EY728935

Overview
NameEY728935
Unique NameEY728935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728935 vs. ExPASy Swiss-Prot
Match: CTPV_MYCTU (Probable cation-transporting ATPase V OS=Mycobacterium tuberculosis GN=ctpV PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.361e-31
Identity = 68/159 (42.77%), Postives = 106/159 (66.67%), Query Frame = -3
Query:  238 ARGWGTSLLSGDSSPMVASVALELGIDEAHGGLRPDDKLQMLQQLHMEGRKVLMLGDGVNDVPVLVAADISVAMGSATDLAKTSADAVLLSNRLDALVQAFTLARRTRRVIIENLLWAGLYNGLMLPFAALGWITPIWAAIGMSLSSLTVVINALRLTR 714
            A G   ++++GD++   A++A ++GI++    + P DK+  +++L  +GR V M+GDGVND P LV AD+ +A+G+ TD+A  ++D  L+S RLD +V+A  L+R+T R I +NL WA  YN   +P AALG + P+ A   M  SS++VV N+LRL R
Sbjct:  604 AMGLQVAMITGDNARTAAAIAKQVGIEKVLAEVLPQDKVAEVRRLQDQGRVVAMVGDGVNDAPALVQADLGIAIGTGTDVAIEASDITLMSGRLDGVVRAIELSRQTLRTIYQNLGWAFGYNTAAIPLAALGALNPVVAGAAMGFSSVSVVTNSLRLRR 762          
BLAST of EY728935 vs. ExPASy Swiss-Prot
Match: FIXI_RHILV (Nitrogen fixation protein fixI OS=Rhizobium leguminosarum bv. viciae GN=fixI PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.439e-31
Identity = 74/164 (45.12%), Postives = 103/164 (62.80%), Query Frame = -3
Query:  223 ARGWGTSLLSGDSSPMVASVALELGIDEAHGGLRPDDKLQMLQQLHMEGRKVLMLGDGVNDVPVLVAADISVAMGSATDLAKTSADAVLLSNRLDALVQAFTLARRTRRVIIENLLWAGLYNGLMLPFAALGWITPIWAAIGMSLSSLTVVINALRLTRMPSTP 714
            A G  T ++SGD   +V + A  LGID A G L P  K++  Q+L+ EGR+VLM+GDG+ND P L AA +S+A  +A+D+ + +AD V   +RLDA+ +A  +ARR+  +I +N   A  YN L +P A  G  TP+ AA+ MS SS+ VV NALRL      P
Sbjct:  581 AAGLETLIVSGDRQTVVDNTAHALGIDRALGSLTPKQKVEECQRLNGEGRRVLMVGDGINDAPALAAAHVSMAPATASDIGRQAADLVFFIDRLDAVPEAIAVARRSASLIRQNFALAIGYNVLAVPIAIAGLATPLIAAVAMSTSSIIVVTNALRLNGFGKRP 744          
BLAST of EY728935 vs. ExPASy Swiss-Prot
Match: CTPB_MYCTU (Cation-transporting P-type ATPase B OS=Mycobacterium tuberculosis GN=ctpB PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.393e-29
Identity = 68/158 (43.04%), Postives = 100/158 (63.29%), Query Frame = -3
Query:  244 KARGWGTSLLSGDSSPMVASVALELGIDEAHGGLRPDDKLQMLQQLHMEGRKVLMLGDGVNDVPVLVAADISVAMGSATDLAKTSADAVLLSNRLDALVQAFTLARRTRRVIIENLLWAGLYNGLMLPFAALGWITPIWAAIGMSLSSLTVVINALRL 717
            ++RG  T LL+GD+     +VA ++GID A   + P+ K+ ++Q+L  EG  V M+GDG+ND P LV AD+ +A+G  TD+A  +AD +L+ + L+ + QA  LAR T R I  N++WA  YN   +P AA G + P+ A   M+ SS  VV N+LRL
Sbjct:  589 RSRGLRTILLTGDNRAAADAVAAQVGIDSAVADMLPEGKVDVIQRLREEGHTVAMVGDGINDGPALVGADLGLAIGRGTDVALGAADIILVRDDLNTVPQALDLARATMRTIRMNMIWAFGYNVAAIPIAAAGLLNPLIAGAAMAFSSFFVVSNSLRL 746          
BLAST of EY728935 vs. ExPASy Swiss-Prot
