EY728985

Overview
NameEY728985
Unique NameEY728985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728985 vs. ExPASy Swiss-Prot
Match: Y1051_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI1051 OS=Haemophilus influenzae GN=HI1051 PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 1.021e-57
Identity = 112/208 (53.85%), Postives = 157/208 (75.48%), Query Frame = 1
Query:    1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDASMEEVAEAIHRAGASEFIDSMEH-----GYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQFSDALDEVA 609
            +++LLLR Y+ QQG++ +DG++V +V Q SL +QIGL+ Q+  L HRS+R+NI YGR +A+ EE+  A  RA A++FI  +       GY++ VGERGVKLSGGQRQRIAIARV+LK+APIL++DEATS+LDS  E  IQ+ LD++ME+KTV+ +AHRLST+A +DR++V D G+++E G+H +LL   G YA+LW+ Q    L E A
Sbjct:  406 IVNLLLRFYEAQQGEITIDGQNVLNVQQESLRRQIGLVTQDTSLLHRSVRDNIIYGRPNATDEEMVLAAERAEAADFIPFLSDSQGRKGYDAHVGERGVKLSGGQRQRIAIARVMLKDAPILLLDEATSALDSEVEVAIQESLDKMMENKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHAELLELNGLYAKLWNHQSGGFLSESA 613          
BLAST of EY728985 vs. ExPASy Swiss-Prot
Match: YGAD_BACSU (Putative multidrug export ATP-binding/permease protein ygaD OS=Bacillus subtilis GN=ygaD PE=3 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.168e-53
Identity = 102/194 (52.58%), Postives = 143/194 (73.71%), Query Frame = 1
Query:    1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDASMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQ 582
            L+SL+ R YDV  G++L+DG D+RD    SL  Q+G++ Q+  LF  +IRENI  G+ DA++EE+ EA   A A EFI S   GYE+ VGERGVKLSGGQ+QRI+IARV LKN P+L++DEATS+LD  +E +IQ+ +D++ +D+T  VVAHRLST+ H D+I+V +NG +IE G+H++L+    QY  L++ Q
Sbjct:  384 LVSLIPRFYDVTSGRLLIDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIIEAAKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVMENGTIIEIGTHDELMDYESQYKHLFTIQ 577          
BLAST of EY728985 vs. ExPASy Swiss-Prot
Match: MSBA_METFK (Lipid A export ATP-binding/permease protein msbA OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=msbA PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.292e-52
Identity = 105/196 (53.57%), Postives = 150/196 (76.53%), Query Frame = 1
Query:    1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRL-DASMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQF 585
            L++LL R Y+VQQG+VL+DG DVR+++  SL QQ  L+ Q+  LF+ ++  NI YG L +AS E+V  A   A A +FI  + +G +S +G+RGV+LSGGQRQR+AIAR +LKNAPIL++DEATS+LD+ +ER +Q  LDE+M+++T +V+AHRLST+ + DRI+V + GR+IE GSHE+LL   G YA+L+ +QF
Sbjct:  387 LVNLLPRFYEVQQGRVLIDGVDVRNMSLKSLRQQFSLVSQDVILFNDTVFNNIAYGVLRNASEEDVIAAAKAAHAWDFIQQLPNGLQSEIGDRGVRLSGGQRQRLAIARAILKNAPILLLDEATSALDTESERHVQAALDELMQNRTSIVIAHRLSTIENADRIMVMEQGRIIEGGSHEELLALDGHYAKLYRKQF 582          
BLAST of EY728985 vs. ExPASy Swiss-Prot
Match: MSBA_SYNAS (Lipid A export ATP-binding/permease protein msbA OS=Syntrophus aciditrophicus (strain SB) GN=msbA PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.094e-51
Identity = 98/197 (49.75%), Postives = 144/197 (73.10%), Query Frame = 1
Query:    1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDASMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQFSD 591
            L++L+ R YDV  GQ+L+DG D+RDV+  SL +QIG++ Q+  LF+ ++R NI YG    S +E+ EA   A A +FI ++  GY++++GE G KLSGG+RQRI+IAR LLKNAPIL++DEATSSLD+  E  +Q+ L+ +M+ +T LV+AHRLST+ + DRI+V   G ++E+G+HE LL + G+Y +L   QF +
