EY728998

Overview
NameEY728998
Unique NameEY728998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: RH13_ARATH (DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana GN=RH13 PE=2 SV=2)

HSP 1 Score: 344.739 bits (883), Expect = 1.195e-96
Identity = 172/245 (70.20%), Postives = 202/245 (82.45%), Query Frame = 3
Query:   12 DDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSYXGQSEQTQNCVTVSSLQRKKRQHLYF 746
            DD  EE V E EI  EF AW+ +RLHPLLMKSIYRL FKEPT IQKAC   AA+QGKDVIGAAETGSGKTLAFGLPI+QRLL+EREK  K+   KGEEA+KYA  G+LRALIITPTRELALQVT+HL+  AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGRLWELMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+    G+++  ++  TV ++ +KKRQ   F
Sbjct:  173 DDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVF 417          

HSP 2 Score: 29.6462 bits (65), Expect = 1.195e-96
Identity = 13/19 (68.42%), Postives = 17/19 (89.47%), Query Frame = 2
Query:  719 EKEKTTLVFSATIALSADF 775
            +K++ T VFSATIALS+DF
Sbjct:  409 KKKRQTFVFSATIALSSDF 427          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: RH13_ORYSJ (DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. japonica GN=Os04g0510400 PE=2 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 4.998e-86
Identity = 158/230 (68.70%), Postives = 184/230 (80.00%), Query Frame = 3
Query:   57 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSYXGQSEQTQNCVTVSSLQRKKRQHLYF 746
            E  AW ELRLHPLL+ ++ RL FKEPTPIQKAC PAAAHQGKDVIGAAETGSGKTLAFGLPI+QRLLEE+EKA ++  +     ++ + +  LRALI+TPTRELA QV DHLK  AK + ++VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HL++LH+LSFFVLDEADRMIE GHF ELQSII+MLP+TNGS       T +C TV  LQ KKRQ   F
Sbjct:  196 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVF 425          

HSP 2 Score: 27.7202 bits (60), Expect = 4.998e-86
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  722 KEKTTLVFSATIALSADF 775
            K++ T VFSAT+ALSA+F
Sbjct:  418 KKRQTFVFSATLALSANF 435          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: RH13_ORYSI (DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. indica GN=OSIGBa0157K09-H0214G12.9 PE=2 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 4.998e-86
Identity = 158/230 (68.70%), Postives = 184/230 (80.00%), Query Frame = 3
Query:   57 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSYXGQSEQTQNCVTVSSLQRKKRQHLYF 746
            E  AW ELRLHPLL+ ++ RL FKEPTPIQKAC PAAAHQGKDVIGAAETGSGKTLAFGLPI+QRLLEE+EKA ++  +     ++ + +  LRALI+TPTRELA QV DHLK  AK + ++VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HL++LH+LSFFVLDEADRMIE GHF ELQSII+MLP+TNGS       T +C TV  LQ KKRQ   F
Sbjct:  196 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVF 425          

