EY728963

Overview
NameEY728963
Unique NameEY728963
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728963 vs. ExPASy Swiss-Prot
Match: SLSG6_BRAOL (S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.368e-31
Identity = 75/154 (48.70%), Postives = 104/154 (67.53%), Query Frame = 2
Query:  131 LNTLTPTTLIR--DGETLISPSQKFELSFFSPGKSQNRYVGIW*PQIPD-TVVWVANRNNPIVDKNGVLTVNHRGNLVLLNQSNGTIWSSNVSR--EIKNPVAQLLYNGNLVIRDNSGSNSTESYLWESFYYPTDTMFQGMKLGWDLKTGLERY 577
            +NTL+ T  +R     TL+SP   FEL FF    S   Y+GIW  ++ D T VWVANR+NP+ +  G L ++   NLVLL  +N ++WS+N++R  E    VA+LL NGN V+RD+S ++++E YLW+SF YPTDT+   MKLG+DLKTGL R+
Sbjct:   32 INTLSSTESLRISSNRTLVSPGNNFELGFFRTNSSSRWYLGIWYKKLLDRTYVWVANRDNPLSNAIGTLKISGN-NLVLLGHTNKSVWSTNLTRGNERLPVVAELLSNGNFVMRDSSNNDASE-YLWQSFDYPTDTLLPEMKLGYDLKTGLNRF 183          
BLAST of EY728963 vs. ExPASy Swiss-Prot
Match: SLSG3_BRAOL (S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.786e-31
Identity = 77/154 (50.00%), Postives = 100/154 (64.94%), Query Frame = 2
Query:  131 LNTLTPTT--LIRDGETLISPSQKFELSFFSPGKSQNRYVGIW*PQIP-DTVVWVANRNNPIVDKNGVLTVNHRGNLVLLNQSNGTIWSSNVSR--EIKNPVAQLLYNGNLVIRDNSGSNSTESYLWESFYYPTDTMFQGMKLGWDLKTGLERY 577
            +NTL+ T    I    TL+SP   FEL FF    S   Y+GIW  + P  T VWVANR+NP+ +  G L ++   NLVLL+ SN ++WS+NV+R  E    VA+LL NGN V+RD S SN+   +LW+SF YPTDT+   MKLG+DLKTGL R+
Sbjct:   32 INTLSSTESLTISSNRTLVSPGNVFELGFFKTTSSSRWYLGIWYKKFPYRTYVWVANRDNPLSNDIGTLKISGN-NLVLLDHSNKSVWSTNVTRGNERSPVVAELLDNGNFVMRD-SNSNNASQFLWQSFDYPTDTLLPEMKLGYDLKTGLNRF 183          
BLAST of EY728963 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28
Identity = 71/154 (46.10%), Postives = 103/154 (66.88%), Query Frame = 2
Query:  131 LNTLTPTT--LIRDGETLISPSQKFELSFFSPGKSQNRYVGIW*PQIPD-TVVWVANRNNPIVDKNGVLTVNHRGNLVLLNQSNGTIWSSNVSR--EIKNPVAQLLYNGNLVIRDNSGSNSTESYLWESFYYPTDTMFQGMKLGWDLKTGLERY 577
            +NTL+ T    I   +TL+SP   FE+ FF    +   Y+G+W  ++ D T VWVANR+NP+ +  G L ++   NLVLL+ SN  +W +N++R  E    VA+LL NGN V+RD+S ++++E YLW+SF YPTDT+   MKLG++LKTGL R+
Sbjct:   33 INTLSSTESLTISSNKTLVSPGSIFEVGFFRT--NSRWYLGMWYKKVSDRTYVWVANRDNPLSNAIGTLKISGN-NLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASE-YLWQSFDYPTDTLLPEMKLGYNLKTGLNRF 182          
BLAST of EY728963 vs. ExPASy Swiss-Prot
Match: SLSG2_BRAOA (S-locus-specific glycoprotein BS29-2 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.174e-28
Identity = 70/154 (45.45%), Postives = 98/154 (63.64%), Query Frame = 2
Query:  131 LNTLTP--TTLIRDGETLISPSQKFELSFFSPGKSQNRYVGIW*PQIPD-TVVWVANRNNPIVDKNGVLTVNHRGNLVLLNQSNGTIWSSNVSR--EIKNPVAQLLYNGNLVIRDNSGSNSTESYLWESFYYPTDTMFQGMKLGWDLKTGLERY 577
