EY728891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728891 vs. ExPASy Swiss-Prot
Match: SPD2_ARATH (Spermidine synthase 2 OS=Arabidopsis thaliana GN=SPDSYN2 PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 3.050e-43 Identity = 65/104 (62.50%), Postives = 78/104 (75.00%), Query Frame = 1 Query: 337 MAETGSAAATDFPLKRPRDDGEKEANNNNNGSVLMEMDSN----KQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYXNVMVFQSSHTGKGLILDG 636 M+ T A+ TD P+KRPR EA +NNG ME ++ K+P C+SS+IPGWFSEISPMWPGEAHSLKVEKILFQGKSDY +V+VFQS+ GK L+LDG Sbjct: 1 MSSTQEASVTDLPVKRPR-----EAEEDNNGGA-METENGGGEIKEPSCMSSIIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVIVFQSATYGKVLVLDG 98 HSP 2 Score: 70.4774 bits (171), Expect = 3.050e-43 Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 2 Query: 614 GRVLFWMGVIXLTEKDECAYQEMITHLPLCSIPNPKKGLVIG 739 G+VL GVI LTE+DECAYQEMITHLPLCSI NPKK LVIG Sbjct: 91 GKVLVLDGVIQLTERDECAYQEMITHLPLCSISNPKKVLVIG 132
BLAST of EY728891 vs. ExPASy Swiss-Prot
Match: SPD1_ARATH (Spermidine synthase 1 OS=Arabidopsis thaliana GN=SPDSYN1 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.031e-40 Identity = 59/96 (61.46%), Postives = 73/96 (76.04%), Query Frame = 1 Query: 358 AATDFPLKRPRDDGEKEANNNNNGSVLMEM---DSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYXNVMVFQSSHTGKGLILDG 636 +ATD LKRPR++ ++N G+ ME D K+P C S+VIPGWFSE+SPMWPGEAHSLKVEK+LFQGKSDY +V+VFQS+ GK L+LDG Sbjct: 7 SATD--LKRPREE------DDNGGAATMETENGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDG 94 HSP 2 Score: 73.559 bits (179), Expect = 1.031e-40 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 2 Query: 614 GRVLFWMGVIXLTEKDECAYQEMITHLPLCSIPNPKKGLVIG 739 G+VL GVI LTE+DECAYQEMITHLPLCSIPNPKK LVIG Sbjct: 87 GKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIG 128
BLAST of EY728891 vs. ExPASy Swiss-Prot
Match: SPDE_SOLLC (Spermidine synthase OS=Solanum lycopersicum GN=SPDSYN PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.668e-25 Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 1 Query: 364 TDFPLKRPRDD-GEKE---ANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYXNVMVFQSSHTGKGLILDG 636 T+ P+KRPR++ E E ANN+NNG + + ISSV+PGWFSEISP+WPGEAHSLKVEKILFQGKSDY NV+VFQSS GK L+LDG Sbjct: 12 TELPVKRPREEEAETEMEAANNSNNGC-----EKEESSPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVLVFQSSTYGKVLVLDG 101 HSP 2 Score: 74.3294 bits (181), Expect = 9.495e-13 Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 542 RLRKSCFRGSLITXMSWSFSLHIRGRVLFWMGVIXLTEKDECAYQEMITHLPLCSIPNPKKGLVIG 739 ++ K F+G F G+VL GVI LTE+DECAYQEMITHLPLCSIPNPKK LVIG Sbjct: 70 KVEKILFQGKSDYQNVLVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIG 135
BLAST of EY728891 vs. ExPASy Swiss-Prot
Match: SPD1_PEA (Spermidine synthase 1 OS=Pisum sativum GN=SPDSYN1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.845e-24 Identity = 60/92 (65.22%), Postives = 69/92 (75.00%), Query Frame = 1 Query: 361 ATDFPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYXNVMVFQSSHTGKGLILDG 636 +TD PLKR R+D E N ++ + QP+ +SSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDY +VMVFQS+ GK LILDG Sbjct: 10 STDSPLKRQRED---EVNGVSD-----TLSKEPQPNGLSSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVMVFQSATYGKVLILDG 93 HSP 2 Score: 74.3294 bits (181), Expect = 9.495e-13 Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 542 RLRKSCFRGSLITXMSWSFSLHIRGRVLFWMGVIXLTEKDECAYQEMITHLPLCSIPNPKKGLVIG 739 ++ K F+G F G+VL GVI LTE+DECAYQEMITHLPLCSIPNPKK LVIG Sbjct: 62 KVEKILFQGKSDYQDVMVFQSATYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIG 127
BLAST of EY728891 vs. ExPASy Swiss-Prot
Match: SPD2_DATST (Spermidine synthase 2 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.146e-24 Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 412 NNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYXNVMVFQSSHTGKGLILDG 636 NNNNNG ++K+ CISSV+PGWFSEISP+WPGEAHSLKVEKILFQGKSDY +VMVFQS+ GK L+LDG Sbjct: 7 NNNNNGCT-----NDKESPCISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQDVMVFQSTTYGKVLVLDG 76 HSP 2 Score: 73.9442 bits (180), Expect = 1.240e-12 Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 542 RLRKSCFRGSLITXMSWSFSLHIRGRVLFWMGVIXLTEKDECAYQEMITHLPLCSIPNPKKGLVIG 739 ++ K F+G F G+VL GVI LTE+DECAYQEMITHLPLCSIPNPKK LVIG Sbjct: 45 KVEKILFQGKSDYQDVMVFQSTTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIG 110
