EY728978

Overview
NameEY728978
Unique NameEY728978
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: HMUS_YERPE (Hemin transport protein hmuS OS=Yersinia pestis GN=hmuS PE=4 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 9.799e-27
Identity = 66/174 (37.93%), Postives = 95/174 (54.60%), Query Frame = -1
Query:  353 PPSDAPGVEDAAQRRQAWFGIQNTPQVLPAAAQVKGWRLPALEAAGEDLAQTVPVESVERMLESSAGSGLSIMCFVGNRGMIQIHTGPVEQLRRTGPWYNVLDPKFNLHLDTTAIASAWVVNKPTSDGWVTSLELYSSSGDLIAQFFGERKPGKPELRGWRELMLGLCRVPLAA 874
            P +  P  +DA    + W  + +  Q      +    R  A  A G+DLA  V   S+ ++L  +      IM FVGNRG +QI TG +E++     W NV + +F LHL  TAIA +W+  KPT DG+VTSLEL+++ G  +AQ +G+R  G+PE   WRE +  L    +AA
Sbjct:  173 PEAVEPTADDATVDSE-WRAMTDVHQFFQLLKRNNLTRQQAFRAVGDDLAYQVDNNSLTQLLHIAQQDQNEIMIFVGNRGCVQIFTGLIEKVTPHNEWINVFNQRFTLHLIETAIAESWITRKPTKDGFVTSLELFAADGTQLAQLYGQRTEGQPEQNQWREQIARLINKDIAA 345          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: HEMS_YEREN (Hemin transport protein hemS OS=Yersinia enterocolitica GN=hemS PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.414e-25
Identity = 66/177 (37.29%), Postives = 93/177 (52.54%), Query Frame = -1
Query:  353 PSDAPGVEDAAQRRQA----WFGIQNTPQVLPAAAQVKGWRLPALEAAGEDLAQTVPVESVERMLESSAGSGLSIMCFVGNRGMIQIHTGPVEQLRRTGPWYNVLDPKFNLHLDTTAIASAWVVNKPTSDGWVTSLELYSSSGDLIAQFFGERKPGKPELRGWRELMLGLCRVPLAA 871
            P  AP V +     +A    W  + +  Q      +    R  A  A G DLA  V   S+ ++L  +      IM FVGNRG +QI TG +E++     W NV + +F LHL  T IA +W+  KPT DG+VTSLEL+++ G  IAQ +G+R  G+PE   WR+ +  L    +AA
Sbjct:  169 PLSAPEVTEPTATDEAVDAEWRAMTDVHQFFQLLKRNNLTRQQAFRAVGNDLAYQVDNSSLTQLLNIAQQEQNEIMIFVGNRGCVQIFTGMIEKVTPHQDWINVFNQRFTLHLIETTIAESWITRKPTKDGFVTSLELFAADGTQIAQLYGQRTEGQPEQTQWRDEIARLNNKDIAA 345          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: HMUT_YERPE (Hemin-binding periplasmic protein hmuT OS=Yersinia pestis GN=hmuT PE=4 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.367e-18
Identity = 48/104 (46.15%), Postives = 64/104 (61.54%), Query Frame = -2
Query:   13 WMLVACAQAAP-----PARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKVVSVP 309
            ++L  CA   P       R+VT+GG VTEI Y LG GD +V  D +S  P+AA +LP VGY R +  EG+LA+KP ++L SE A P   L ++   GV VV+VP
Sbjct:   10 FILSLCAPLLPLNTLAAERIVTIGGDVTEIAYALGAGDEIVARDSTSQQPQAAQKLPDVGYMRTLNAEGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 113          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_VIBVY (Vitamin B12-binding protein OS=Vibrio vulnificus (strain YJ016) GN=btuF PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.623e-13
Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = -2
Query:   25 QAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 288
            QAAP  RV++L    TEI Y  G GD+L+   + S YPEAA +L +V  Y+ + +E ++ LKPDL+LA     P + L++L + G K+
Sbjct:   17 QAAPIERVISLAPHATEIAYAAGLGDKLIAVSEMSDYPEAAKKLEKVSNYKGINLEKIITLKPDLILAWPAGNPAKELEKLEQFGFKI 104          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_VIBVU (Vitamin B12-binding protein OS=Vibrio vulnificus GN=btuF PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.768e-13
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = -2
Query:   25 QAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 288
            QAAP  RV++L    TEI Y  G GD+L+   + S YPEAA +L +V  Y+ + +E ++ LKPDL++A     P + L++L + G K+