Match: CTPB_MYCBO (Cation-transporting P-type ATPase B OS=Mycobacterium bovis GN=ctpB PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.393e-29
Identity = 68/158 (43.04%), Postives = 100/158 (63.29%), Query Frame = -3
Query:  244 KARGWGTSLLSGDSSPMVASVALELGIDEAHGGLRPDDKLQMLQQLHMEGRKVLMLGDGVNDVPVLVAADISVAMGSATDLAKTSADAVLLSNRLDALVQAFTLARRTRRVIIENLLWAGLYNGLMLPFAALGWITPIWAAIGMSLSSLTVVINALRL 717
            ++RG  T LL+GD+     +VA ++GID A   + P+ K+ ++Q+L  EG  V M+GDG+ND P LV AD+ +A+G  TD+A  +AD +L+ + L+ + QA  LAR T R I  N++WA  YN   +P AA G + P+ A   M+ SS  VV N+LRL
Sbjct:  589 RSRGLRTILLTGDNRAAADAVAAQVGIDSAVADMLPEGKVDVIQRLREEGHTVAMVGDGINDGPALVGADLGLAIGRGTDVALGAADIILVRDDLNTVPQALDLARATMRTIRMNMIWAFGYNVAAIPIAAAGLLNPLIAGAAMAFSSFFVVSNSLRL 746          
BLAST of EY728935 vs. ExPASy Swiss-Prot
Match: Y290_HAEIN (Probable cation-transporting ATPase HI0290 OS=Haemophilus influenzae GN=HI0290 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29
Identity = 66/153 (43.14%), Postives = 105/153 (68.63%), Query Frame = -3
Query:  235 LLSGDSSPMVASVALELGIDEAHGGLRPDDKLQMLQQLHMEGRKVLMLGDGVNDVPVLVAADISVAMGSATDLAKTSADAVLLSNRLDALVQAFTLARRTRRVIIENLLWAGLYNGLMLPFAALGWITPIWAAIGMSLSSLTVVINALRLTRM 693
            ++SGD   +V  +A +LGI +A G L P DK + +Q+L   G  V M+GDG+ND P L +A++S AM S++D+A+ +A A L+ + ++ LV A  +AR T + I +NL +A +YN L +P AA G+++PI A   M+LSS++V++NALRL ++
Sbjct:  568 IMSGDQQSVVDYIAKQLGIKKAFGKLTPRDKAEQIQKLKDLGHIVAMVGDGINDAPALASANVSFAMKSSSDIAEQTASATLMQHSVNQLVDALFIARATLKNIKQNLFFALIYNILGIPLAAFGFLSPIIAGAAMALSSISVLMNALRLKKV 720          
BLAST of EY728935 vs. ExPASy Swiss-Prot
Match: CTPA_MYCTU (Cation-transporting P-type ATPase A OS=Mycobacterium tuberculosis GN=ctpA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.513e-28
Identity = 67/163 (41.10%), Postives = 97/163 (59.51%), Query Frame = -3
Query:  223 RGWGTSLLSGDSSPMVASVALELGIDEAHGGLRPDDKLQMLQQLHMEGRKVLMLGDGVNDVPVLVAADISVAMGSATDLAKTSADAVLLSNRLDALVQAFTLARRTRRVIIENLLWAGLYNGLMLPFAALGWITPIWAAIGMSLSSLTVVINALRLTRMPSTP 711
            RG  T LL+GD+    A+VA  +GIDE    + P+ K+ +++QL   G  V M+GDG+ND P L  AD+ +A+G  TD+A  +AD +L+ + LD +  A  LAR T R +  N++WA  YN   +P AA G + P+ A   M+ SS  VV N+LRL +    P
Sbjct:  582 RGLRTMLLTGDNPESAAAVATRVGIDEVIADILPEGKVDVIEQLRDRGHVVAMVGDGINDGPALARADLGMAIGRGTDVAIGAADIILVRDHLDVVPLALDLARATMRTVKLNMVWAFGYNIAAIPVAAAGLLNPLVAGAAMAFSSFFVVSNSLRLRKFGRYP 744          
BLAST of EY728935 vs. ExPASy Swiss-Prot
Match: CTPA_MYCLE (Cation-transporting P-type ATPase A OS=Mycobacterium leprae GN=ctpA PE=3 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 4.513e-28
