EY728957

Overview
NameEY728957
Unique NameEY728957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728957 vs. ExPASy Swiss-Prot
Match: MPPA_SOLTU (Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 6.248e-96
Identity = 153/203 (75.37%), Postives = 172/203 (84.73%), Query Frame = 2
Query:   14 LPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAA 622
            L  V L P LPDYVEP KT+I+TL NG+K+ASE SV+P ASI LYV CGSIYE+P S+G THLLERMAF+ST NRSHLRIVRE+EAIGGNV ASASRE M Y++DALKTYVP+MVE+L DCVRNP FLDWEV EQL KVK+EISE S NPQ LLLEA+HSAGY+G   N L+A E+ INRLNST+LEEFVAENYT PRMVLAA
Sbjct:   57 LNDVKLSPPLPDYVEPAKTQITTLANGLKVASEASVNPAASIGLYVDCGSIYETPASYGATHLLERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLADCVRNPAFLDWEVKEQLEKVKAEISEYSKNPQHLLLEAVHSAGYAGPYGNSLMATEATINRLNSTVLEEFVAENYTAPRMVLAA 259          

HSP 2 Score: 65.0846 bits (157), Expect = 6.248e-96
Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 3
Query:  615 LLLSGVEHDQXXXXXXXXXXXXXXIHPREEPKSVYLGGDYRCQADSGGPVNPFVLAFELPGGWLKDKDA 821
            L  SGVEH++              +   EEPK VY+GGDYRCQAD+   +  F LAFE+PGGW+ +K++
Sbjct:  257 LAASGVEHEEFLKVAEPLLSDLPKVATIEEPKPVYVGGDYRCQADA--EMTHFALAFEVPGGWMSEKES 323          
BLAST of EY728957 vs. ExPASy Swiss-Prot
Match: MPPA1_ARATH (Probable mitochondrial-processing peptidase subunit alpha-1 OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 1.831e-86
Identity = 146/203 (71.92%), Postives = 168/203 (82.76%), Query Frame = 2
Query:   14 LPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAA 622
            L GVSLPP L D VEP K +I+TLPNG+KIASET+ +P ASI LYV CGSIYE+P   G THLLERMAF+ST NR+H R+VRE+EAIGGN  ASASREQM Y+ DALKTYVPEMVE+LID VRNP FLDWEVNE+L K+K EI+E++ NP   LLEAIHSAGYSG LA+PL APESA++RLN  LLEEF+ EN+T  RMVLAA
Sbjct:   60 LQGVSLPPPLADKVEPSKLQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGATHLLERMAFKSTLNRTHFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELRKMKVEIAELAKNPMGFLLEAIHSAGYSGPLASPLYAPESALDRLNGELLEEFMTENFTAARMVLAA 262          

HSP 2 Score: 47.7506 bits (112), Expect = 1.831e-86
Identity = 26/69 (37.68%), Postives = 37/69 (53.62%), Query Frame = 3
Query:  615 LLLSGVEHDQXXXXXXXXXXXXXXIHPREEPKSVYLGGDYRCQADSGGPVNPFVLAFELPGGWLKDKDA 821
            L  SGVEH++              + P+  PKS Y+GGD+R    +GG    F +AFE+P GW  +K+A
Sbjct:  260 LAASGVEHEELLKVAEPLTSDLPNVPPQLAPKSQYVGGDFR--QHTGGEATHFAVAFEVP-GWNNEKEA 325          
BLAST of EY728957 vs. ExPASy Swiss-Prot
Match: MPPA2_ARATH (Probable mitochondrial-processing peptidase subunit alpha-2 OS=Arabidopsis thaliana GN=At3g16480 PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 7.561e-85
Identity = 147/203 (72.41%), Postives = 162/203 (79.80%), Query Frame = 2
Query:   14 LPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAA 622
            L GVSLPP L D+VEP K K +TLPNG+ IA+E S +P ASI LYV CGSIYE+P   G THLLERMAF+ST NRSH R+VRE+EAIGGN  ASASREQMGY+ DALKTYVPEMVE+LID VRNP FLDWEVNE+L KVK EI E + NP   LLEA+HSAGYSGALANPL APESAI  L   +LE FV ENYT  RMVLAA
Sbjct:   56 LAGVSLPPPLSDHVEPSKLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGATHLLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSVRNPAFLDWEVNEELRKVKVEIGEFATNPMGFLLEAVHSAGYSGALANPLYAPESAITGLTGEVLENFVFENYTASRMVLAA 258          

HSP 2 Score: 46.2098 bits (108), Expect = 7.561e-85
Identity = 26/69 (37.68%), Postives = 36/69 (52.17%), Query Frame = 3
Query:  615 LLLSGVEHDQXXXXXXXXXXXXXXIHPREEPKSVYLGGDYRCQADSGGPVNPFVLAFELPGGWLKDKDA 821
            L  SGV+H++              +    EPKS Y+GGD+R    +GG    F LAFE+P GW  +K+A