BLAST of EY728891 vs. ExPASy Swiss-Prot
Match: SPDE_NICSY (Spermidine synthase OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.479e-23 Identity = 56/76 (73.68%), Postives = 62/76 (81.58%), Query Frame = 1 Query: 409 ANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYXNVMVFQSSHTGKGLILDG 636 AN+NNNG +N+ P ISSV+PGWFSEISP+WPGEAHSLKVEKILFQGKSDY NVMVFQSS GK L+LDG Sbjct: 4 ANHNNNGC------TNESP-YISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDG 72 HSP 2 Score: 72.7886 bits (177), Expect = 2.763e-12 Identity = 38/66 (57.58%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 542 RLRKSCFRGSLITXMSWSFSLHIRGRVLFWMGVIXLTEKDECAYQEMITHLPLCSIPNPKKGLVIG 739 ++ K F+G F G+VL GVI LTE+DECAYQEMI HLPLCSIPNPKK LVIG Sbjct: 41 KVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMIAHLPLCSIPNPKKVLVIG 106
BLAST of EY728891 vs. ExPASy Swiss-Prot
Match: SPD1_DATST (Spermidine synthase 1 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.934e-23 Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 1 Query: 439 MEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYXNVMVFQSSHTGKGLILDG 636 ME +NK+ ISS++PGWFSEISP+WPGEAHSLKVEKILFQGKSDY NVMVFQSS GK LILDG Sbjct: 1 MEEANNKESPYISSILPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDG 66 HSP 2 Score: 75.0998 bits (183), Expect = 5.567e-13 Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 542 RLRKSCFRGSLITXMSWSFSLHIRGRVLFWMGVIXLTEKDECAYQEMITHLPLCSIPNPKKGLVIG 739 ++ K F+G F G+VL GVI LTE+DECAYQEMITHLPLCSIPNPKK LVIG Sbjct: 35 KVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIG 100
BLAST of EY728891 vs. ExPASy Swiss-Prot
Match: SPDE_COFAR (Spermidine synthase OS=Coffea arabica PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.012e-22 Identity = 51/58 (87.93%), Postives = 53/58 (91.38%), Query Frame = 1 Query: 463 PDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYXNVMVFQSSHTGKGLILDG 636 PD +SSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDY NVMVFQSS GK L+LDG Sbjct: 17 PDGVSSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDG 74 HSP 2 Score: 70.8626 bits (172), Expect = 1.050e-11 Identity = 37/66 (56.06%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 542 RLRKSCFRGSLITXMSWSFSLHIRGRVLFWMGVIXLTEKDECAYQEMITHLPLCSIPNPKKGLVIG 739 ++ K F+G F G+VL GVI LTE+DECAYQEMI HLPLCSIP+PKK LVIG Sbjct: 43 KVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMIAHLPLCSIPSPKKVLVIG 108
BLAST of EY728891 vs. ExPASy Swiss-Prot
Match: SPD2_PEA (Spermidine synthase 2 OS=Pisum sativum GN=SPDSYN2 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.012e-22 Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 1 Query: 352 SAAATDFPLKRPRDDGEKEANNNNNGSVLMEMDS-NKQP--DCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYXNVMVFQSSHTGKGLILDG 636 S + +K RDD EK +N + +V M+++ +K P + +SSVIPGWFSEISPMWPGEAHSLK+EKILFQGKS+Y VMVFQSS GK L+LDG Sbjct: 5 STVELESSMKEHRDDDEK-SNGFSVSAVSMDVEGGDKDPSGNGVSSVIPGWFSEISPMWPGEAHSLKIEKILFQGKSEYQKVMVFQSSTYGKVLVLDG 101 HSP 2 Score: 75.485 bits (184), Expect = 4.262e-13 Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 542 RLRKSCFRGSLITXMSWSFSLHIRGRVLFWMGVIXLTEKDECAYQEMITHLPLCSIPNPKKGLVIG 739 ++ K F+G F G+VL GVI LTE+DECAYQEMITHLPLCSIPNPKK LVIG Sbjct: 70 KIEKILFQGKSEYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIG 135
BLAST of EY728891 vs. ExPASy Swiss-Prot
Match: SPD1_HYONI (Spermidine synthase 1 OS=Hyoscyamus niger PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.726e-22 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 406 EANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYXNVMVFQSSHTGKGLILDG 636 E N +NG ++ K+ ISSV+PGWFSEISP+WPGEAHSLKVEKILFQGKSDY NVMVFQSS GK L+LDG Sbjct: 2 EVTNQSNGC----SNNEKESPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDG 74 HSP 2 Score: 74.7146 bits (182), Expect = 7.270e-13 Identity = 39/66 (59.09%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 542 RLRKSCFRGSLITXMSWSFSLHIRGRVLFWMGVIXLTEKDECAYQEMITHLPLCSIPNPKKGLVIG 739 ++ K F+G F G+VL GVI LTE+DECAYQEMITHLPLCSIPNPKK LVIG Sbjct: 43 KVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIG 108 The following BLAST results are available for this feature:
BLAST of EY728891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728891 ID=EY728891; Name=EY728891; organism=Citrus sinensis; type=EST; length=851bpback to top |