EY729020

Overview
NameEY729020
Unique NameEY729020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729020 vs. ExPASy Swiss-Prot
Match: MEPCE_HUMAN (7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.678e-30
Identity = 81/214 (37.85%), Postives = 116/214 (54.21%), Query Frame = 1
Query:  109 RKGKDVFPFGNYKNYYGYRIGQGLNEDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTE--------HNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLF-DIVSFKQENFVHGRD------SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGHFVLE 705
            +K +  F +GNY  YYGYR      ED R +VLK EWF G+D LD+GCN G +T+ IA K+    ++G+DIDS  +  A  ++R  +  E          +           + K      ++TA++    A       A+ ++F + V F   N+V  RD      +PE  YD +LCLS+TKW+HLNWGD+GL  +F RI++ LRPGG  VLE
Sbjct:  407 KKQQRKFQYGNYCKYYGYR--NPSCEDGRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPE--YDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLE 616          
BLAST of EY729020 vs. ExPASy Swiss-Prot
Match: MEPCE_MOUSE (7SK snRNA methylphosphate capping enzyme OS=Mus musculus GN=Mepce PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.420e-29
Identity = 83/212 (39.15%), Postives = 114/212 (53.77%), Query Frame = 1
Query:  127 FPFGNYKNYYGYRIGQGLNEDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSP------------AERNLF-DIVSFKQENFVHGRDS------PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGHFVLE 705
            F +GNY  YYGYR      ED R +VLK EWF+G+D LD+GCN G +T+ IA K+    ++G+DID   +  A    R+ +R   +E+ R  A   E     +G E  +T  +      S   S             A+ ++F + V F   N+V  RD       PE  YD +LC S+TKW+HLNWGD+GL  +F RI++ LRPGG  VLE
Sbjct:  390 FQYGNYCKYYGYR--NPSCEDVRLRVLKPEWFQGRDVLDLGCNVGHLTLSIACKWGPARMVGLDIDPRLIHSA----RQNIRHYLSEELRLQAQTSEGDPGTEGEEGTITVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDELVDAQRPE--YDVVLCFSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLE 593          
BLAST of EY729020 vs. ExPASy Swiss-Prot
Match: BIN3D_CAEEL (Probable methyltransferase Y17G7B.18 OS=Caenorhabditis elegans GN=Y17G7B.18 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.499e-28
Identity = 72/197 (36.55%), Postives = 103/197 (52.28%), Query Frame = 1
Query:  127 FPFGNYKNYYGYRIGQGLNEDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP----EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGHFVLE 705
            + +GN+  YYG R+  G   D R  V +K+WFE K  LDIGCN+G +T+ IA+ F+ R I+GIDID + +  A  ++R     E     +  AS         G++    + + E         P      D + FK+EN+V   D      +  +D IL LS+TKWIHLNWGDDG+   F R +  L PGG  ++E
Sbjct:  117 YRYGNFDRYYGIRLNPG-ESDKRLSVFQKDWFEHKQALDIGCNAGFLTLSIAKDFSPRRIIGIDIDEHLIGVARKNIRHYCDHETEVSGKFPAS--------FGVQFGTVSQRNEAPRSFSTKFP------DNIWFKKENYVLESDEMLDMIQPEFDVILALSITKWIHLNWGDDGMRRFFRRAYAQLHPGGRLIIE 298          
BLAST of EY729020 vs. ExPASy Swiss-Prot
Match: BN3D2_DROME (Probable methyltransferase CG1239 OS=Drosophila melanogaster GN=CG1239 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.893e-22
Identity = 75/205 (36.59%), Postives = 99/205 (48.29%), Query Frame = 1
Query:  112 KGKDV-FPFGNYKNYYGYRIGQGLNEDPRFKVL--KKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD----SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGHFVLE 705
            + KD+ F +GNYK+YYG RI      D R  VL  + + F  K  LDIGCNSG ++IQIA+KF  +S++G+DID   + DA        +T  + KR A          G G+                            + F   N+V   D         +D ILCLSVTKWIHLN+ D GL   F R++  LRPGG  +LE
Sbjct:   69 QNKDLNFKYGNYKHYYGKRILNKDFHDIRLDVLGTQPDLFRNKQLLDIGCNSGHLSIQIARKFEVKSLVGLDIDRGLINDAQ-------KTVSHLKRHAT--------PGQGIPH--------------------------IQFVHGNYVLEDDVLLEIERPQFDVILCLSVTKWIHLNFCDSGLKQAFRRMYLQLRPGGKLILE 232          
The following BLAST results are available for this feature:
BLAST of EY729020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MEPCE_HUMAN1.678e-3037.857SK snRNA methylphosphate capping enzyme OS=Homo s... [more]
MEPCE_MOUSE1.420e-2939.157SK snRNA methylphosphate capping enzyme OS=Mus mu... [more]
BIN3D_CAEEL3.499e-2836.55Probable methyltransferase Y17G7B.18 OS=Caenorhabd... [more]
BN3D2_DROME4.893e-2236.59Probable methyltransferase CG1239 OS=Drosophila me... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-E08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729020 ID=EY729020; Name=EY729020; organism=Citrus sinensis; type=EST; length=831bp
CCACGCGTCCGGATATATAATAATAAAACCCTAATTACAATGGTCAAGAA
AATAATGGAGAACAAAGTTGAAGAAGAAGAAAAGGGCGAAGCTCAACAAC
TTAAGAAAAGAAAGGGCAAAGACGTTTTTCCCTTCGGCAATTACAAAAAC
TACTACGGTTATCGCATTGGTCAGGGCTTGAACGAAGATCCTCGATTTAA
AGTGTTGAAAAAGGAATGGTTTGAAGGCAAAGATTGTCTCGATATTGGCT
GCAATAGTGGCATCATTACCATTCAAATTGCACAAAAGTTTAACTGCCGG
AGTATCCTTGGGATTGACATCGACTCTAATCGTGTTGCGGATGCATATTG
GCACCTTAGGAAAATTGTAAGAACGGAACATAATGAGAAAAGACGAGCGA
ATGCTTCTAGAGTGGAGGTTATAGAGAAAGGAGATGGTTTAGAGAAGAAC
GTAACTGCTGCACAAGAAGAGAAGAAGGCAATTTCAAGGAATTGTTCTCC
TGCAGAAAGAAATCTCTTTGACATAGTTTCTTTCAAACAGGAAAATTTTG
TACATGGTCGGGACTCACCGGAGAAGTACTATGATGCGATTCTCTGTTTG
AGCGTAACAAAATGGATACATTTGAATTGGGGTGATGATGGGTTGATTAC
TTTATTTATGAGGATATGGAAACTTCTTCGTCCGGGTGGGCATTTTGTGT
TGGAACTCNACCTTGGGTATCGGATTTGAAAGAATCGTCGTGTGTCTGAN
AACACAGCCACCATTTTCCAAATATCAGTTGTATCTCCAAAGAGTTCCCG
AAATTTCTCCTATAAAATGTGAGAGAGCGGN
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