EY729019

Overview
NameEY729019
Unique NameEY729019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length135
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729019 vs. ExPASy Swiss-Prot
Match: AROB_PSEFS (3-dehydroquinate synthase OS=Pseudomonas fluorescens (strain SBW25) GN=aroB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.668e-19
Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = -1
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QP  VLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH
Sbjct:  157 QPQAVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 201          
BLAST of EY729019 vs. ExPASy Swiss-Prot
Match: AROB_PSEU2 (3-dehydroquinate synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=aroB PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.266e-18
Identity = 42/45 (93.33%), Postives = 44/45 (97.78%), Query Frame = -1
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QP+VVLIDTA+LNTLP RELSAGLAEVIKYGLICDEPFLTWLEEH
Sbjct:  157 QPSVVLIDTASLNTLPERELSAGLAEVIKYGLICDEPFLTWLEEH 201          
BLAST of EY729019 vs. ExPASy Swiss-Prot
Match: AROB_PSESM (3-dehydroquinate synthase OS=Pseudomonas syringae pv. tomato GN=aroB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.823e-17
Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = -1
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QP+VVLIDT +LNTLP RELSAGLAEVIKYGLICDEPFLTWLEEH
Sbjct:  157 QPSVVLIDTTSLNTLPERELSAGLAEVIKYGLICDEPFLTWLEEH 201          
BLAST of EY729019 vs. ExPASy Swiss-Prot
Match: AROB_PSE14 (3-dehydroquinate synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=aroB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.823e-17
Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = -1
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QP+VVLIDT +LNTLP RELSAGLAEVIKYGLICDEPFLTWLEEH
Sbjct:  157 QPSVVLIDTTSLNTLPERELSAGLAEVIKYGLICDEPFLTWLEEH 201          
BLAST of EY729019 vs. ExPASy Swiss-Prot
Match: AROB_PSEF5 (3-dehydroquinate synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=aroB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.110e-17
Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = -1
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QPNVVLIDT +LNTLP RELSAGLAEVIKYGLICDEPFLTWLEE+
Sbjct:  157 QPNVVLIDTTSLNTLPSRELSAGLAEVIKYGLICDEPFLTWLEEN 201          
BLAST of EY729019 vs. ExPASy Swiss-Prot
Match: AROB_PSEPF (3-dehydroquinate synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=aroB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.182e-16
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = -1
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QPNVVLIDTA+L TLP RELSAGLAEVIKYGLICDEPFLTWLE++
Sbjct:  157 QPNVVLIDTASLKTLPARELSAGLAEVIKYGLICDEPFLTWLEDN 201          
BLAST of EY729019 vs. ExPASy Swiss-Prot
Match: AROB_PSEPW (3-dehydroquinate synthase OS=Pseudomonas putida (strain W619) GN=aroB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.307e-15
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = -1
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QPN VLIDT TLNTLP RELSAGLAEVIKYGLICD+PFL WLE++
Sbjct:  157 QPNAVLIDTTTLNTLPERELSAGLAEVIKYGLICDKPFLGWLEDN 201          
BLAST of EY729019 vs. ExPASy Swiss-Prot
Match: AROB_PSEAB (3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=aroB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.307e-15
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = -1
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QP  V+IDTA+L TLP RELSAGLAEVIKYG ICDEPF+TWLEEH
Sbjct:  157 QPQAVVIDTASLKTLPSRELSAGLAEVIKYGFICDEPFITWLEEH 201          
BLAST of EY729019 vs. ExPASy Swiss-Prot
Match: AROB_PSEA8 (3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=aroB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.307e-15
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = -1
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QP  V+IDTA+L TLP RELSAGLAEVIKYG ICDEPF+TWLEEH
Sbjct:  157 QPQAVVIDTASLKTLPSRELSAGLAEVIKYGFICDEPFITWLEEH 201          
BLAST of EY729019 vs. ExPASy Swiss-Prot
Match: AROB_PSEA7 (3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain PA7) GN=aroB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.307e-15
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = -1
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QP  V+IDTA+L TLP RELSAGLAEVIKYG ICDEPF+TWLEEH
Sbjct:  157 QPQAVVIDTASLKTLPARELSAGLAEVIKYGFICDEPFITWLEEH 201          
The following BLAST results are available for this feature:
BLAST of EY729019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
AROB_PSEFS9.668e-1995.563-dehydroquinate synthase OS=Pseudomonas fluoresce... [more]
AROB_PSEU26.266e-1893.333-dehydroquinate synthase OS=Pseudomonas syringae ... [more]
AROB_PSESM1.823e-1791.113-dehydroquinate synthase OS=Pseudomonas syringae ... [more]
AROB_PSE141.823e-1791.113-dehydroquinate synthase OS=Pseudomonas syringae ... [more]
AROB_PSEF53.110e-1791.113-dehydroquinate synthase OS=Pseudomonas fluoresce... [more]
AROB_PSEPF1.182e-1688.893-dehydroquinate synthase OS=Pseudomonas fluoresce... [more]
AROB_PSEPW1.307e-1584.443-dehydroquinate synthase OS=Pseudomonas putida (s... [more]
AROB_PSEAB1.307e-1582.223-dehydroquinate synthase OS=Pseudomonas aeruginos... [more]
AROB_PSEA81.307e-1582.223-dehydroquinate synthase OS=Pseudomonas aeruginos... [more]
AROB_PSEA71.307e-1582.223-dehydroquinate synthase OS=Pseudomonas aeruginos... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-E07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729019 ID=EY729019; Name=EY729019; organism=Citrus sinensis; type=EST; length=135bp
ATGCTCTTCAAGCCAGGTCAGGAACGGCTCGTCGCAGATCAGGCCGTACT
TGATGACTTCCGCCAGGCCCGCCGACAGCTCGCGGGGCGGCAGGGTATTG
AGGGTGGCGGTGTCGATCAGCACCACATTCGGCTG
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