Sbjct:  256 LAASGVDHEELLKVVEPLLSDLPNVPRPAEPKSQYVGGDFR--QHTGGEATHFALAFEVP-GWNNEKEA 321          
BLAST of EY728957 vs. ExPASy Swiss-Prot
Match: QCR2_HUMAN (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens GN=UQCRC2 PE=1 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 2.880e-30
Identity = 69/187 (36.90%), Postives = 109/187 (58.29%), Query Frame = 2
Query:   56 EPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVL 616
            +P   + + LPNG+ IAS  + SPV+ I L++  GS YE   + GTTHLL   +  +T+  S  +I R +EA+GG +  +A+RE M Y+ + L+  V  ++E L++    P F  WEV +   ++K + +    NPQ+ ++E +H+A Y  ALANPL  P+  I ++ S  L  FV  ++T  RM L
Sbjct:   34 QPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRIGKVTSEELHYFVQNHFTSARMAL 220          
BLAST of EY728957 vs. ExPASy Swiss-Prot
Match: QCR2_RAT (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus GN=Uqcrc2 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 9.264e-29
Identity = 65/197 (32.99%), Postives = 113/197 (57.36%), Query Frame = 2
Query:   26 SLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVL 616
            S P  +P  ++P + + + LPNG+ IAS  + +P++ I L++  GS YE+    GT+HLL   +  +T+  S  +I R +EA+GG +  +A+RE M Y+ + ++  +  ++E L++    P F  WEV    +++K + +    NPQ+ ++E +H   Y  ALANPL  P+  + ++ S  L  FV  ++T  RM L
Sbjct:   25 SAPGGVP--LQPQELEFTKLPNGLVIASLENYAPLSRIGLFIKAGSRYENYNYLGTSHLLRLASTLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRDDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDKAVAFQNPQTRIIENLHDVAYKNALANPLYCPDYRMGKITSEELHYFVQNHFTSARMAL 219          
BLAST of EY728957 vs. ExPASy Swiss-Prot
Match: QCR2_MOUSE (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus GN=Uqcrc2 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.598e-28
Identity = 62/188 (32.98%), Postives = 108/188 (57.45%), Query Frame = 2
Query:   53 VEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVL 616
            ++P   + + LPNG+ IAS  + +P++ I L+V  GS YE   + GT+HLL   +  +T+  S  +I R +EA+GG +  +A+RE M Y+ + +++ +  ++E L++    P F  WEV    +++K + +    N Q+ ++E +H   Y  ALANPL  P+  + ++ S  L  FV  ++T  RM L
Sbjct:   33 LQPQDLEFTKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRLASSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDKAVAFQNSQTRIIENLHDVAYKNALANPLYCPDYRMGKITSEELHYFVQNHFTSARMAL 220          
BLAST of EY728957 vs. ExPASy Swiss-Prot
Match: QCR2_BOVIN (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus GN=UQCRC2 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.980e-27
Identity = 64/204 (31.37%), Postives = 112/204 (54.90%), Query Frame = 2
Query:    5 ASALPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVL 616
            A  +     P  +P +  P   + + LPNG+ IAS  + +P + I L++  GS YE+  + GT+HLL   +  +T+  S  +I R +EA+GG +  +++RE M Y+ + L+  V  ++E L++    P F  WEV     +++ + +    NPQ+ ++E +H+A Y  ALAN L  P+  I ++    L ++V  ++T  RM L
Sbjct:   19 APKVKATEAPAGVPPH--PQDLEFTRLPNGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAYRNALANSLYCPDYRIGKVTPVELHDYVQNHFTSARMAL 220          
BLAST of EY728957 vs. ExPASy Swiss-Prot
Match: MPPB_MOUSE (Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.980e-27
Identity = 64/187 (34.22%), Postives = 105/187 (56.15%), Query Frame = 2
Query:   65 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAA 622
            +T+++ L NG+++ASE S     ++ L++  GS YE+  + GT H LE MAF+ T+ RS L +  E+E +G ++ A  SREQ  Y   A    +P  VE+L D ++N    + E+  +   +  E+ EV  N Q ++ + +H+  Y   AL   +L P   I  +N   L +++  +Y GPR+VLAA
Sbjct:   57 ETQVTCLENGLRVASENSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKGPRIVLAA 243          
