EY728996

Overview
NameEY728996
Unique NameEY728996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728996 vs. ExPASy Swiss-Prot
Match: KING1_ARATH (SNF1-related protein kinase regulatory subunit gamma 1 OS=Arabidopsis thaliana GN=KING1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 44/123 (35.77%), Postives = 75/123 (60.98%), Query Frame = 3 
Query:  315 DFYKVILQEEPFKSTTVRSIIKSYRWAPFLPVATDDXXXXXXXXXXKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSDEVITIQSNELILEPFKRMK 683
            +F++V+   E +K+T VR I  ++RWAPFL +  ++          KY+++++P+++ G   I+N ITQS V+  L  C G  WF+    + +S++GLP MS D +I I  +E +L+ FK M+
Sbjct:  163 NFFEVLTSSELYKNTKVRDISGTFRWAPFLALQKENSFLTMLLLLSKYKMKSIPVVDLGVAKIENIITQSGVIHMLAECAGLLWFEDWGIKTLSEVGLPIMSKDHIIKIYEDEPVLQAFKLMR 285
The following BLAST results are available for this feature:
BLAST of EY728996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
KING1_ARATH1.968e-1935.77SNF1-related protein kinase regulatory subunit gam... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-C05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728996 ID=EY728996; Name=EY728996; organism=Citrus sinensis; type=EST; length=904bp
CCACGCGTCCGGCACCATCTAGTTCGGATTGGAAGGAAAGGTACCTAGGG
ATTGTAGATTACTCAGCAATCATTCTTTGGGTGTTAGAGACTGCAGAACT
TGCTGCTGCTGCCTTCTCAGTGGGCACTGCAACAGCTGCTGGTGTAGGTA
CTGGAACAGTTGGTGCTCTTGGAGCACTAGCATTAGGCATGACAGGTCCT
GCTGCAGTTGCTGGGCTAACTGTTGCTGCAGCAGGTGCTGCTGTGGCTGG
TGGTCTANCTGCAGAAAAAGGGGCAGGAAAAGACGCTCCCACAGCTGCTG
ATAGACTACATGAGGATTTTTACAAAGTTATCCTTCAAGAAGAACCTTTC
AAGTCGACTACAGTGAGGTCAATAATTAAGTCCTATCGCTGGGCACCTTT
CCTTCCAGTTGCAACAGATGATTCTATGCTGAGCGTCTTACTGCTGCTCT
CAAAATATAGGTTGAGAAACGTACCTATCATTGAACCAGGCACGCCTGAT
ATTAAGAACTACATTACTCAATCAGCAGTTGTTCAGGGTCTGGAAGGATG
CAAAGGAAGGGACTGGTTTGACATTATTGCTTCACAACCTATTTCTGATC
TAGGGCTTCCGTTCATGTCTTCTGATGAGGTTATTACCATACAGAGCAAT
GAACTGATTCTGGAACCTTTCAAACGGATGAAAGATAACATATTGGTGGC
ATCCAGTCCTATAAGGGACAACAAAAAAAATTGTGGGAGAATGTAAGATT
AGAGATATCGACACTTGCTGCTCCAACACGAACTCTTCTCCATTTCAAGC
CCCTCTAGGGCCCAAATACACCAAAACTGGGGTGGCCCCACCCCCCCAAA
TCCTGGAAAGTCCCCCACCATAACATGCCCGTCGGATTAACTCCCTGTGT
TTTT
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