EY728960

Overview
NameEY728960
Unique NameEY728960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 4.737e-72
Identity = 119/176 (67.61%), Postives = 134/176 (76.14%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCP 547
            ID YEDV  N E +LQKAVANQPVSVAIE GG AFQLY SGIFTG+CGT+LDHGV AVGYGTENG DYWIV+NSWG SWGE+GY+RMERN+  + +GKCGIA+E SY                       VCDNYY+CP+S TCCC++EYG  C+AWGCCPLE ATCCDDHYSCCP
Sbjct:  237 IDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTGKCGTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKAS-SGKCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCP 411          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 5.790e-70
Identity = 116/176 (65.91%), Postives = 134/176 (76.14%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCP 547
            ID YEDVP   E++L+KAVA+QP+S+AIE GG AFQLY+SGIF G CGT LDHGV AVGYGTENG DYWIV+NSWG SWGE+GY+RM RN+A + +GKCGIA+E SY                        CD+YY+CPESNTCCC+FEYG  CFAWGCCPLEAATCCDD+YSCCP
Sbjct:  245 IDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFDGSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASS-SGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCP 419          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.381e-63
Identity = 112/182 (61.54%), Postives = 127/182 (69.78%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXA------VCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCP 547
            ID +EDVP NDEK+LQKAVA+QPVSVAIE GG  FQLY SG+F+GRCGTSLDHGV AVGYGT+NG DYWIV+NSWG  WGE+GY+RMERN+  T TGKCGIAM ASY                             VCD+ +SCP  +TCCC F + N C  WGCCP+E ATCC DH SCCP
Sbjct:  250 IDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVT-TGKCGIAMMASYPTKSGANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCP 430          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.432e-60
Identity = 100/176 (56.82%), Postives = 125/176 (71.02%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCP 547
            ID YEDVP+N+EKALQKAVA+QPVS+A+E GG  FQ Y+SGIFTG+CGT++DHGV   GYGTENG DYWIV+NSWG++  E GY+R++RNV+ + +G CG+A+E SY                        CD Y  C    TCCC+ ++  SCF+WGCCPLE ATCC+DHYSCCP
Sbjct:  126 IDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVIAGYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSS-SGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCP 300          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 8.672e-58
Identity = 106/178 (59.55%), Postives = 118/178 (66.29%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE--NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCP 547
            ID +EDVP NDE +LQKAVA+QPVSVAI+ GG  FQLY+SG+FTGRCGT+LDHGV AVGYGT+   GA YW V+NSWG  WGE GYIRMERNV    TGKCGIAM ASY                        CD Y  CP   TCCC +   N C  WGCCP+E ATCC DH +CCP
Sbjct:  265 IDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGRCGTNLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNVTAR-TGKCGIAMMASYPIKKGPNPKPSPPSPAPSPPQQ--CDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCP 439          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.108e-42
Identity = 78/107 (72.90%), Postives = 89/107 (83.18%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 340
            ID YEDVP  DE AL+KA++ QPVSVAIE GG  FQ Y+SGIFTG CGT+LDH V AVGYG+ENG DYWIV+NSWG  WGE GYIRMERN+A + +GKCGIA+EASY
Sbjct:  253 IDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGSCGTNLDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASY 359          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.324e-41
Identity = 78/107 (72.90%), Postives = 92/107 (85.98%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 340
            ID YEDVP  DE AL++AV+ QPVSVAI+ GG AFQ Y+SGIFTG+CGT++DH V AVGYG+ENG DYWIV+NSWG+ WGE GYIRMERNVA + +GKCGIA+EASY
Sbjct:  208 IDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTNMDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVA-SKSGKCGIAIEASY 313          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.461e-37
Identity = 72/112 (64.29%), Postives = 84/112 (75.00%), Query Frame = 2
Query:    8 PSSYIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYG-TENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 340
            P   ID ++DVP N+E AL +AVANQP+SV+IE  G  FQ Y  G+FTGRCGT LDHGV  VGYG T +G  YWIVKNSWG  WGE+GYIRM+R ++    GKCGIAMEASY
Sbjct:  233 PVVSIDGHQDVPANNENALMQAVANQPISVSIEASGYGFQFYSEGVFTGRCGTELDHGVAIVGYGATRDGTKYWIVKNSWGEEWGESGYIRMQRGISDK-RGKCGIAMEASY 343          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.439e-36
Identity = 68/107 (63.55%), Postives = 86/107 (80.37%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 340
            ID YEDVP +DEK+L+KAVA+QPVSVAIE    AFQLY+SG+ TG CG SLDHGV  VGYG+ +G DYWI++NSWG +WG++GY++++RN+     GKCGIAM  SY
Sbjct:  241 IDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMTGTCGISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDPF-GKCGIAMMPSY 346          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.470e-36
Identity = 74/112 (66.07%), Postives = 82/112 (73.21%), Query Frame = 2
Query:    8 PSSYIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 340
            P+  ID +E+VP NDE AL KAVANQPVSVAI+ GG  FQ Y  G+FTG CGT LDHGV  VGYGT  +G  YW VKNSWG  WGE GYIRMER ++    G CGIAMEASY
Sbjct:  230 PAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDK-EGLCGIAMEASY 340          
The following BLAST results are available for this feature:
BLAST of EY728960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
ORYA_ORYSJ4.737e-7267.61Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
RD21A_ARATH5.790e-7065.91Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYB_ORYSJ1.381e-6361.54Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSPL_SOLLC5.432e-6056.82Low-temperature-induced cysteine proteinase (Fragm... [more]
CYSP1_ORYSJ8.672e-5859.55Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
GCP1_ARATH5.108e-4272.90Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP4_BRANA4.324e-4172.90Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CYSP_HEMSP6.461e-3764.29Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CPR1_ARATH1.439e-3663.55Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CYSEP_RICCO5.470e-3666.07Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-G10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728960 ID=EY728960; Name=EY728960; organism=Citrus sinensis; type=EST; length=680bp
CACGCGTCCGAGTAGTTACATTGATGACTATGAAGATGTTCCCCTAAATG
ACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTTGCC
ATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTAC
GGGAAGATGTGGGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATG
GCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGT
AGCTGGGGAGAGGCTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCAC
TCTCACGGGCAAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAAAGA
AAGGCCAAAATCCTCCCAACCCTGGACCGTCCCCTCCATCTCCAACAAAG
CCTCCTGCTGTGTGTGACAATTATTACTCTTGCCCTGAGAGCAACACTTG
CTGCTGTGTCTTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCTGCC
CGCTTGAGGCTGCCACCTGCTGTGATGACCACTATAGCTGCTGCCCCATG
ACTANCCATCTGTAATGTCGTGCTGGGACTGCTTGATGAGCATGACAACC
ATTGGGAGTGAGGCTNAGACGCCCCTGCTAACTTACGGCTCTGATCAGTG
ATCTCTATTGCTACGGCGGAATCCCATTTG
back to top