EY728977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728977 vs. ExPASy Swiss-Prot
Match: L14AA_XENLA (Protein LSM14 homolog A-A OS=Xenopus laevis GN=lsm14a-A PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21 Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 137 ISLTSKSEIRYEGVLFNINTEESSIGLRNVRSFGTEGRRKDGPQVPPSDKIYEYILFRGSDIKDLQVKSSPPIQTTTSIHNDPAIIQSHYSQAAIASTTLPSGTG 451 ISL SK+EIRYEG+L+ I+TE S++ L VRSFGTE R D P +PP D+I+EYI+FRGSDIKDL V P Q S+ DPAI+QS ++ +S S G Sbjct: 12 ISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDEIFEYIIFRGSDIKDLTVCEPPKPQ--CSLPQDPAIVQSSLGSSSASSFQSVSSYG 113
BLAST of EY728977 vs. ExPASy Swiss-Prot
Match: LS14A_XENTR (Protein LSM14 homolog A OS=Xenopus tropicalis GN=lsm14a PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21 Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 137 ISLTSKSEIRYEGVLFNINTEESSIGLRNVRSFGTEGRRKDGPQVPPSDKIYEYILFRGSDIKDLQVKSSPPIQTTTSIHNDPAIIQSHYSQAAIASTTLPSGTG 451 ISL SK+EIRYEG+L+ I+TE S++ L VRSFGTE R D P +PP D+++EYI+FRGSDIKDL V P Q S+ DPAI+QS ++ +S S G Sbjct: 12 ISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDEVFEYIIFRGSDIKDLTVCEPPKPQ--CSLPQDPAIVQSSLGSSSASSFQSVSSYG 113
BLAST of EY728977 vs. ExPASy Swiss-Prot
Match: L14AB_XENLA (Protein LSM14 homolog A-B OS=Xenopus laevis GN=lsm14a-B PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21 Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 137 ISLTSKSEIRYEGVLFNINTEESSIGLRNVRSFGTEGRRKDGPQVPPSDKIYEYILFRGSDIKDLQVKSSPPIQTTTSIHNDPAIIQSHYSQAAIASTTLPSGTG 451 ISL SK+EIRYEG+L+ I+TE S++ L VRSFGTE R D P +PP D+++EYI+FRGSDIKDL V P Q S+ DPAI+QS ++ +S S G Sbjct: 12 ISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDEVFEYIIFRGSDIKDLTVCEPPKPQ--CSLPQDPAIVQSSLGSSSASSFQSVSSYG 113
BLAST of EY728977 vs. ExPASy Swiss-Prot
Match: SUM2_SCHPO (Protein sum2 OS=Schizosaccharomyces pombe GN=sum2 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21 Identity = 60/149 (40.27%), Postives = 88/149 (59.06%), Query Frame = 2 Query: 137 ISLTSKSEIRYEGVLFNINTEESSIGLRNVRSFGTEGRRKDGPQ-VPPSDKIYEYILFRGSDIKDLQVK------SSPPIQTTTSIHNDPAII-----QSHYSQAAIASTTLPSGTGSLPDPTSQTSQLGLSRPPFQGNPPLYXPXGSL 547 ISL SKS+IRY G+L +IN+++S++ L++VR GTEGR++D Q +PPSD +++YI+FRGSD+KDL+++ S+PP+Q NDPAII Q +++QA A P P Q G + P + P G L Sbjct: 9 ISLISKSDIRYVGILQDINSQDSTLALKHVRWCGTEGRKQDPSQEIPPSDNVFDYIVFRGSDVKDLRIEEPATTPSAPPVQPP----NDPAIIGSNSGQYNWNQAQTAQPPQPVQPNPYGAPYQQAPPAGAPYYMYPNAPAQFVPPGGL 153
BLAST of EY728977 vs. ExPASy Swiss-Prot
Match: LS14A_PONAB (Protein LSM14 homolog A OS=Pongo abelii GN=LSM14A PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.249e-20 Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 2 Query: 137 ISLTSKSEIRYEGVLFNINTEESSIGLRNVRSFGTEGRRKDGPQVPPSDKIYEYILFRGSDIKDLQVKSSPPIQTTTSIHNDPAIIQS 400 ISL SK+EIRYEG+L+ I+TE S++ L VRSFGTE R D P +PP D+++EYI+FRGSDIKDL V P Q S+ DPAI+QS Sbjct: 12 ISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDEVFEYIIFRGSDIKDLTVCEPPKPQ--CSLPQDPAIVQS 96
BLAST of EY728977 vs. ExPASy Swiss-Prot
