EY728962

Overview
NameEY728962
Unique NameEY728962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.979e-40
Identity = 85/114 (74.56%), Postives = 98/114 (85.96%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDF--MGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLG 370
            GLITK+RK++DPAA PFAK   +   +GL+EGA L EVV+KVKPHVLLGLSGV G+F+EEVL+AM+ESDSV+PAIFAMSNPT NAEC   DAFK AGE+IVFASGSPF NVDLG
Sbjct:  365 GLITKDRKDIDPAALPFAKAHHEIEGLGLQEGAGLAEVVKKVKPHVLLGLSGVGGIFHEEVLRAMKESDSVRPAIFAMSNPTNNAECCPVDAFKLAGEDIVFASGSPFANVDLG 478          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.193e-31
Identity = 70/114 (61.40%), Postives = 88/114 (77.19%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDF--MGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLG 370
            GLIT+ R+N+DP A PFA+   +    GL EGA+L EVVR+VKP VLLGLS   G+F++EVL+A++ S S +PAIF MSNPT NAECT  +AF   GENI+FASGSPF++VDLG
Sbjct:  388 GLITEARENVDPDARPFARKIKEIERQGLSEGATLAEVVREVKPDVLLGLSACGGLFSKEVLEALKHSTSTRPAIFPMSNPTRNAECTPEEAFSILGENIIFASGSPFKDVDLG 501          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.741e-31
Identity = 68/114 (59.65%), Postives = 88/114 (77.19%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDF--MGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLG 370
            GLIT++R NLDP   PFA    +    GL EGA L+EVVR+VKP VLLGLS   G+F++EVL+A+++S S +PAIFAMSNPT NAECT  +AF   G+++V+ASGSPF++VDLG
Sbjct:  385 GLITEKRANLDPEVQPFAWKENEISLQGLNEGAKLVEVVRQVKPDVLLGLSAYGGLFSKEVLEALKDSTSTRPAIFAMSNPTKNAECTPEEAFSIVGDHVVYASGSPFKDVDLG 498          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.275e-20
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDL 367
            GL+TK RK ++P    FAKD      + E  S+LEV+R  +P  L+G S V G FNEEV++AM E +  +P IFA+SNPT  AECTA +A+       ++ASGSPF N +L
Sbjct:  402 GLVTKNRKEMNPRHVQFAKD------MPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINE-RPIIFALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFEL 505          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 42/79 (53.16%), Postives = 57/79 (72.15%), Query Frame = 2
Query:  128 SLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVD 364
            SLLEVVR VKP  ++GLSG+ G F++EV++ M +    KP +FA+SNPT NAECTA  A++      +FASGSPF+ V+
Sbjct:  355 SLLEVVRDVKPTAIIGLSGIGGSFSQEVIEEMAKHVE-KPIVFALSNPTTNAECTAEQAYQWTDGRCIFASGSPFKPVE 432          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 48/129 (37.21%), Postives = 73/129 (56.59%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDL----GIFPCILNISFRFP 409
            GLI K R +L P    FA +  +   L +      +V+ +KP VL+G++ + G F +++L+ M   +  +P IFA+SNPT  AECTA   +K+     +FASGSPF+ V L     ++P   N S+ FP
Sbjct:  327 GLIVKGRASLTPEKEHFAHEHCEMKNLED------IVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNK-RPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFP 448          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDL----GIFPCILNISFRFP 409
            GLI K R +L      FA +  +   L +      +V+ +KP VL+G++ + G F +E+L+ M   +  +P IFA+SNPT  AECTA   +K+     +FASGSPF+ V L     ++P   N S+ FP
Sbjct:  327 GLIVKGRASLTAEKTRFAHEHAEMKNLED------IVKDIKPSVLIGVAAIGGAFTKEILQDMAAFNK-RPIIFALSNPTSKAECTAEQCYKYTEGRGIFASGSPFDPVTLPNGKTLYPGQGNNSYVFP 448          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14