HSP 2 Score: 27.7202 bits (60), Expect = 4.998e-86
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  722 KEKTTLVFSATIALSADF 775
            K++ T VFSAT+ALSA+F
Sbjct:  418 KKRQTFVFSATLALSANF 435          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: DDX24_DICDI (ATP-dependent RNA helicase ddx24 OS=Dictyostelium discoideum GN=ddx24 PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.645e-52
Identity = 104/232 (44.83%), Postives = 150/232 (64.66%), Query Frame = 3
Query:   21 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKG---------------EEAEKYAPKGH------LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 653
            ++ +  E +   +   WN   L PL++K +  L F +PT IQ + IP A   G DVIGAA+TGSGKTLAFG+P++QR+L+   K  + +E+K                EE E+   +G       L +L+I PTRELA+QVT+H+K +    N++V+ IVGGM++++Q+R+L  RPE+VV TPGRLWEL++ G +HLVEL +L    +DEADRM+E GHF EL+SI+  LP+
Sbjct:  280 QKTISKEEQDQLDMSEWNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSGYDVIGAAQTGSGKTLAFGIPMVQRILQHLRKHGQNVENKANKQQNDNDDENEDVEEEEEEEEEEGRSKEYRKLFSLVICPTRELAIQVTNHIKSIISHTNLKVISIVGGMASQRQQRVLSKRPEIVVATPGRLWELITEGHQHLVELESLLCLGIDEADRMVEQGHFAELESILKTLPI 511          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: MAK5_ASPTN (ATP-dependent RNA helicase mak5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=mak5 PE=3 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.725e-41
Identity = 86/206 (41.75%), Postives = 131/206 (63.59%), Query Frame = 3
Query:   39 EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 647
            E +   +  AW  L L P ++ S+ +L+F  PT +QK+CIP     G DV+G A TGSGKTLAFG+PI++  LE++ +  K  +DK E +          ALI++PTRELA Q+  H+  V   A G+N R+  + GG+S +KQ+RLL    ++V+GTPGR+WE++SGG+  + ++  + + V+DEADR++  GHF+E   I+  L
Sbjct:  194 EEDDGVDISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPPIL-DGHDVVGKASTGSGKTLAFGIPILEYYLEKKRRETKNKDDKKETSPI--------ALILSPTRELAHQLVKHIGEVITHAPGVNARIALLTGGLSVQKQQRLLNGA-DIVIGTPGRVWEVLSGGQGLISKMKEIKYLVVDEADRLLSEGHFKEAHEILAAL 389          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: MAK5_NEOFI (ATP-dependent RNA helicase mak5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mak5 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.013e-40
Identity = 90/234 (38.46%), Postives = 145/234 (61.97%), Query Frame = 3
Query:   39 EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR-ALIITPTRELALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP-MTNGSYXGQSEQTQNCVTVSSLQRK 725
            E +   +  AW+ L L P ++  + +++F  PT +Q+ACIP    +G DVIG A TGSGKTLAFG+PI++  LE++       +D   E EK + K     ALI++PTRELA Q++ H+  +   A G+N R+  + GG+S +KQ+RLL    ++V+GTPGR+WE++S G+  + ++  + F V+DEADR++  GHF+E++ I++ L  + +G   G   Q     +  S +R+
Sbjct:  193 EEDDGADVSAWDSLGLSPEILTGLSKMKFASPTSVQEACIPQIL-EGHDVIGKASTGSGKTLAFGIPILEHYLEKKR------DDISAEKEKKSEKDSTPIALILSPTRELAHQLSKHIGELIAQAPGVNARIALLTGGLSVQKQQRLLSGA-DIVIGTPGRVWEILSTGQGLIRKMQQIKFLVVDEADRLLSEGHFKEVEEILNALDRVEDGEVPGGENQASEEESDPSSERQ 418          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: MAK5_ASPNC (ATP-dependent RNA helicase mak5 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=mak5 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.145e-39
Identity = 93/240 (38.75%), Postives = 146/240 (60.83%), Query Frame = 3
Query:   39 EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA---KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP-MTNGSYXGQSEQTQNCVTVSSLQRKKRQHLYF 746
            E +   +  AW  L L P ++ S+ +++F  PT +QK+CIP     G DVIG A TGSGKTLAFG+PI++  LE+R +  +    K E+ +  AP     ALI++PTRELA Q+  H+  +A    G N R+  + GG+S +KQ+R+L A  ++V+GTPGR+WE++S G+  + ++  + F V+DEADR++  GHF+E + I+  L  +  G++ G+  + +         R +RQ L F
Sbjct:  184 EDDDGVDVSAWESLGLSPEILTSLSKMKFTTPTLVQKSCIPQIL-DGHDVIGKASTGSGKTLAFGIPILEHYLEKRRQDLRA--GKEEKKKDTAPI----ALIMSPTRELAHQLAKHIGELALHAPGSNARIALLTGGLSVQKQQRVL-AGADIVIGTPGRVWEVLSSGQGLIRKMSEIKFLVIDEADRLLSEGHFKEAEEILGALDRVEEGNFGGEESEDEE----KEDARSERQTLVF 411          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: MAK5_EMENI (ATP-dependent RNA helicase mak5 OS=Emericella nidulans GN=mak5 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.495e-39
Identity = 92/218 (42.20%), Postives = 134/218 (61.47%), Query Frame = 3
Query:    6 VRDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLE-EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 647