Identity = 66/156 (42.31%), Postives = 96/156 (61.54%), Query Frame = -3
Query:  244 RGWGTSLLSGDSSPMVASVALELGIDEAHGGLRPDDKLQMLQQLHMEGRKVLMLGDGVNDVPVLVAADISVAMGSATDLAKTSADAVLLSNRLDALVQAFTLARRTRRVIIENLLWAGLYNGLMLPFAALGWITPIWAAIGMSLSSLTVVINALRL 711
            RG+ T+LL+GD+    A+VA  +GIDE    + P+DK+ +++QL   G  V M+GDG+ND P L  AD+ +A+G  TD+A  +AD +L+ + LD +     LA  T R I  N++WA  YN   +P AA G + P+ A   M+ SS  VV N+LRL
Sbjct:  569 RGFRTALLTGDNPASAAAVASRIGIDEVIADILPEDKVDVIEQLRDRGHVVAMVGDGINDGPALARADLGMAIGRGTDVAIGAADIILVRDNLDVVPITLDLAAATMRTIKFNMVWAFGYNIAAIPIAAAGLLNPLVAGAAMAFSSFFVVSNSLRL 724          
BLAST of EY728935 vs. ExPASy Swiss-Prot
Match: COPA_ECO57 (Copper-exporting P-type ATPase A OS=Escherichia coli O157:H7 GN=copA PE=3 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 5.894e-28
Identity = 73/196 (37.24%), Postives = 110/196 (56.12%), Query Frame = -3
Query:  238 LLGIPGTPXAWVVXENRWRSDGPPWLPPCKARGWGTSLLSGDSSPMVASVALELGIDEAHGGLRPDDKLQMLQQLHMEGRKVLMLGDGVNDVPVLVAADISVAMGSATDLAKTSADAVLLSNRLDALVQAFTLARRTRRVIIENLLWAGLYNGLMLPFAA-LGW------ITPIWAAIGMSLSSLTVVINALRLTR 804
            LL + G   A +   +  RSD    L      G+   +L+GD+     ++A E GIDE   G+ PD K + +++L  EGR+V M+GDG+ND P L  AD+ +AMG  +D+A  +A   L+ + L  +  A  ++R T R + +NLL A +YN + +P AA + W      + P+ A   M+LSS+TVV NA RL R
Sbjct:  634 LLAVDGKAVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLR 829          
BLAST of EY728935 vs. ExPASy Swiss-Prot
Match: COPA_ENTHR (Probable copper-importing P-type ATPase A OS=Enterococcus hirae GN=copA PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.005e-27
Identity = 61/173 (35.26%), Postives = 106/173 (61.27%), Query Frame = -3
Query:  238 RSDGPPWLPPCKARGWGTSLLSGDSSPMVASVALELGIDEAH--GGLRPDDKLQMLQQLHMEGRKVLMLGDGVNDVPVLVAADISVAMGSATDLAKTSADAVLLSNRLDALVQAFTLARRTRRVIIENLLWAGLYNGLMLPFAALGWITPIWAAIGMSLSSLTVVINALRLTR 750
            + D    +   + +G    +++GD+     ++  ++GID  H    + P++K   +++L   G+KV M+GDG+ND P L  AD+ +AMGS TD+A  +AD  L+++ L ++ Q  +L+  T + I +NL WA +YN + +PFAA G++ PI A   M+ SS++V++N+L L R
Sbjct:  551 KEDAKQAIEQLQQKGVDVFMVTGDNQRAAQAIGKQVGIDSDHIFAEVLPEEKANYVEKLQKAGKKVGMVGDGINDAPALRLADVGIAMGSGTDIAMETADVTLMNSHLTSINQMISLSAATLKKIKQNLFWAFIYNTIGIPFAAFGFLNPIIAGGAMAFSSISVLLNSLSLNR 723          
BLAST of EY728935 vs. ExPASy Swiss-Prot
Match: COPA_STAHJ (Copper-exporting P-type ATPase A OS=Staphylococcus haemolyticus (strain JCSC1435) GN=copA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.313e-27
Identity = 65/155 (41.94%), Postives = 96/155 (61.94%), Query Frame = -3
