EY728926

Overview
NameEY728926
Unique NameEY728926
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728926 vs. ExPASy Swiss-Prot
Match: CBR4_DANRE (Carbonyl reductase family member 4 OS=Danio rerio GN=cbr4 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.267e-14
Identity = 60/182 (32.97%), Postives = 94/182 (51.65%), Query Frame = -2
Query:    4 DVTDAASLQRLFETV----GPFDHLVYTAG---PAVQAKALIETDLNLAQDNFNVKLWGSLRAIQSALPFLAEHGSITLTSGQL-GRKAVAGQFIKTGINAATEALGKQLAKELAPR--RVNVVSPGVIDTEAYSGLSEEQRLAMFAKAGGALPVGRVGQAEEVAAGYLLAMENGFITGSVI 519
            DV+    +Q+ FET+    G    LV  AG    A+  ++  E  L++   N    L GS+   ++A+  +  HG   +  G + G K  AGQ + +   A  E   + LAKE+A R  RVN+V+PG+I T+  +GL+EE        A   +P+GR G+  EVA   L  +E+ +ITG ++
Sbjct:   57 DVSKEEEVQKAFETINKTCGTVGFLVNAAGINRDALLLRSKSEDMLSVLHTN----LLGSMLTCKAAVRNMLSHGGAIVNIGSVVGVKGNAGQCVYSASKAGLEGFTRSLAKEVASRNIRVNLVAPGLIHTDMTAGLAEE-------AAVRTIPLGRFGEPAEVAQAMLFLLESPYITGQIL 227          
BLAST of EY728926 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.216e-12
Identity = 59/180 (32.78%), Postives = 87/180 (48.33%), Query Frame = -2
Query:    4 DVTDAASLQRLFETV----GPFDHLVYTAGPAVQAKALIETDLNLAQDNFNVKLWGSLRAIQSALPFLAEH--GSITLTSGQLGRKAVAGQFIKTGINAATEALGKQLAKELAPR--RVNVVSPGVIDTEAYSGLSEEQRLAMFAKAGGALPVGRVGQAEEVAAGYLLAMENGFITGSVI 519
            DV+    +Q  F+ +    G  D+LV +AG +  A  L+ T         ++ L G+++  + AL  + +   GSI      +G K   GQ I            K LAKE+A R  RVNVV+PG I T+  S L E+    M       +P+GR G+ EEVA   L  +E+ +ITG V+
Sbjct:   55 DVSKENEIQCTFKEIKNNLGNIDYLVNSAGISRDA-LLLRTRSEDIMSLLSINLVGTIQTCKVALKGMIQQQGGSIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDMTSDLKEDSLNKM-------IPLGRFGEPEEVAQSVLFLLESPYITGHVL 226          
BLAST of EY728926 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12
Identity = 59/180 (32.78%), Postives = 86/180 (47.78%), Query Frame = -2
Query:    4 DVTDAASLQRLFETV----GPFDHLVYTAGPAVQAKALIETDLNLAQDNFNVKLWGSLRAIQSALPFLAEH--GSITLTSGQLGRKAVAGQFIKTGINAATEALGKQLAKELAPR--RVNVVSPGVIDTEAYSGLSEEQRLAMFAKAGGALPVGRVGQAEEVAAGYLLAMENGFITGSVI 519
            DV+    +Q  F+ +    G  D+LV +AG    A  L+ T     +   +V L G+++  + AL  + +   G+I      +G K   GQ I            K LAKE+A R  RVNVV+PG I T+   GL E+    M       +P+GR G  EEVA   L  +E+ +ITG V+
Sbjct:   55 DVSKENEIQDTFKEITNNLGNVDYLVNSAGIRRDA-LLLRTRSEDIRSLLSVNLVGTIQTCKLALRSMIQQQGGAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIHTDMTLGLEEDSLTKM-------VPLGRFGDPEEVAQSVLFLLESPYITGHVL 226          
BLAST of EY728926 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium smegmatis GN=fabG PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 9.836e-11
Identity = 69/222 (31.08%), Postives = 99/222 (44.59%), Query Frame = -2
Query:    4 LAVARHCAAWPTGRARGAHVVLAGRRLSSTVENGVRSEQVDVTDAASLQRLFETV----GPFDHLVYTAGPAVQAKALIETDLNLAQDNFNVKLWGSLRAIQSALPFLAEH--GSITLTSGQLGRKAVAGQFIKTGINAATEALGKQLAKELAPRRV--NVVSPGVIDTEAYSGLSEEQRLAMFAKAGGALPVGRVGQAEEV--AAGYLLAMENGFITGSVI 639
            LA+AR  AA         H V    R S   ++ +   Q DVTD+A++ R F+ V    GP + LV  AG +  A  +  T+    ++  N  L G+ R  Q A   +     G I       G   +  Q       A    + + +++ELA   V  NVV+PG IDTE    L E     + A A   +P  RVG AEEV  A  +L + +  +I G+VI
Sbjct:   37 LAIARRLAA-------DGHKVAVTHRGSGAPDD-LFGVQCDVTDSAAVDRAFKEVEEHQGPVEVLVANAGISKDAFLMRMTEERF-EEVINTNLTGAFRCAQRASRTMQRKRFGRIIFIGSVSGMWGIGNQANYAAAKAGLIGMARSISRELAKAGVTANVVAPGYIDTEMTRALDER----IQAGALDFIPAKRVGTAEEVAGAVSFLASEDASYIAGAVI 245          
The following BLAST results are available for this feature:
BLAST of EY728926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CBR4_DANRE3.267e-1432.97Carbonyl reductase family member 4 OS=Danio rerio ... [more]
CBR4_XENLA5.216e-1232.78Carbonyl reductase family member 4 OS=Xenopus laev... [more]
CBR4_XENTR8.897e-1232.78Carbonyl reductase family member 4 OS=Xenopus trop... [more]
FABG_MYCS29.836e-1131.083-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-D09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728926 ID=EY728926; Name=EY728926; organism=Citrus sinensis; type=EST; length=661bp
ATCAATCACGCTGCCAGTGATAAACCCGTTCTCCATCGCCAGCAGGTACC
CGGCAGCCACTTCTTCGGCCTGCCCCACTCGCCCCACCGGCAATGCCCCG
CCCGCCTTGGCAAACATTGCCAGTCGCTGCTCCTCGGATAAGCCCGAATA
CGCCTCGGTATCGATCACCCCAGGACTCACCACATTGACCCTGCGTGGCG
CCAGTTCCTTGGCCAGTTGCTTGCCCAGCGCTTCAGTGGCCGCATTGATC
CCGGTCTTGATGAATTGCCCTGCAACCGCTTTGCGCCCCAACTGTCCCGA
CGTCAGGGTGATGCTGCCGTGCTCGGCGAGAAAGGGCAGCGCCGACTGGA
TCGCCCGCAGCGAACCCCAGAGTTTTACGTTGAAGTTGTCTTGCGCCAGG
TTCAGGTCCGTCTCGATCAATGCCTTCGCCTGTACCGCAGGGCCTGCGGT
ATAGACCAGATGATCAAACGGCCCCACCGTTTCGAACAACCGCTGCAACG
AGGCCGCGTCGGTCACGTCTACCTGCTCGCTGCGCACACCGTTCTCCACG
GTTGAAGACAAGCGTCGCCCGGCCAGCACCACGTGGGCGCCGCGTGCACG
GCCTGTTGGCCACGCGGCACAATGCCGTGCTACTGCGAGACATGATGGTA
GTCCTGGGGGG
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