EY728911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728911 vs. ExPASy Swiss-Prot
Match: SKI2_YEAST (Antiviral helicase SKI2 OS=Saccharomyces cerevisiae GN=SKI2 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.143e-14 Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = 2 Query: 371 KWQRVEKLCNEVKEFGNEMIDVDELASIYDFRIDKFQRSSIEAFFRGSSVVVSAPTSSGKTLIXXXXXXXXXXKTRRLFYXTPLKALSNQKVREFRETFGDNNVGLLTGDPAI 709 +W V L ++++ F +E+I A + F +D FQ+ ++ +G SV V+A TS+GKT++ + Y +P+KALSNQK R+F+ETF D N+GL+TGD I Sbjct: 301 EWAHVVDLNHKIENF-DELIP--NPARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIKALSNQKFRDFKETFDDVNIGLITGDVQI 410
BLAST of EY728911 vs. ExPASy Swiss-Prot
Match: YE02_SCHPO (Uncharacterized helicase C17H9.02 OS=Schizosaccharomyces pombe GN=SPAC17H9.02 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.475e-13 Identity = 43/97 (44.33%), Postives = 58/97 (59.79%), Query Frame = 2 Query: 419 NEMIDVDELASIYDFRIDKFQRSSIEAFFRGSSVVVSAPTSSGKTLIXXXXXXXXXXKTRRLFYXTPLKALSNQKVREFRETFGDNNVGLLTGDPAI 709 N+ I D A Y F +D FQ ++I+ R SV+VSA TS+GKT+I +R+ Y +P+K+LSNQK RE FGD VGL+TGD +I Sbjct: 110 NKHIPSDPPAKTYPFELDPFQSTAIKCVERMESVLVSAHTSAGKTVIAEYAIAQALKNRQRVIYTSPIKSLSNQKYRELLSEFGD--VGLMTGDVSI 204
BLAST of EY728911 vs. ExPASy Swiss-Prot
Match: MTR4_YEAST (ATP-dependent RNA helicase DOB1 OS=Saccharomyces cerevisiae GN=MTR4 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.741e-13 Identity = 41/88 (46.59%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 446 ASIYDFRIDKFQRSSIEAFFRGSSVVVSAPTSSGKTLIXXXXXXXXXXKTRRLFYXTPLKALSNQKVREFRETFGDNNVGLLTGDPAI 709 A Y F +D FQ ++I RG SV+VSA TS+GKT++ +R+ Y +P+KALSNQK RE FGD VGL+TGD I Sbjct: 143 ARTYPFTLDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGD--VGLMTGDITI 228
BLAST of EY728911 vs. ExPASy Swiss-Prot
Match: HELY_MYCLE (Probable helicase helY OS=Mycobacterium leprae GN=helY PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.252e-12 Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 2 Query: 425 MIDVDELASI---YDFRIDKFQRSSIEAFFRGSSVVVSAPTSSGKTLIXXXXXXXXXXKTRRLFYXTPLKALSNQKVREFRETFGDNNVGLLTGDPAI 709 M D+ ELA F +D FQ+ + A RG V+V APT +GKT++ + FY TPLKALSNQK + +G N +GLLTGD ++ Sbjct: 1 MTDLAELARFTAELPFSLDDFQQRACAALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGGKCFYTTPLKALSNQKYTDLTARYGRNRIGLLTGDQSV 98
BLAST of EY728911 vs. ExPASy Swiss-Prot
Match: HELY_MYCTU (Probable helicase helY OS=Mycobacterium tuberculosis GN=helY PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.941e-12 Identity = 36/96 (37.50%), Postives = 54/96 (56.25%), Query Frame = 2 Query: 422 EMIDVDELASIYDFRIDKFQRSSIEAFFRGSSVVVSAPTSSGKTLIXXXXXXXXXXKTRRLFYXTPLKALSNQKVREFRETFGDNNVGLLTGDPAI 709 E+ ++D + F +D FQ+ + A RG V+V APT +GKT++ + FY TPLKALSNQK + +G + +GLLTGD ++ Sbjct: 3 ELAELDRFTAELPFSLDDFQQRACSALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGSKCFYTTPLKALSNQKHTDLTARYGRDQIGLLTGDLSV 98