Sbjct:   17 QAAPIERVISLAPHATEIAYAAGLGDKLIAVSEMSDYPEAAKKLEKVSNYKGINLEKIITLKPDLIIAWPAGNPAKELEKLEQFGFKI 104          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_PHOPR (Vitamin B12-binding protein OS=Photobacterium profundum GN=btuF PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = -2
Query:   25 PPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 279
            P  RV++L    TE+ Y  G GD L+     S YPEAA +L RV  YR V +E ++AL+PDL+LA +   PP  + +L ++G+ V
Sbjct:   20 PALRVISLSPHTTELAYAAGLGDALIAASDYSDYPEAAQKLERVANYRGVKLERIVALQPDLILAWKGGNPPREMAKLEQLGLNV 104          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_YERPY (Vitamin B12-binding protein OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=btuF PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L  +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_YERPS (Vitamin B12-binding protein OS=Yersinia pseudotuberculosis GN=btuF PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L  +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_YERPP (Vitamin B12-binding protein OS=Yersinia pestis (strain Pestoides F) GN=btuF PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L  +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_YERPN (Vitamin B12-binding protein OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=btuF PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L  +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
The following BLAST results are available for this feature:
BLAST of EY728978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
HMUS_YERPE9.799e-2737.93Hemin transport protein hmuS OS=Yersinia pestis GN... [more]
HEMS_YEREN2.414e-2537.29Hemin transport protein hemS OS=Yersinia enterocol... [more]
HMUT_YERPE6.367e-1846.15Hemin-binding periplasmic protein hmuT OS=Yersinia... [more]
BTUF_VIBVY1.623e-1342.05Vitamin B12-binding protein OS=Vibrio vulnificus (... [more]
BTUF_VIBVU2.768e-1340.91Vitamin B12-binding protein OS=Vibrio vulnificus G... [more]
BTUF_PHOPR1.052e-1242.35Vitamin B12-binding protein OS=Photobacterium prof... [more]
BTUF_YERPY1.984e-1141.49Vitamin B12-binding protein OS=Yersinia pseudotube... [more]
BTUF_YERPS1.984e-1141.49Vitamin B12-binding protein OS=Yersinia pseudotube... [more]
BTUF_YERPP1.984e-1141.49Vitamin B12-binding protein OS=Yersinia pestis (st... [more]
BTUF_YERPN1.984e-1141.49Vitamin B12-binding protein OS=Yersinia pestis bv.... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728978 ID=EY728978; Name=EY728978; organism=Citrus sinensis; type=EST; length=904bp
CGACGGCGCGTCCGGCACGCTCACGACCTTCACGCCGACTTCGCCCAGGC
GCTTGAGCGCCTCGGGCGGGCCGGCCTGCTCGGACGCCAGCACCAGGTCG
GGCTTGAGCGCCAGCACGCCCTCCACCGGCACCGCGCGGTAATAGCCGAC
GCGCGGCAGCCTGGTCGCGGCTTCCGGGTACAGGCTGGACTGGTCGTCGC
CCACCAGCCTGTCGCCCTGCCCCAGGCCGTACACGATCTCCGTCACGCTA
CCGCCCAGGGTCACCACGCGCGCAGGCGGCGCCGCCTGCGCGCAAGCCAC
CAGCATCCATCCCGCCGCCATCGCCAGCCATTTCTTCATTGCTTCATCCT
CACGCGGCCAACGGCACGCGGCACAGACCCAACATCAATTCGCGCCAGCC
CCGCAGTTCCGGCTTGCCCGGCTTGCGCTCGCCAAAGAACTGCGCGATCA
GGTCGCCGCTGGAAGAATACAGCTCCAGCGACGTCACCCAGCCATCGCTG
GTGGGCTTGTTGACCACCCACGCCGACGCGATGGCGGTGGTGTCCAGATG
CAGGTTGAACTTCGGGTCCAGCACGTTATACCAGGGACCGGTGCGGCGCA
GCTGCTCCACGGGTCCGGTATGGATCTGGATCATGCCCCGGTTGCCGACG
AAGCACATGATCGACAGGCCGCTGCCCGCGGACGACTCCAGCATGCGCTC
GACCGATTCCACCGGCACGGTCTGGGCCAGGTCCTCGCCGGCCGCCTCGA
GCGCCGGCAGGCGCCACCCTTTAACTTGCGCAGCAGCGGGAAGGACTTGT
GGCGTGTTCTGAATGCCGAACCAGGCCTGGCGCCGCTGCGCCGCGTCCTC
GACCCCCGGCGCGTCGGAGGGGGGCCATATGTCGGCGTCTTGGGCCTGAG
GACT
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