            + D+A+++         +  AW  L L P  + S+ +L+F  PT +QK+CIP     G DVIG A TGSGKTLAFGLPI++  LE ER K      D  EE EK        ALI++PTRELA Q+  H+ G+   A G+N R   + GG+S +KQ+RLL+   ++V+GTPGR+WE++  G+  +  +  + F V+DEADR++  GHF+E++ I+  L
Sbjct:  185 LEDEADDD-------GADISAWEPLGLSPETLTSLSKLKFSTPTSVQKSCIPPIL-DGHDVIGKASTGSGKTLAFGLPILEHYLERERRKTI----DSEEEKEKIPI-----ALILSPTRELAHQLQKHIYGLISNAPGVNARTALLTGGLSVQKQQRLLETA-DIVIGTPGRVWEVLRTGQGLIRRMQGIKFLVIDEADRLLSEGHFKEVEDILSSL 384          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: MAK5_COCIM (ATP-dependent RNA helicase MAK5 OS=Coccidioides immitis GN=MAK5 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.495e-39
Identity = 99/245 (40.41%), Postives = 139/245 (56.73%), Query Frame = 3
Query:   30 LVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI---IDMLPMTNGSYXGQSEQTQNCVTVSSLQRKKRQHLYF 746
            L +E E   +  AW+ L L   L  S+ RL+F  PTPIQ ACIPA   QG DVIG A TGSGKTLAFG+PI++  L +          +  E+ K        ALI++PTRELA Q+  HL  +   A    VR+  + GG+S  KQ+RLL A  ++++ TPGRLWE++      L +L  + F V+DEADR++  GHF+E++ I   ID + +T  +Y  +SE+          + + RQ L F
Sbjct:  179 LQDEVEEDVDVSAWDSLDLSAELQTSLGRLKFSSPTPIQSACIPAVL-QGHDVIGKASTGSGKTLAFGIPIVEYFLGKYRGGRAPTASEERESTKEP-----MALILSPTRELAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLL-ADADIIIATPGRLWEVVGSMTGFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGERSEREPEPEPDEEKKAEPRQTLVF 416          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: MAK5_CRYNE (ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans GN=MAK5 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.551e-39
Identity = 91/205 (44.39%), Postives = 121/205 (59.02%), Query Frame = 3
Query:   69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-------------NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 644
            W+ + LHP L +S     F  PT IQ   IPA    G+DV+G AETGSGKTLA+ LPI+  LL +R+  A +             K  L AL++ PTRELALQV DHL  + K                V V  +VGG+S +KQ+R+L+   +V+V TPGRLW+L+   ++    + TL F V+DEADRMIENGHF EL+SI+ +
Sbjct:  174 WSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGI-TGRDVVGVAETGSGKTLAYSLPILHYLLGQRKSKAGI-------------KRPLSALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQKRILERGCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGHFAELESIVKL 364          
The following BLAST results are available for this feature:
BLAST of EY728998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RH13_ARATH1.195e-9670.20DEAD-box ATP-dependent RNA helicase 13 OS=Arabidop... [more]
RH13_ORYSJ4.998e-8668.70DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sa... [more]
RH13_ORYSI4.998e-8668.70DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sa... [more]
DDX24_DICDI7.645e-5244.83ATP-dependent RNA helicase ddx24 OS=Dictyostelium ... [more]
MAK5_ASPTN2.725e-4141.75ATP-dependent RNA helicase mak5 OS=Aspergillus ter... [more]
MAK5_NEOFI3.013e-4038.46ATP-dependent RNA helicase mak5 OS=Neosartorya fis... [more]
MAK5_ASPNC1.145e-3938.75ATP-dependent RNA helicase mak5 OS=Aspergillus nig... [more]
MAK5_EMENI1.495e-3942.20ATP-dependent RNA helicase mak5 OS=Emericella nidu... [more]
MAK5_COCIM1.495e-3940.41ATP-dependent RNA helicase MAK5 OS=Coccidioides im... [more]
MAK5_CRYNE2.551e-3944.39ATP-dependent RNA helicase MAK5 OS=Cryptococcus ne... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-C08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728998 ID=EY728998; Name=EY728998; organism=Citrus sinensis; type=EST; length=828bp
CACGCGTCCGAGATGATGCTGAAGAAGAGTTAGTCAATGAAGCTGAAATT
TCAACAGAATTTGATGCATGGAATGAATTAAGGCTTCATCCTCTGCTTAT
GAAATCAATTTACAGGCTTCAGTTCAAGGAACCAACCCCAATTCAGAAAG
CATGTATTCCTGCTGCAGCTCATCAAGGGAAGGATGTAATTGGTGCGGCT
GAGACAGGGTCTGGTAAAACGCTTGCTTTTGGTTTGCCCATTATGCAACG
TCTATTAGAAGAACGAGAAAAAGCTGCAAAGATGCTGGAAGACAAAGGGG
AGGAAGCAGAAAAATATGCTCCAAAAGGGCATTTGAGAGCTCTTATCATT
ACCCCTACGAGGGAACTTGCACTTCAGGTCACTGATCACTTAAAGGGAGT
TGCTAAGGGTATCAATGTTAGGGTGGTTCCTATTGTTGGTGGAATGTCAA
CAGAGAAGCAGGAAAGACTTTTAAAAGCAAGGCCTGAGGTGGTTGTTGGA
ACTCCCGGGAGGTTGTGGGAACTTATGTCAGGAGGAGAAAAACATCTTGT
TGAGTTACATACACTGTCGTTCTTTGTGCTGGATGAGGCTGATCGAATGA
TTGAAAATGGACATTTTCGAGAGTTGCAGTCAATAATTGACATGCTTCCT
ATGACCAATGGCTCCTATAANGGGCAGTCTGAACAAACACAAAATTGTGT
TACAGTTTCCAGCTTGCAGAGAAAGAAAAGACAACACTTGTATTTTCTGC
AACTATAGCCTTATCAGCTGATTTCGTAAGAAGCTAAGCATGGTCGCTAA
ATCGAAGCATCGGTTAATGGAATTAATC
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