Query:  235 TSLLSGDSSPMVASVALELGIDEAHGGLRPDDKLQMLQQLHMEGRKVLMLGDGVNDVPVLVAADISVAMGSATDLAKTSADAVLLSNRLDALVQAFTLARRTRRVIIENLLWAGLYNGLMLPFAALGWITPIWAAIGMSLSSLTVVINALRLTRM 699
            T +L+GD+     ++A E+GID+   G+ P+DK   + QL  +   V M+GDG+ND P LV ADI +AMG+ T++A  +AD  +L   +  + +A   + +T R I +NL WA  YN   +P AA+G + P  A   M+LSS++VV NALRL RM
Sbjct:  639 TVMLTGDNERTAKAIAKEVGIDQVIAGVLPEDKAHHITQLQEQKHNVAMVGDGINDAPALVKADIGIAMGTGTEVAIEAADITILGGDIQLVPKAIHASHKTIRNIKQNLFWAFGYNIAGIPIAAMGLLAPWIAGAAMALSSVSVVSNALRLKRM 793          
The following BLAST results are available for this feature:
BLAST of EY728935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
CTPV_MYCTU4.361e-3142.77Probable cation-transporting ATPase V OS=Mycobacte... [more]
FIXI_RHILV7.439e-3145.12Nitrogen fixation protein fixI OS=Rhizobium legumi... [more]
CTPB_MYCTU2.393e-2943.04Cation-transporting P-type ATPase B OS=Mycobacteri... [more]
CTPB_MYCBO2.393e-2943.04Cation-transporting P-type ATPase B OS=Mycobacteri... [more]
Y290_HAEIN6.963e-2943.14Probable cation-transporting ATPase HI0290 OS=Haem... [more]
CTPA_MYCTU4.513e-2841.10Cation-transporting P-type ATPase A OS=Mycobacteri... [more]
CTPA_MYCLE4.513e-2842.31Cation-transporting P-type ATPase A OS=Mycobacteri... [more]
COPA_ECO575.894e-2837.24Copper-exporting P-type ATPase A OS=Escherichia co... [more]
COPA_ENTHR1.005e-2735.26Probable copper-importing P-type ATPase A OS=Enter... [more]
COPA_STAHJ1.313e-2741.94Copper-exporting P-type ATPase A OS=Staphylococcus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-E07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728935 ID=EY728935; Name=EY728935; organism=Citrus sinensis; type=EST; length=827bp
GCGGCCAGGTGATTCGGGTCCTGGTCGTCGAACAGCACACTGTGGGCCGG
GCCATCGAGGTCGTCATACTGGCCGCTGTCCACCGCCCAGAAGAAGATGT
AAATGGCGATGGCCACAATCAACAGCGCCGCCGGGATCATCACGTAAAGA
GCTGGCATCTGCACTCCATGCCCGCGCGGCTCAAGCCGGCAGCGGACGGG
TTACGGGGGCGGCGCTCACGGCTGGCGTGCTCGGCATGCGAGTCAGGCGT
AAGGCGTTGATCACCACGGTCAACGAACTGAGGGACATGCCAATCGCCGC
CCAGATCGGGGTAATCCAGCCGAGGGCGGCAAACGGCAACATCAGGCCAT
TGTACAGCCCGGCCCACAGCAGGTTTTCAATGATTACCCGGCGAGTGCGC
CGGGCCAGGGTAAAGGCTTGTACCAGGGCGTCGAGGCGGTTCGACAGCAG
TACCGCGTCGGCACTGGTCTTGGCCAGGTCGGTGGCCGAACCCATAGCCA
CGCTGATATCGGCGGCGACCAGCACCGGCACGTCGTTGACGCCGTCACCG
AGCATCAGCACCTTGCGGCCTTCCATGTGCAACTGTTGCAGCATTTGCAG
CTTGTCGTCGGGGCGCAGGCCGCCGTGTGCTTCGTCGATGCCCAGCTCAA
GGGCGACGCTGGCGACCATTGGCGAACTGTCGCCCGACAGCAGCGAGGTG
CCCCANCCGCGGGCCTTGCAGGGCGGCAACCAAGGCGGGCCGTCGCTGCG
CCAGCGATTTTCCANAACAACCCAGGCCANGGGCGTCCCGGGGATCCCCA
ACAGGAACCATCGCCGGCTCTGTGGGG
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