EY728979

Overview
NameEY728979
Unique NameEY728979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728979 vs. ExPASy Swiss-Prot
Match: YGCS_ECOLI (Inner membrane metabolite transport protein ygcS OS=Escherichia coli (strain K12) GN=ygcS PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 2.700e-45
Identity = 84/143 (58.74%), Postives = 111/143 (77.62%), Query Frame = -1
Query:    2 MSTSSIKIEDLPIVAYHLKIAGVTFGAHFTDGYILGLIGIAFTLLSPQMHMDAFWQGLIGASALIGLFMGSLFFGWISDTLGRQNIFLVSFVLITVASVMQFYAETAMGLFLCRVLIGIGLGGDFSVGHAMLAEFSPKKHRGV 430
            M+TS ++++DLP+  +H +IA +TFGAH TDGY+LG+IG A   L+P M +  F  G+IG SAL+GLF+GSL  GWISD +GRQ IF  SF+LIT+AS +QF+A T   L   R+LIGIGLGGD+SVGH +LAEFSP++HRG+
Sbjct:    1 MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGI 143          
BLAST of EY728979 vs. ExPASy Swiss-Prot
Match: YAAU_ECOLI (Putative metabolite transport protein yaaU OS=Escherichia coli (strain K12) GN=yaaU PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.853e-24
Identity = 55/137 (40.15%), Postives = 83/137 (60.58%), Query Frame = -1
Query:    8 SIKIEDLPIVAYHLKIAGVTFGAHFTDGYILGLIGIAFTLLSPQMHMDAFWQGLIGASALIGLFMGSLFFGWISDTLGRQNIFLVSFVLITVASVMQFYAETAMGLFLCRVLIGIGLGGDFSVGHAMLAEFSPKKHR 418
            S   +DL   + H +I     G  F DGY+L +IG+A   L+P + +DA W GL+GA  L GLF+G+  FG+ISD +GR+ +FL+  + I V SV   +  + + L + RVLIGI +G D+ +  +M+ EFS  + R
Sbjct:    4 SRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQR 140          
BLAST of EY728979 vs. ExPASy Swiss-Prot
Match: BENK_ACIAD (Benzoate transport protein OS=Acinetobacter sp. (strain ADP1) GN=benK PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.725e-13
Identity = 42/139 (30.22%), Postives = 75/139 (53.96%), Query Frame = -1
Query:    8 IEDLPIVAYHLKIAGVTFGAHFTDGYILGLIGIAFTLLSPQMHMDAFWQGLIGASALIGLFMGSLFFGWISDTL-----GRQNIFLVSFVLITVASVMQFYAETAMGLFLCRVLIGIGLGGDFSVGHAMLAEFSPKKHR 409
            I+D  +  +H ++  ++      DGY L + G+A  LL  +  +D    G IG+ AL G+  G+L FG I+D L      R+ +  V  +L ++ +V+  ++ET     + R L G+G+GG      A+++E++PKK +
Sbjct:   11 IDDSKLTPFHWRVIILSTLIIIFDGYDLVIYGVALPLLMKEWAIDPVTAGFIGSIALFGMMFGALIFGTIADKLEHLGVSRKKVIAVCIILFSLCTVLCGFSETTTQFSIFRFLAGVGIGGVMPNVIALVSEYAPKKFK 149          
BLAST of EY728979 vs. ExPASy Swiss-Prot
Match: PHT13_ORYSJ (Probable inorganic phosphate transporter 1-3 OS=Oryza sativa subsp. japonica GN=PHT1-3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.693e-11
Identity = 48/146 (32.88%), Postives = 72/146 (49.32%), Query Frame = -1
Query:    5 YH---LKIAGVTFGAHFTDGYILGLIGIAFTLLSPQMHMDAFWQG----------LIGASALIGLFMGSLFFGWISDTLGRQNIFLVSFVLITVASVMQ--FYAETAMGLF--LC--RVLIGIGLGGDFSVGHAMLAEFSPKKHRG 385
            YH   + IAG+ F   FTD Y L  I +   LL    + D                +   AL G   G LFFGW+ D LGR++++  + VL+ V SV     +  TA G+   LC  R  +G G+GGD+ +   +++E++ K+ RG
Sbjct:   20 YHFMAIVIAGMGF---FTDAYDLFCISLVSKLLGRIYYTDLAGDNPGSLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKSVYGFTLVLMVVCSVASGLSFGRTAKGVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRG 162          
The following BLAST results are available for this feature:
BLAST of EY728979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
YGCS_ECOLI2.700e-4558.74Inner membrane metabolite transport protein ygcS O... [more]
YAAU_ECOLI5.853e-2440.15Putative metabolite transport protein yaaU OS=Esch... [more]
BENK_ACIAD2.725e-1330.22Benzoate transport protein OS=Acinetobacter sp. (s... [more]
PHT13_ORYSJ9.693e-1132.88Probable inorganic phosphate transporter 1-3 OS=Or... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-A07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728979 ID=EY728979; Name=EY728979; organism=Citrus sinensis; type=EST; length=652bp
TCACGCCACGGTGTTTTTTGGGCGAGAACTCGGCGAGCATCGCGTGACCG
ACGCTGAAATCGCCGCCCAGGCCGATGCCGATCAACACGCGGCAGAGGAA
CAGCCCCATGGCAGTTTCGGCATAGAACTGCATCACCGAGGCAACGGTGA
TCAGGACGAAGCTGACCAGGAAGATGTTCTGCCGGCCGAGGGTGTCGGAG
ATCCAGCCAAAAAACAGGCTGCCCATAAACAGCCCGATCAGGGCCGAAGC
GCCGATCAAGCCTTGCCAGAAGGCGTCCATGTGCATCTGTGGGCTGAGCA
ATGTGAAGGCAATGCCGATCAGGCCGAGGATATATCCGTCGGTGAAGTGC
GCGCCGAAGGTCACGCCGGCGATTTTAAGGTGGTAAGCGACGATGGGCAA
GTCTTCGATCTTGATGGATGAGGTGGACATGGTGTTCTCTATAGGTGGGG
TTCTGTAGGCACTATATCAGAGCGGTCGATGGTCATGTGTGTGCCTTTGG
TGCGGAACAGCATGGCTATCAAAGGAATTGGCCCTCTCACCCATTGGCTA
AAGCCCAGCCTTTCNAATTATAAGGGAGAGTCAGGACCTCTGGCGGAAGT
CATCAAGCACCTGGAACTCAAGCTGAATCTGCGGCGGTAGGTATAACATC
GT
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