EY728942

Overview
NameEY728942
Unique NameEY728942
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728942 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.610e-79
Identity = 139/148 (93.92%), Postives = 145/148 (97.97%), Query Frame = 2
Query:  200 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL*EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMXQSDKAKYESTARSWTQKYSWG 643
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDIL EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM ++D+AKYESTARSWTQKY+ G
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148          
BLAST of EY728942 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 3.587e-79
Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 2
Query:  200 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL*EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMXQSDKAKYESTARSWTQKYSWG 643
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPS+SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM ++DK KYESTARSWTQKY+ G
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148          
BLAST of EY728942 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 6.118e-79
Identity = 139/148 (93.92%), Postives = 144/148 (97.30%), Query Frame = 2
Query:  200 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL*EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMXQSDKAKYESTARSWTQKYSWG 643
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM ++DK KYESTAR+WTQKY+ G
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148          
BLAST of EY728942 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 7.990e-79
Identity = 138/148 (93.24%), Postives = 145/148 (97.97%), Query Frame = 2
Query:  200 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL*EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMXQSDKAKYESTARSWTQKYSWG 643
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP+DSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM ++D+AKYE+TARSWTQKY+ G
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148          
BLAST of EY728942 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.965e-78
Identity = 136/148 (91.89%), Postives = 145/148 (97.97%), Query Frame = 2
Query:  200 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL*EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMXQSDKAKYESTARSWTQKYSWG 643
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM ++D+AKYE+TAR+WTQKY+ G
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148          
BLAST of EY728942 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 2.842e-76
Identity = 132/148 (89.19%), Postives = 144/148 (97.30%), Query Frame = 2
Query:  200 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL*EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMXQSDKAKYESTARSWTQKYSWG 643
            MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGP +SPYAGGVFLV+IHFPPDYPFKPPKV+F+TKV+HPNINSNGSICLDIL EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM ++D++KYESTARSWTQKY+ G
Sbjct:    1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148          
BLAST of EY728942 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 5.016e-73
Identity = 126/148 (85.14%), Postives = 139/148 (93.92%), Query Frame = 2
Query:  200 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL*EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMXQSDKAKYESTARSWTQKYSWG 643
            MASKRI KEL+DLQ+DPP SCSAGP  +DMF WQATIMGP+DSP+AGGVFLVTIHFPPDYPFKPPKVAFRTKV+HPNINSNGSICLDIL EQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH+ ++D+ KYESTA+SWTQKY+ G
Sbjct:    1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148          
BLAST of EY728942 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 7.243e-72
Identity = 123/146 (84.25%), Postives = 137/146 (93.84%), Query Frame = 2
Query:  200 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL*EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMXQSDKAKYESTARSWTQKYS 637
            MA++RILKELK+LQ+DPP SCSAGP  EDMFHWQATIMGP++SPY+GGVFLV IHFPPDYPFKPPKV FRTKVFHPNINSNG+ICLDIL +QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+ ++DK KYE+ ARSWTQKY+
Sbjct:    1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYA 146          
BLAST of EY728942 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 7.016e-67
Identity = 116/146 (79.45%), Postives = 132/146 (90.41%), Query Frame = 2
Query:  200 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL*EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMXQSDKAKYESTARSWTQKYS 637
            MA KRI KEL DL +DPP+SCSAGPV ED+FHWQATIMGPSDSPYAGGVF + IHFP DYPFKPPKV F T+++HPNINSNGSICLDIL +QWSPALTISKVLLSICS+LTDPNPDDPLVPEIAH+ ++ +A+YESTAR WT+KY+
Sbjct:    1 MALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTAREWTRKYA 146          
BLAST of EY728942 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.666e-66
Identity = 113/146 (77.40%), Postives = 132/146 (90.41%), Query Frame = 2
Query:  200 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL*EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMXQSDKAKYESTARSWTQKYS 637
            MA KRI KEL DL +DPP+SCSAGPV ED+FHWQATIMGP DSPY+GGVF + IHFP DYPFKPPKV F T+++HPNINSNGSICLDIL +QWSPALTISKVLLSICS+LTDPNPD+PLVPEIAH+ ++D+A+YE+TAR WT+KY+
Sbjct:    1 MAFKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVYKTDRARYEATAREWTRKYA 146          
The following BLAST results are available for this feature:
BLAST of EY728942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
UBC28_ARATH1.610e-7993.92Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC10_ARATH3.587e-7994.59Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC9_ARATH6.118e-7993.92SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC4_SOLLC7.990e-7993.24Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC8_ARATH3.965e-7891.89Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC11_ARATH2.842e-7689.19Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC30_ARATH5.016e-7385.14Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC29_ARATH7.243e-7284.25Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC1_MAGGR7.016e-6779.45Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnapor... [more]
UBC1_COLGL2.666e-6677.40Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletot... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-F02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728942 ID=EY728942; Name=EY728942; organism=Citrus sinensis; type=EST; length=874bp
CACGCGTCCGATTTGTGTTGAAGAACAACGAAGCAAGGGGTTGATAGAGG
AGCGAGGCGGGGGCGGCTTGACGACCTAGATCTGCTTCACCGTTTCGCTT
TCTCGACGCTATCGCTCTCCGATCCTGTTCTCTGCCGCGCAAGTTTCGCA
GGTCTTAAGGTTCGTTGTAGTTTCAATTTTAATAATCCCCTGAAGAGTCA
TGGCTTCAAAGCGTATTTTGAAGGAACTCAAGGATTTGCAGAAGGATCCT
CCCACGTCTTGCAGCGCTGGCCCTGTGGCTGAAGACATGTTCCACTGGCA
AGCAACAATTATGGGCCCTTCTGATAGCCCATATGCAGGAGGTGTATTTT
TAGTTACCATTCATTTTCCTCCTGATTATCCTTTCAAGCCCCCAAAGGTT
GCTTTTAGGACCAAGGTCTTCCACCCGAACATCAACAGCAATGGAAGCAT
CTGTCTTGATATCCTNTAAGAACAGTGGAGTCCAGCGCTTACCATTTCAA
AGGTCCTGCTCTCTATCTGCTCCTTGCTTACTGATCCAAATCCTGACGAC
CCTCTTGTACCGGAGATTGCCCACATGTANCAGTCCGACAAGGCCAAATA
TGAATCCACGGCCAGGAGCTGGACACAGAAGTATTCATGGGGATGAAGGT
TGTTAGGATATTGCAGAAAAAGGGACACATTTATTGAAATATGTGGTGTG
TGTTGGCTATCTATTTTCTTTAACTTGCTTGGGGGAAGGGCAACTTTGGT
GTTTAAAATGGGTGTGGGGATTGCAGGGCCGGACGTTTTATGTTAATGTG
AATGTTGGTGTTTAAGCTCCTTGAAGGATGTAATTATGGCTTAGTACTGT
TAAAAAAAAAAAAAAGGGGCCGTC
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