EY728949

Overview
NameEY728949
Unique NameEY728949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length310
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728949 vs. ExPASy Swiss-Prot
Match: TAUA_ECOLI (Taurine-binding periplasmic protein OS=Escherichia coli (strain K12) GN=tauA PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.549e-24
Identity = 51/98 (52.04%), Postives = 66/98 (67.35%), Query Frame = -3 
Query:   15 IDPSKVTILNLXXXXXXXAWKRGDIDATYVWDPALGVAKENGKVLITSGELAKFGAPTFDAWIVRKDFAEKHPEIVTAFAKVXLDAYAAYRKDPQAWL 308
            I P +V I+NL       AW+RGDID  YVW PA+   +++GKVL  S ++ ++GAPT D W+VRKDFAEKHPE+V AFAK  +DA   Y  +P  WL
Sbjct:  146 IKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPDVWL 243
The following BLAST results are available for this feature:
BLAST of EY728949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TAUA_ECOLI1.549e-2452.04Taurine-binding periplasmic protein OS=Escherichia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-F09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728949 ID=EY728949; Name=EY728949; organism=Citrus sinensis; type=EST; length=310bp
TTGCCTTTGTCCGCCAGCCAGGCTTGTGGGTCTTTGCGGTAAGCGGCGTA
GGCATCCAGGNTGACCTTGGCAAAAGCCGTGACGATTTCCGGGTGCTTCT
CGGCGAAATCCTTACGCACGATCCAGGCATCGAAAGTCGGTGCGCCGAAC
TTGGCCAGTTCGCCGGAGGTGATCAGCACCTTGCCGTTTTCCTTGGCCAC
GCCGAGGGCTGGGTCCCATACGTAAGTCGCGTCGATATCACCACGCTTCC
AGGCGGCGATGATGGCCGGCGGGGCGAGGTTGAGGATGGTCACTTTGGAA
GGGTCGATGT
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