Sbjct:  393 LVNLIPRFYDVTAGQILIDGHDIRDVSLISLRRQIGIVTQQTILFNDTVRNNIAYGSQGCSEKEIIEAARAANAHDFIVNLPEGYDTVIGELGTKLSGGERQRISIARALLKNAPILILDEATSSLDTEAEMEVQEALERLMKGRTTLVIAHRLSTIRNADRIVVLVKGEIVEEGAHETLLARRGEYYKLHQLQFKE 589          
BLAST of EY728985 vs. ExPASy Swiss-Prot
Match: ABCB6_DICDI (ABC transporter B family member 6 OS=Dictyostelium discoideum GN=abcB6 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.428e-51
Identity = 96/200 (48.00%), Postives = 143/200 (71.50%), Query Frame = 1
Query:    1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDASMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQFSDALD 600
            +  LL R YDV QG++L++G++++DVTQ SL   IG++PQE  LF+ ++  NI +G  +A+ +++ +A  RA    FI+S   G+ ++VGERG++LSGG++QR++IAR LLK+ PIL++DEA+SSLD+ TER IQ  ++E+ + +T LV+AHRLST+ H D ILV   G ++E GSH  LL   G YA LW++Q   A D
Sbjct:  468 IFRLLCRFYDVDQGEILINGENIKDVTQTSLRSIIGVVPQETVLFNDTVAYNIGFGNREANDDQLIDASRRAQILSFIESSPDGFRTVVGERGLRLSGGEKQRVSIARALLKDPPILILDEASSSLDTFTERKIQQAINEVSKGRTTLVIAHRLSTIIHCDEILVLKGGHIVERGSHSYLLDFNGDYAHLWNQQQLSASD 667          
BLAST of EY728985 vs. ExPASy Swiss-Prot
Match: MSBA_CHRVO (Lipid A export ATP-binding/permease protein msbA OS=Chromobacterium violaceum GN=msbA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.258e-51
Identity = 99/197 (50.25%), Postives = 139/197 (70.56%), Query Frame = 1
Query:    1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDASMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQFSD 591
            L SL+ R Y+   G++L+DG  + D+    L   I L+ Q+  LF+ ++  NI YGR DAS EE+ EA   A A EFI+ +  G E+++GE G +LSGGQRQR+AIAR LLKNAP+L++DEATS+LD+ +ER +Q  L+ +M+++T +V+AHRLST+ + DRI+V   GR+ E G H+ LL QGG YARL S QFS+
Sbjct:  384 LASLVPRFYEPSAGRLLLDGVPLADIPLRQLRGHIALVSQQVELFNDTVAANIAYGREDASREEIVEAARAANAMEFIEGLPDGLETVIGENGARLSGGQRQRLAIARALLKNAPLLILDEATSALDTQSERLVQAALENLMKNRTTIVIAHRLSTIENADRIVVMHQGRLAEQGRHQALLEQGGLYARLHSLQFSE 580          
BLAST of EY728985 vs. ExPASy Swiss-Prot
Match: Y2003_STAA8 (Putative multidrug export ATP-binding/permease protein SAOUHSC_02003 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02003 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 97/194 (50.00%), Postives = 140/194 (72.16%), Query Frame = 1
Query:    1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDASMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQ 582
            L++L+ R YDV  GQ+L+DG +++D    SL  QIGL+ Q+  LF  +++ENI  GR  A+ EEV EA   A A +FI ++  GY++ VGERGVKLSGGQ+QR++IAR+ L N PIL++DEATS+LD  +E  IQ+ LD + +D+T L+VAHRLST+ H D+I+V +NG ++E G+H +L+ + G Y  L+S Q
Sbjct:  383 LINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQ 576          
BLAST of EY728985 vs. ExPASy Swiss-Prot
Match: Y1956_STAAR (Putative multidrug export ATP-binding/permease protein SAR1956 OS=Staphylococcus aureus (strain MRSA252) GN=SAR1956 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 97/194 (50.00%), Postives = 140/194 (72.16%), Query Frame = 1
Query:    1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDASMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQ 582
            L++L+ R YDV  GQ+L+DG +++D    SL  QIGL+ Q+  LF  +++ENI  GR  A+ EEV EA   A A +FI ++  GY++ VGERGVKLSGGQ+QR++IAR+ L N PIL++DEATS+LD  +E  IQ+ LD + +D+T L+VAHRLST+ H D+I+V +NG ++E G+H +L+ + G Y  L+S Q
Sbjct:  383 LINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQ 576          
BLAST of EY728985 vs. ExPASy Swiss-Prot
Match: Y1924_STAAC (Putative multidrug export ATP-binding/permease protein SACOL1924 OS=Staphylococcus aureus (strain COL) GN=SACOL1924 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 97/194 (50.00%), Postives = 140/194 (72.16%), Query Frame = 1