            +NTL+   +  I +  TL+SP    EL FF    S   Y+G+W  ++ + T VWVANR+NP+    G L +++  NLVLL+ SN ++WS+N +R  E    VA+LL NGN V+RD S  N    +LW+SF YPTDT+   MKLG+DL+TGL R+
Sbjct:   31 INTLSSIESLKISNSRTLVSPGNVLELGFFRTPSSSRWYLGMWYKKLSERTYVWVANRDNPLSCSIGTLKISNM-NLVLLDHSNKSLWSTNHTRGNERSPVVAELLANGNFVLRD-SNKNDRSGFLWQSFDYPTDTLLPEMKLGYDLRTGLNRF 182          
BLAST of EY728963 vs. ExPASy Swiss-Prot
Match: SLSG4_BRAOL (S-locus-specific glycoprotein S14 (Fragment) OS=Brassica oleracea GN=SLSG PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.669e-27
Identity = 81/215 (37.67%), Postives = 111/215 (51.63%), Query Frame = 2
Query:  131 LNTLTP--TTLIRDGETLISPSQKFELSFFSPGKSQNRYVGIW*PQIPD-TVVWVANRNNPIVDKNGVLTVNHRGNLVLLNQSNGTIWSSNVSR--EIKNPVAQLLYNGNLVIRDNSGSNSTESYLWESFYYPTDTMFQGMKLGWDLKTGLERY---------QHHGKVLMILPPETYFPT*HSCVTSTMFYNGSGQYIC--TGPGNGVAFGSPP 727
            +NTL+   +  I    TL+SP   FEL FF    S   Y+GIW  ++ D T VWVANR+NP+    G L ++   N   L+ SN ++WS+N++R  E    VA +L NGN V+RD S +N    +LW+SF +PTDT+   MKL +DLKTGL R+            G     L P               FY  SG ++   +GP NG+ F   P
Sbjct:   29 INTLSSIESLTISSNRTLVSPGNVFELGFFRTNSSSRWYLGIWYKKVSDRTYVWVANRDNPLSSSIGTLKISGN-NPCHLDHSNKSVWSTNLTRGNERSPVVADVLANGNFVMRD-SNNNDASGFLWQSFDFPTDTLLPEMKLSYDLKTGLNRFLTSRRSSDDPSSGDFSYKLEPRRL----------PEFYLSSGVFLLYRSGPWNGIRFSGLP 231          
BLAST of EY728963 vs. ExPASy Swiss-Prot
Match: SLSG0_BRAOA (S-locus-specific glycoprotein OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.585e-22
Identity = 80/220 (36.36%), Postives = 107/220 (48.64%), Query Frame = 2
Query:  134 NTLTPTTL--IRDGETLISPSQKFELSFF------SPGKSQNRYVGIW*PQIPD--TVVWVANRNNPIVDKNGVLTVNHRGNLVLLNQSNGTIWSSNVSREIKNPV-AQLLYNGNLVIRDNSGSNSTESYLWESFYYPTDTMFQGMKLGWDLKTGLERYQ-----------HHGKVLMILPPETYFPT*HSCVTSTMFYNGSGQYICTGPGNGVAFGSPP 727
            NTL+P     I   +TL+SP   FEL FF      SP  +   Y+GIW        T VWVANR+N + +  G L ++H  +LVLL+ SN  +WS+N +     PV A+LL NGN V+RD S +N  + ++W+SF YP DT+   MKLG +L  G E  +             G    IL  E +    +        Y        TGP NGV F   P
Sbjct:   30 NTLSPNEALTISSNKTLVSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLKISH-ASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRD-SKTNDLDRFMWQSFDYPVDTLLPEMKLGRNL-IGSENEKILTSWKSPTDPSSGDFSFILETEGFLHEFYLLKNEFKVYR-------TGPWNGVRFNGIP 239          
BLAST of EY728963 vs. ExPASy Swiss-Prot
Match: SLSG1_BRAOA (S-locus-specific glycoprotein BS29-1 OS=Brassica oleracea var. alboglabra GN=SLSG PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.283e-21