BLAST of EY728911 vs. ExPASy Swiss-Prot
Match: MTR4_CAEEL (mRNA transport homolog 4 OS=Caenorhabditis elegans GN=mtr-4 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.842e-12 Identity = 39/87 (44.83%), Postives = 53/87 (60.92%), Query Frame = 2 Query: 440 ELASIYDFRIDKFQRSSIEAFFRGSSVVVSAPTSSGKTLIXXXXXXXXXXKTRRLFYXTPLKALSNQKVREFRETFGDNNVGLLTGD 700 E A Y F++D FQ+ +I SV+VSA TS+GKT++ + +R+ Y +P+KALSNQK RE E F D VGL+TGD Sbjct: 117 EPAKYYPFQLDAFQKQAILCIDNNQSVLVSAHTSAGKTVVATYAIAKCLREKQRVIYTSPIKALSNQKYRELEEEFKD--VGLMTGD 201
BLAST of EY728911 vs. ExPASy Swiss-Prot
Match: YDVG_SCHPO (Uncharacterized helicase C6F12.16c OS=Schizosaccharomyces pombe GN=SPAC6F12.16c PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.553e-12 Identity = 41/88 (46.59%), Postives = 51/88 (57.95%), Query Frame = 2 Query: 446 ASIYDFRIDKFQRSSIEAFFRGSSVVVSAPTSSGKTLIXXXXXXXXXXKTRRLFYXTPLKALSNQKVREFRETFGDNNVGLLTGDPAI 709 A Y F +D FQ SI R SV+VSA TS+GKT++ +R+ Y +P+KALSNQK RE FGD VGL+TGD I Sbjct: 192 ARTYPFTLDPFQAVSIACIERQESVLVSAHTSAGKTVVAEYAVAQSLRDKQRVIYTSPIKALSNQKYRELLAEFGD--VGLMTGDVTI 277
BLAST of EY728911 vs. ExPASy Swiss-Prot
Match: SK2L2_MOUSE (Superkiller viralicidic activity 2-like 2 OS=Mus musculus GN=Skiv2l2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.907e-11 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 2 Query: 434 VDELASIYDFRIDKFQRSSIEAFFRGSSVVVSAPTSSGKTLIXXXXXXXXXXKTRRLFYXTPLKALSNQKVREFRETFGDNNVGLLTGDPAI 709 V + A Y F +D FQR +I+ SV+VSA TS+GKT+ + +R+ + +P+KALSNQK RE E F D VGL+TGD I Sbjct: 127 VGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQD--VGLMTGDVTI 216
BLAST of EY728911 vs. ExPASy Swiss-Prot
Match: SK2L2_HUMAN (Superkiller viralicidic activity 2-like 2 OS=Homo sapiens GN=SKIV2L2 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.907e-11 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 2 Query: 434 VDELASIYDFRIDKFQRSSIEAFFRGSSVVVSAPTSSGKTLIXXXXXXXXXXKTRRLFYXTPLKALSNQKVREFRETFGDNNVGLLTGDPAI 709 V + A Y F +D FQR +I+ SV+VSA TS+GKT+ + +R+ + +P+KALSNQK RE E F D VGL+TGD I Sbjct: 129 VGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQD--VGLMTGDVTI 218
BLAST of EY728911 vs. ExPASy Swiss-Prot
Match: SKIV2_HUMAN (Helicase SKI2W OS=Homo sapiens GN=SKIV2L PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.247e-11 Identity = 39/80 (48.75%), Postives = 48/80 (60.00%), Query Frame = 2 Query: 461 FRIDKFQRSSIEAFFRGSSVVVSAPTSSGKTLIXXXXXXXXXXKTRRLFYXTPLKALSNQKVREFRETFGDNNVGLLTGD 700 F D FQ+ +I R SV V+A TS+GKT++ R Y +P+KALSNQK R+FR TFGD VGLLTGD Sbjct: 309 FEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGD--VGLLTGD 386 The following BLAST results are available for this feature:
BLAST of EY728911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728911 ID=EY728911; Name=EY728911; organism=Citrus sinensis; type=EST; length=749bpback to top |