BLAST of EY728957 vs. ExPASy Swiss-Prot
Match: MPPB_BOVIN (Mitochondrial-processing peptidase subunit beta OS=Bos taurus GN=PMPCB PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.980e-27
Identity = 64/187 (34.22%), Postives = 105/187 (56.15%), Query Frame = 2
Query:   65 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAA 622
            +T+++ L NG+++ASE S     ++ L++  GS YE+  + GT H LE MAF+ T+ RS L +  E+E +G ++ A  SREQ  Y   A    +P  VE+L D ++N    + E+  +   +  E+ EV  N Q ++ + +H+  Y   AL   +L P   I  +N   L +++  +Y GPR+VLAA
Sbjct:   58 ETRVTCLENGLRVASEDSGLATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKGPRIVLAA 244          
BLAST of EY728957 vs. ExPASy Swiss-Prot
Match: MPPB_DICDI (Mitochondrial-processing peptidase subunit beta OS=Dictyostelium discoideum GN=mppB PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.083e-27
Identity = 66/196 (33.67%), Postives = 111/196 (56.63%), Query Frame = 2
Query:   44 PDYVEPG-KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNR-SHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAA 622
            P Y++   +TKI+TL NG+++A+E +   VAS+ ++V  GS+YE+  + G  H LE M F+ T  R +   I  E+E +GG++ A  SRE   Y    LK  VP  V++L D ++N  F    + ++   + SE   + +    ++ + +H+A + G AL   +L P   I  +    ++EF+ ENYTG R+V++A
Sbjct:   26 PSYLKISPETKITTLSNGIRVATEQTYGEVASVGVWVDSGSVYETDKNNGVAHFLEHMIFKGTAKRPTPQSIETEIENMGGSLNAFTSREHSAYYMKVLKDNVPNAVDILSDILQNSKFETSLIEQERDTILSENDYIQSKEDEVVFDQLHAAAFQGSALGRTILGPVENIKSITREQIQEFINENYTGDRLVISA 221          
The following BLAST results are available for this feature:
BLAST of EY728957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
MPPA_SOLTU6.248e-9675.37Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA1_ARATH1.831e-8671.92Probable mitochondrial-processing peptidase subuni... [more]
MPPA2_ARATH7.561e-8572.41Probable mitochondrial-processing peptidase subuni... [more]
QCR2_HUMAN2.880e-3036.90Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
QCR2_RAT9.264e-2932.99Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
QCR2_MOUSE4.598e-2832.98Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
QCR2_BOVIN2.980e-2731.37Cytochrome b-c1 complex subunit 2, mitochondrial O... [more]
MPPB_MOUSE2.980e-2734.22Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_BOVIN2.980e-2734.22Mitochondrial-processing peptidase subunit beta OS... [more]
MPPB_DICDI5.083e-2733.67Mitochondrial-processing peptidase subunit beta OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-G07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728957 ID=EY728957; Name=EY728957; organism=Citrus sinensis; type=EST; length=836bp
CCACGCGTCCGCACTTCCGGGTGTCTCTCTTCCACCTTCATTGCCTGATT
ATGTTGAACCTGGTAAAACCAAGATTTCTACTCTACCAAATGGTGTCAAA
ATTGCCTCGGAAACATCAGTGAGTCCTGTAGCCTCAATATCGTTATATGT
TGGTTGTGGTTCAATTTATGAGTCACCAATCTCATTTGGGACAACACACT
TGCTTGAGCGTATGGCTTTTAGAAGTACAAGAAATAGGAGTCACTTGCGT
ATTGTGCGAGAAGTGGAGGCAATTGGTGGCAATGTCCAAGCCTCAGCTTC
TAGGGAGCAGATGGGTTACTCCTTTGATGCTTTGAAAACTTATGTTCCTG
AAATGGTAGAGCTTCTTATTGACTGTGTGAGAAACCCTGTTTTTCTGGAT
TGGGAGGTCAACGAACAGCTCACAAAGGTGAAATCTGAGATTAGTGAGGT
TTCCAACAATCCTCAAAGCTTGCTTTTGGAGGCAATTCACTCAGCTGGTT
ACTCTGGTGCATTGGCTAATCCTCTTCTAGCCCCGGAATCTGCTATAAAT
AGATTAAACTCTACACTTCTCGAAGAATTTGTTGCTGAAAATTATACTGG
TCCTCGGATGGTACTTGCTGCTTTCTGGTGTTGAACATGACCAGTTGGTA
TCTGTANCAGAACCACTTTTATCTGAACTACCCAGTATCCATCCTCGCGA
AGAGCCCAAATCTGTGTACCTGGGAGGTGATTATCGTTGTCAAGCTGATT
CAGGGGGACCAGTTAACCCATTTGTTCTTGCATTTGAACTTCCTGGTGGT
TGGCTTAAGGATAAGGATGCATGACTTTGACAGTTC
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