Match: LS14A_MOUSE (Protein LSM14 homolog A OS=Mus musculus GN=Lsm14a PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.249e-20 Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 2 Query: 137 ISLTSKSEIRYEGVLFNINTEESSIGLRNVRSFGTEGRRKDGPQVPPSDKIYEYILFRGSDIKDLQVKSSPPIQTTTSIHNDPAIIQS 400 ISL SK+EIRYEG+L+ I+TE S++ L VRSFGTE R D P +PP D+++EYI+FRGSDIKDL V P Q S+ DPAI+QS Sbjct: 12 ISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDEVFEYIIFRGSDIKDLTVCEPPKPQ--CSLPQDPAIVQS 96
BLAST of EY728977 vs. ExPASy Swiss-Prot
Match: LS14A_HUMAN (Protein LSM14 homolog A OS=Homo sapiens GN=LSM14A PE=1 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 2.249e-20 Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 2 Query: 137 ISLTSKSEIRYEGVLFNINTEESSIGLRNVRSFGTEGRRKDGPQVPPSDKIYEYILFRGSDIKDLQVKSSPPIQTTTSIHNDPAIIQS 400 ISL SK+EIRYEG+L+ I+TE S++ L VRSFGTE R D P +PP D+++EYI+FRGSDIKDL V P Q S+ DPAI+QS Sbjct: 12 ISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDEVFEYIIFRGSDIKDLTVCEPPKPQ--CSLPQDPAIVQS 96
BLAST of EY728977 vs. ExPASy Swiss-Prot
Match: LS14A_BOVIN (Protein LSM14 homolog A OS=Bos taurus GN=LSM14A PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.249e-20 Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 2 Query: 137 ISLTSKSEIRYEGVLFNINTEESSIGLRNVRSFGTEGRRKDGPQVPPSDKIYEYILFRGSDIKDLQVKSSPPIQTTTSIHNDPAIIQS 400 ISL SK+EIRYEG+L+ I+TE S++ L VRSFGTE R D P +PP D+++EYI+FRGSDIKDL V P Q S+ DPAI+QS Sbjct: 12 ISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-IPPRDEVFEYIIFRGSDIKDLTVCEPPKPQ--CSLPQDPAIVQS 96
BLAST of EY728977 vs. ExPASy Swiss-Prot
Match: L14BB_XENLA (Protein LSM14 homolog B-B OS=Xenopus laevis GN=lsm14b-B PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.249e-20 Identity = 51/101 (50.50%), Postives = 70/101 (69.31%), Query Frame = 2 Query: 137 ISLTSKSEIRYEGVLFNINTEESSIGLRNVRSFGTEGRRKDGPQVPPSDKIYEYILFRGSDIKDLQVKSSPPIQTTTSIHNDPAIIQSHYSQAAIASTTLP 439 ISL SK++IRYEG+L+ I+TE S++ L VRSFGTE R D P PP +++YEYI+FRGSDIKD+ V P + + ++ DPAI+QS AA ++P Sbjct: 12 ISLISKAQIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-APPREEVYEYIIFRGSDIKDITVCEPP--KASHALSQDPAIVQSSLGSAASYQPSVP 109
BLAST of EY728977 vs. ExPASy Swiss-Prot
Match: L14BA_XENLA (Protein LSM14 homolog B-A OS=Xenopus laevis GN=lsm14b-A PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.837e-20 Identity = 65/151 (43.05%), Postives = 86/151 (56.95%), Query Frame = 2 Query: 137 ISLTSKSEIRYEGVLFNINTEESSIGLRNVRSFGTEGRRKDGPQVPPSDKIYEYILFRGSDIKDLQVKSSPPIQTTTSIHNDPAIIQSHYSQAAIAS--TTLP-SGTGSLP--DPTSQTSQLGLSRPPFQGNPPLYXPXGSLGAWGSSPMP 574 ISL SK++IRYEG+L+ I+TE S++ L VRSFGTE R D P PP +++YEYI+FRGSDIKD+ V P + + ++ DPAI+QS A AS ++P S +P + TS L G L P S GA S P Sbjct: 12 ISLISKAQIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRP-APPREEVYEYIIFRGSDIKDITVCEPP--KASHALPQDPAIVQSSLGSAPAASYQPSVPYSPFRGMPTYSQLAATSLLSQQYAASLGLEKLGSPTASAGASSSCSSP 159 The following BLAST results are available for this feature:
BLAST of EY728977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728977 ID=EY728977; Name=EY728977; organism=Citrus sinensis; type=EST; length=884bpback to top |