKGWHRLFHDLIGREGPFLET+CVP+AGLAI+LWPLAV GAV+GS+++SIFLGAYAG
Sbjct:  195 DPPVISLVAICKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAGLAILLWPLAVTGAVIGSVISSIFLGAYAG 268

HSP 2 Score: 83.1889 bits (204), Expect = 2.179e-15
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 2 
Query:   14 YDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIR 154
            YDGTWST++ SFT+VRDFKDVCFHSYFSLMD+L+Q   PD KYYEIR
Sbjct:  132 YDGTWSTMQRSFTVVRDFKDVCFHSYFSLMDELKQ-SCPDRKYYEIR 177
The following BLAST results are available for this feature:
BLAST of EY729022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3739_ARATH8.805e-3385.14Uncharacterized membrane protein At3g27390 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-E10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729022 ID=EY729022; Name=EY729022; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGTTTACGATGGGACTTGGAGCACGATTAAACACAGCTTCA
CTATTGTCAGAGATTTTAAAGATGTCTGTTTCCATTCCTACTTTTCACTT
ATGGATGATCTGCGACAGAAACAGGCTCCAGATGGAAAATATTATGAGAT
AAGGTGTGCTGTTTGCTTTTGCTGCTAAGAAATTCCTTTTTTAAGTCCAT
GTTGCTGCTATTATCCAATTCACGACAATCACTATGACATCACTCGGTAT
AATTTTTAGTTAACAGTGAGAATTAACCATCAAATCTGTTCATTTAGTAC
TTGTTATCCACTTTTGAATATCTCTTTTGCCTTTTAGATTGCCCTTTTCA
TTGACCGTGTATCAGATTGCTCTATATTCCTGGTGCCATCATTGCTGGGG
GGCTTGGTGTCCTGATTGATGTGCCAGTGATCTCAGTTGTTGCCCTATGC
AAAAGCCCTTATATGCTCTTTAAGGGGTGGCATCGTTTGTTTCATGACCT
TATAGGCCGAGAAGGTCCTTTCTTAGAGACTATATGCGTACCATTAGCTG
GCCTTGCTATCATACTCTGGCCATTGGCTGTTGTTGGGGCAGTTTTGGGC
TCCATGGTGACCAGTATCTTCCTTGGTGCTTATGCAGGGGGTGGTTGGTT
ATCAGGAATCCTCCCTTTGGTTCGGGCTTCGCTATATAATTGCAGCCCTT
GTCATTTATGATGAATACCGCAATGACATACTTGACATGCCAGAAAGATC
CTGCTTTCTAAGGCCCATTATCGAAAGAAGGCAGATCTCTCGCCGACCAG
TACTTTCTCAGGCCTAGCTCCTTCAAGATTCTCCTCTCGCACCATTCACT
TAGGAGCCCATTGATTTGAGCCCTTGAGCTTCTG
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