EY729011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729011 vs. ExPASy Swiss-Prot
Match: RK3B_ARATH (50S ribosomal protein L3-2, chloroplastic OS=Arabidopsis thaliana GN=RPL3B PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 8.442e-45 Identity = 87/114 (76.32%), Postives = 89/114 (78.07%), Query Frame = -3 Query: 369 ASLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKPDVKLLPFPTYFAAEDEKMEELEPLVADLGETDPFMTAD 710 ASLSHRS GSTGQRDAPGKVF QRTVKNVWVYKIDPARNLMWVRGQVPGA GNFVFIKDA KKPD+ LPFPTY A EDE ELEPLVADLGE DPFM A+ Sbjct: 211 ASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAWCKKPDISKLPFPTYLAPEDEDPSELEPLVADLGEVDPFMLAE 324 HSP 2 Score: 25.7942 bits (55), Expect = 8.442e-45 Identity = 13/28 (46.43%), Postives = 17/28 (60.71%), Query Frame = -1 Query: 710 DITVPRKGK-VSGWNEKMGXKGMPASHG 790 D+T +GK G ++ G GMPASHG Sbjct: 183 DVTGITRGKGFQGCMKRHGFSGMPASHG 210
BLAST of EY729011 vs. ExPASy Swiss-Prot
Match: RL3_MAGSA (50S ribosomal protein L3 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rplC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.778e-12 Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = -3 Query: 459 SLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKK-PDVKLLPFP 707 S+SHRS GSTGQR PGKVF +Q T +N+ V D R L+ V+G VPG G++V ++DAV +K PD +PFP Sbjct: 138 SVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLTVVSTDADRGLILVKGSVPGHEGSWVLVRDAVKRKLPDG--VPFP 219 HSP 2 Score: 23.483 bits (49), Expect = 2.778e-12 Identity = 8/23 (34.78%), Postives = 14/23 (60.87%), Query Frame = -2 Query: 688 GGMKRWGXKECQHLMGIIIASKS 756 GGMKRW + + G+ ++ +S Sbjct: 121 GGMKRWNFRGLEATHGVSVSHRS 143
BLAST of EY729011 vs. ExPASy Swiss-Prot
Match: RL3_ERYLH (50S ribosomal protein L3 OS=Erythrobacter litoralis (strain HTCC2594) GN=rplC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.107e-12 Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = -3 Query: 387 SLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKPDVKLLPFPTYFAAEDEKMEELEPLVADLGETD 707 S+SHRS GSTG R PG+VF +QRT +N+ V + DP R L++V+G VPG +++ I+DAV K P + +PFP ++ +E + AD + D Sbjct: 139 SISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEVVRTDPERGLIFVKGSVPGTKNSWMLIRDAV-KLPLPEGVPFPGAVVEKNAPAKEADAPAADEQKLD 244
BLAST of EY729011 vs. ExPASy Swiss-Prot
Match: RL3_ACICJ (50S ribosomal protein L3 OS=Acidiphilium cryptum (strain JF-5) GN=rplC PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.332e-11 Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = -3 Query: 495 SLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAV 707 S+SHRSLGSTG R PGK F ++ T N+ V ID ARNL+ ++G VPGA +V ++DAV Sbjct: 141 SISHRSLGSTGNRQDPGKTFKNKKMAGHLGGERITTLNLEVAAIDEARNLIMIKGAVPGAKDGYVLVRDAV 211 HSP 2 Score: 23.483 bits (49), Expect = 1.332e-11 Identity = 9/23 (39.13%), Postives = 14/23 (60.87%), Query Frame = -2 Query: 688 GGMKRWGXKECQHLMGIIIASKS 756 GGMKRW + + G+ I+ +S Sbjct: 124 GGMKRWNFRGLEASHGVSISHRS 146
BLAST of EY729011 vs. ExPASy Swiss-Prot
Match: RL3_PARDP (50S ribosomal protein L3 OS=Paracoccus denitrificans (strain Pd 1222) GN=rplC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.535e-11 Identity = 44/107 (41.12%), Postives = 56/107 (52.34%), Query Frame = -3 Query: 387 SLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKPDVKLLPFPTYFAAEDEKMEELEPLVADLGETD 707 S+SHRS GSTGQ PGKVF + T +N+ V K D R L+ V+G VPG+ G +V IKDAV KKP + FP ++ + E P A E D Sbjct: 139 SISHRSHGSTGQCQDPGKVFKGKKMAGHLGAVRVTTQNLQVVKTDAERGLIMVKGSVPGSKGGWVTIKDAV-KKPLAESTVFPAATRSKAVQAEAAAPAEAAAPEGD 244