Query:    1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDASMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQ 582
            L++L+ R YDV  GQ+L+DG +++D    SL  QIGL+ Q+  LF  +++ENI  GR  A+ EEV EA   A A +FI ++  GY++ VGERGVKLSGGQ+QR++IAR+ L N PIL++DEATS+LD  +E  IQ+ LD + +D+T L+VAHRLST+ H D+I+V +NG ++E G+H +L+ + G Y  L+S Q
Sbjct:  383 LINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQ 576          
BLAST of EY728985 vs. ExPASy Swiss-Prot
Match: Y1866_STAAM (Putative multidrug export ATP-binding/permease protein SAV1866 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV1866 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.209e-50
Identity = 97/194 (50.00%), Postives = 140/194 (72.16%), Query Frame = 1
Query:    1 LLSLLLRLYDVQQGQVLVDGKDVRDVTQHSLHQQIGLIPQEPGLFHRSIRENIHYGRLDASMEEVAEAIHRAGASEFIDSMEHGYESLVGERGVKLSGGQRQRIAIARVLLKNAPILVMDEATSSLDSITERFIQDKLDEIMEDKTVLVVAHRLSTVAHLDRILVFDNGRVIEDGSHEQLLRQGGQYARLWSRQ 582
            L++L+ R YDV  GQ+L+DG +++D    SL  QIGL+ Q+  LF  +++ENI  GR  A+ EEV EA   A A +FI ++  GY++ VGERGVKLSGGQ+QR++IAR+ L N PIL++DEATS+LD  +E  IQ+ LD + +D+T L+VAHRLST+ H D+I+V +NG ++E G+H +L+ + G Y  L+S Q
Sbjct:  383 LINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQ 576          
The following BLAST results are available for this feature:
BLAST of EY728985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1051_HAEIN1.021e-5753.85Uncharacterized ABC transporter ATP-binding protei... [more]
YGAD_BACSU1.168e-5352.58Putative multidrug export ATP-binding/permease pro... [more]
MSBA_METFK1.292e-5253.57Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_SYNAS1.094e-5149.75Lipid A export ATP-binding/permease protein msbA O... [more]
ABCB6_DICDI5.428e-5148.00ABC transporter B family member 6 OS=Dictyostelium... [more]
MSBA_CHRVO9.258e-5150.25Lipid A export ATP-binding/permease protein msbA O... [more]
Y2003_STAA81.209e-5050.00Putative multidrug export ATP-binding/permease pro... [more]
Y1956_STAAR1.209e-5050.00Putative multidrug export ATP-binding/permease pro... [more]
Y1924_STAAC1.209e-5050.00Putative multidrug export ATP-binding/permease pro... [more]
Y1866_STAAM1.209e-5050.00Putative multidrug export ATP-binding/permease pro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-B04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728985 ID=EY728985; Name=EY728985; organism=Citrus sinensis; type=EST; length=876bp
CTGCTGAGCCTGCTGCTACGTCTTTACGACGTGCAGCAAGGCCAGGTGCT
GGTGGACGGCAAGGACGTACGCGACGTCACCCAGCATTCGCTGCACCAGC
AGATCGGCCTGATTCCCCAGGAGCCGGGCTTGTTCCACCGCAGCATTCGC
GAAAACATCCATTACGGCCGCCTGGATGCCTCGATGGAAGAGGTCGCCGA
GGCGATCCACCGCGCCGGCGCCAGTGAGTTTATCGACAGCATGGAACACG
GCTACGAATCGTTGGTGGGCGAGCGTGGGGTCAAGTTGTCCGGCGGCCAG
CGTCAGCGCATTGCGATTGCCCGGGTGTTGCTGAAGAACGCGCCGATCCT
GGTGATGGACGAAGCCACTTCCAGTCTGGACTCGATCACCGAGCGCTTTA
TCCAGGACAAGCTCGACGAAATCATGGAGGACAAGACCGTGCTGGTGGTG
GCGCATCGGCTGTCCACCGTGGCCCATCTGGACCGCATCCTGGTGTTCGA
CAATGGCCGGGTGATCGAGGACGGCAGCCACGAACAGTTGCTGCGCCAGG
GCGGGCAATATGCGCGGTTGTGGAGTCGCCAGTTCAGTGATGCGCTGGAT
GAAGTCGCGCTGTGATCAGGCGGCGTACCGGGTACGCCGCGCAGTGCAGG
TCAGATCGACAGGTGCAGCACTCGCTCGTCTTTGGCGCCAGCCAGCGGGC
GGCGCTTGTTGACTTCANCTCACCAGNGTGATCAGCAAGTGCGGGTCCGT
TGCGGTCATTCCCTCACTCGGCGGTTCCCCTGCTGTGAGGGACTGCCGTA
GCGGGGGCAGACGCGCCCGCCGGTCGGGAGTTCGANGTCTCATCCCCCCA
GGCGGTGGGGTGGGGGTTTTTTTTCT
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