EY728947

Overview
NameEY728947
Unique NameEY728947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728947 vs. ExPASy Swiss-Prot
Match: Y2991_ARATH (Uncharacterized protein At2g39910 OS=Arabidopsis thaliana GN=At2g39910 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.739e-44
Identity = 122/308 (39.61%), Postives = 163/308 (52.92%), Query Frame = 2 
Query:   32 SGSGLHHRLVQLINPILDSLEKTNCAPPSAD--STKSIICALLETASQNDGQVLTSFKNSXXXXXXXXXXXXYSTHDSLSWIPGHVXXXXXXXFRAISNEYDAVFN-----RPLV--------VDLLPEVAPSLKETIKQ-------DDSESATSSARVPVLRVILAAYQFRWFVTQVECPLLGKVSHLVIPCALTALDHWSSEGQGQGMIALIHLLKNVDAIELGAYDAVILDACCQNIPSADEIWHLVXEMSVLVVAIAHKNIGAAHGLKGCLTKC*S-LGAPPRK*DRRIAWLKLSTHFPXLLGL 886
            + S LH RL++L  PI + L +T   P  +   STK I+ +LL   S +      S K S             STH+ LSWIP ++       F  IS +  + F+       LV        +++LP V P LK+ I++       D  + + + AR PV   ILAA+Q RWFVTQV+ P L K  +LV+PCALTALDHWS E +GQGMI  +HL KNV + +LG Y  V+LDACCQNI S DEIW  V E+SVL+V   H N   +   +  + +    L   PR  +RRI WL+        LGL
Sbjct:   16 TSSDLHGRLLRLSEPIAEILRRTQYTPQESSKVSTKDILLSLLPNTSSSRLANEESIK-SLALACALLASSRSSTHELLSWIPENLSVMGESTFWEISRDCFSDFSSNSNAEKLVELVEDSEKIEMLPIVLPELKDGIEKSSLGKGSDAEDVSAAMARTPVGYAILAAHQLRWFVTQVKKPNLVKFCNLVVPCALTALDHWSPEVKGQGMITFVHLAKNVSSGDLGLYGDVVLDACCQNIASDDEIWIHVVELSVLLVTKIHPNNPRSPWYEKIMNEMLGHLERQPRNKERRITWLRFVEPLLNSLGL 322
The following BLAST results are available for this feature:
BLAST of EY728947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2991_ARATH1.739e-4439.61Uncharacterized protein At2g39910 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-F07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728947 ID=EY728947; Name=EY728947; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGCAAAAATGTCAATAGCTCTCTCAGGCTCAGGTCTCCATC
ATCGTCTCGTTCAGTTAATAAATCCGATATTAGACTCGCTTGAGAAAACA
AACTGCGCGCCACCGTCAGCAGACTCGACAAAATCAATAATATGCGCTCT
CCTCGAAACGGCGTCGCAAAACGACGGCCAGGTTCTAACTTCCTTCAAAA
ACTCGACTCTCGCACTCGCATTACTCATCACTGCCCAGACTTATTCCACT
CACGACTCTCTCTCCTGGATTCCTGGACACGTCTCTTCAGCCGCCGCCTC
CGCTTTTCGCGCCATCTCTAACGAATACGACGCCGTTTTCAACAGACCTT
TGGTGGTCGACTTGTTGCCTGAAGTGGCCCCCTCTTTGAAGGAGACGATT
AAACAGGATGACAGTGAATCCGCCACGTCGTCCGCTAGGGTCCCCGTTCT
TCGCGTGATTTTGGCCGCGTATCAGTTCCGGTGGTTCGTTACTCAGGTCG
AGTGTCCTCTTCTGGGGAAGGTGTCTCATTTGGTAATTCCTTGTGCGTTG
ACCGCGCTTGACCATTGGTCGTCGGAGGGTCAAGGACAAGGCATGATTGC
ACTCATACATCTTCTGAAAAATGTGGATGCCATTGAGCTTGGTGCGTATG
ACGCTGTAATTCTTGATGCGTGTTGCCAGAATATTCCTTCCGCTGATGAA
ATATGGCACCTGGTANTTGAAATGTCTGTACTTGTTGTCGCTATTGCTCA
CAAAAATATTGGCGCAGCTCATGGATTGAAAGGATGCTTAACGAAATGTT
AGTCACTTGGAGCGCCACCAAGAAAATAGGATCGCCGTATAGCATGGCTC
AAATTATCCACCCACTTTCCANCGCTGTTGGGTTTGGTTTATT
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