BLAST of EY729011 vs. ExPASy Swiss-Prot
Match: RL3_SPHWW (50S ribosomal protein L3 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rplC PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11 Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = -3 Query: 459 SLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKPDVKLLPFP 707 S+SHRSLGSTGQR PGKVF K RT +N+ + + D R L++V+G VPG+ G ++ +KD+V K K PFP Sbjct: 138 SVSHRSLGSTGQRQDPGKVFKNKKMAGHMGDKNRTQQNLEIVQTDAERGLLFVKGSVPGSKGGWLLVKDSV-KIAAPKDAPFP 219
BLAST of EY729011 vs. ExPASy Swiss-Prot
Match: RL3_MESSB (50S ribosomal protein L3 OS=Mesorhizobium sp. (strain BNC1) GN=rplC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.647e-11 Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = -3 Query: 396 SLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKKPDVKLLPFPTYFAAEDEKMEELEPLVADLG 707 S+SHR+ GSTGQR PGKVF ++ T +N+ V D R L+ VRG VPG+ G+++ ++DAV K P K P P A + E+ A G Sbjct: 138 SVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDRRVTTQNLEVVSTDTERGLILVRGAVPGSKGSWIMVRDAV-KAPLPKEAPLPAAIRASNNNAEKAAATAAGEG 240
BLAST of EY729011 vs. ExPASy Swiss-Prot
Match: RL3_GRABC (50S ribosomal protein L3 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=rplC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.375e-11 Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = -3 Query: 486 SLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKK 707 S+SHRS GSTG R PGK F ++ T +NV V +D AR L+ +RG +PGA G +V ++DAV +K Sbjct: 138 SISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTQNVEVAHVDAARGLLMIRGSIPGAKGGYVLVRDAVKRK 211
BLAST of EY729011 vs. ExPASy Swiss-Prot
Match: RL3_METNO (50S ribosomal protein L3 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rplC PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 8.247e-11 Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = -3 Query: 486 SLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKK 707 S+SHRS+GSTG R PGK F ++ T +N+ V + DP R L+ V G VPG +G ++ ++DAV +K Sbjct: 138 SISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVVRTDPERGLILVEGAVPGVAGGWIHVRDAVKRK 211 HSP 2 Score: 21.557 bits (44), Expect = 8.247e-11 Identity = 9/23 (39.13%), Postives = 13/23 (56.52%), Query Frame = -2 Query: 688 GGMKRWGXKECQHLMGIIIASKS 756 GGMKRW + G+ I+ +S Sbjct: 121 GGMKRWNFGGLRASHGVSISHRS 143
BLAST of EY729011 vs. ExPASy Swiss-Prot
Match: RL3_METS4 (50S ribosomal protein L3 OS=Methylobacterium sp. (strain 4-46) GN=rplC PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 8.251e-11 Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = -3 Query: 486 SLSHRSLGSTGQRDAPGKVFXXXXXXXXXXXKQRTVKNVWVYKIDPARNLMWVRGQVPGASGNFVFIKDAVYKK 707 S+SHRS+GSTG R PGK F ++ T +N+ V + DP R L+ V G VPG +G ++ I+DAV +K Sbjct: 138 SISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVVRTDPERGLILVEGAVPGVAGGWIQIRDAVKRK 211 HSP 2 Score: 21.9422 bits (45), Expect = 8.251e-11 Identity = 9/23 (39.13%), Postives = 13/23 (56.52%), Query Frame = -2 Query: 688 GGMKRWGXKECQHLMGIIIASKS 756 GGMKRW + G+ I+ +S Sbjct: 121 GGMKRWNFGGLRATHGVSISHRS 143 The following BLAST results are available for this feature:
BLAST of EY729011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729011 ID=EY729011; Name=EY729011; organism=Citrus sinensis; type=EST; length=895bpback to top |