Identity = 78/219 (35.62%), Postives = 108/219 (49.32%), Query Frame = 2
Query:  134 NTLTPTTL--IRDGETLISPSQKFELSFF------SPGKSQNRYVGIW*PQIPD--TVVWVANRNNPIVDKNGVLTVNHRGNLVLLNQSNGTIWSSNVSREIKNPV-AQLLYNGNLVIRDNSGSNSTESYLWESFYYPTDTMFQGMKLGWDLK-TGLERY---------QHHGKVLMILPPETYFPT*HSCVTSTMFYNGSGQYICTGPGNGVAFGSPP 727
            NTL+P     I   +TL+SP   FEL FF      SP  +   Y+GIW        T VWVANR+N + +  G L ++H  +LVLL+ SN  +WS+N +     PV A+LL NGN V+RD S + + + ++W+SF YP DT+   MKLG +   +G E+             G    IL  E +       +      N   +   TGP NGV F   P
Sbjct:   30 NTLSPNEALTISSNKTLVSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLKISH-ASLVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRD-SKTTALDRFMWQSFDYPVDTLLPEMKLGRNRNGSGNEKILTSWKSPTDPSSGDYSFILETEGF-------LHEFYLLNNEFKVYRTGPWNGVRFNGIP 239          
The following BLAST results are available for this feature:
BLAST of EY728963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SLSG6_BRAOL1.368e-3148.70S-locus-specific glycoprotein S6 OS=Brassica olera... [more]
SLSG3_BRAOL1.786e-3150.00S-locus-specific glycoprotein S13 OS=Brassica oler... [more]
SRK6_BRAOE7.024e-2846.10Putative serine/threonine-protein kinase receptor ... [more]
SLSG2_BRAOA9.174e-2845.45S-locus-specific glycoprotein BS29-2 OS=Brassica o... [more]
SLSG4_BRAOL2.669e-2737.67S-locus-specific glycoprotein S14 (Fragment) OS=Br... [more]
SLSG0_BRAOA2.585e-2236.36S-locus-specific glycoprotein OS=Brassica oleracea... [more]
SLSG1_BRAOA1.283e-2135.62S-locus-specific glycoprotein BS29-1 OS=Brassica o... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728963 ID=EY728963; Name=EY728963; organism=Citrus sinensis; type=EST; length=786bp
CCACGCGTCCGGAATCTCAAAAGATGTAGACATATTTTTCTCTTTTCAGT
TATATCAATGGAGATTCTTCCATGCTTCAACATCTTTAGTTCTTTGATTT
TCTACTGGGTCATTAAGTTTTCGTTAGCAGCTGAATACACTAACTCCAAC
AACACTCATCCGTGATGGTGAAACGTTAATTTCACCGTCTCAAAAGTTTG
AACTAAGCTTCTTCTCTCCTGGAAAATCACAGAACAGGTACGTGGGAATA
TGGTAACCGCAGATCCCTGATACAGTTGTGTGGGTTGCAAATAGAAATAA
TCCTATCGTTGACAAAAACGGAGTATTAACCGTTAACCACAGGGGAAATC
TTGTTCTTCTCAACCAATCAAATGGAACTATCTGGTCTTCAAACGTGTCT
AGAGAAATAAAAAATCCAGTTGCACAACTCTTATATAATGGAAACCTTGT
TATTAGGGATAACTCCGGCAGTAATAGTACTGAAAGCTATTTGTGGGAGA
GCTTCTACTACCCAACAGACACTATGTTTCAAGGCATGAAATTGGGCTGG
GACTTAAAGACTGGTCTGGAACGTTATCAACATCATGGAAAAGTGCTGAT
GATCCTTCCCCCCGAAACTTACTTCCCAACTTGACATTCATGTGTTACTT
CAACTATGTTTTACAACGGGTCCGGCCAATATATTTGTACAGGACCTGGA
AATGGAGTGGCTTTTGGGTCACCCCCTTCAAAACCAACCTATATTTTAAC
CAATGGTTGTGGAGAACAAGAGTAAGTCTATCCATG
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