Identity = 49/129 (37.98%), Postives = 71/129 (55.04%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDL----GIFPCILNISFRFP 409
            GLI K R +L      FA +  +   L        +V+K+KP  L+G++ + G F E++LK M   +  +P IFA+SNPT  AEC+A + +K      +FASGSPF+ V L     +FP   N S+ FP
Sbjct:  338 GLIVKGRASLTEEKEVFAHEHEEMKNLEA------IVQKIKPTALIGVAAIGGAFTEQILKDMAAFNE-RPIIFALSNPTSKAECSAEECYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFP 459          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14
Identity = 48/111 (43.24%), Postives = 66/111 (59.46%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDL 367
            GLI K R +L+     FA+D        E  SL EVVR VKP  ++G++ + G F E++L+ M  S   +P IFA+SNPT  AECTA   ++      +FASGSPF++V L
Sbjct:  373 GLIVKGRSHLNHEKEMFAQDHP------EVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMA-SFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTL 476          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.436e-14
Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDL 367
            GLI K R +L+     FA+D        E  SL EVVR VKP  ++G++ + G F E++L+ M  S   +P +FA+SNPT  AECTA   ++      +FASGSPF++V L
Sbjct:  373 GLIVKGRSHLNHEKEMFAQDHP------EVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMA-SFHERPIVFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTL 476          
The following BLAST results are available for this feature:
BLAST of EY728962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
MAON_SOLTU1.979e-4074.56NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]
MAOM_SOLTU2.193e-3161.40NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAOM_AMAHP3.741e-3159.65NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]
MAOM_ASCSU2.275e-2047.75NAD-dependent malic enzyme, mitochondrial (Fragmen... [more]
MAOX_DICDI1.292e-1553.16NADP-dependent malic enzyme OS=Dictyostelium disco... [more]
MAOX_COLLI1.093e-1437.21NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAOX_ANAPL1.093e-1437.21NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAOX_RAT1.865e-1437.98NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
MAON_HUMAN1.865e-1443.24NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAON_MOUSE2.436e-1442.34NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-G12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728962 ID=EY728962; Name=EY728962; organism=Citrus sinensis; type=EST; length=890bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTCTCATCACGAAAG
AAAGGAAGAATCTTGACCCAGCGGCAGCACCTTTTGCTAAAGATCCAGGA
GATTTTATGGGGCTTAGGGAGGGAGCTAGTCTACTTGAGGTGGTTAGAAA
GGTCAAACCCCATGTGCTTCTTGGTTTGTCTGGCGTATGTGGTGTCTTCA
ATGAAGAGGTGCTTAAGGCTATGCGAGAGTCTGATTCTGTCAAACCTGCC
ATTTTTGCTATGTCAAATCCGACCATGAATGCTGAATGCACTGCTGCTGA
TGCTTTTAAGCATGCTGGGGAAAATATAGTGTTTGCTAGTGGAAGTCCTT
TTGAGAATGTTGATCTGGGTATCTTCCCTTGTATATTGAATATCTCATTT
AGATTCCCCCTGCCCGGAGTTTTAAAAACTTCCCTCACTTATAGCTATAG
AGTATATTCAAAGCCAAACAAAGACAGAACAATCAGAGAAATACAGTTTC
AGGCATGTATCATGTGAGGCATTCCAACACACCAGGCCTCTGCTACATTA
TTAAATAAGTTTCTAATCCAAAAAGCCTAATTTATATTGTTGGAACCCAA
NTAAAATATTTGAGCTCCCACTGGCACCATGCTAATAAAGTAAGAGTGCT
GCTTCTTCCCTCTTTGTCTGATTATCTGATTATTANTTGTTTCTCTGGCA
GGAAATGGGAAAATAGGCTATGTAAATCAACCAAATACATGTATCTGTTC
CCTGGGATTGGGTTGGGGACTCTCCTTTCAAGTGCTCGTTTATAACAGAT
GGGATGTTAAACAAGCTGGAGAATGCTTGCGTCCTATAGACCGATGAAGA
AATCCCAAAGGCTTCTGTTCCTCTATGACCGTTTTCAAAA
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