EY728807
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728807 vs. ExPASy Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 3.053e-49 Identity = 103/182 (56.59%), Postives = 122/182 (67.03%), Query Frame = 2 Query: 83 PKFSTATKGNHFGLSGNKSLAAVSSNSMYWPNRAQNVTESFAPIVNKECSEKRQGNGNTCRLFGIQLVDNSNVEEASPAFTMSGAMGDDRAIPCLDADSDQHSEPSNINRSDVPSVSCDA*KSCLRSPQESQSRHIRICTKVHMQGIAFGMAVDLTPFDCHEHLLKKLEDMFDIDGHLCGST 628 P FS K FG GNKS VS S +WP A + ESFA N E +EK+Q NGN CRLFG +LV+N NV+E A ++SGA+ D+ +P + DS Q SEP NIN+SD+PS S D KS LRSPQESQSR IR CTKVHMQG A G A+DLT +C+E L KKLE+MFDI G L ST Sbjct: 407 PLFSPPAKAATFGHGGNKSFG-VSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLEST 587
BLAST of EY728807 vs. ExPASy Swiss-Prot
Match: ARFI_ORYSJ (Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.785e-32 Identity = 85/198 (42.93%), Postives = 120/198 (60.61%), Query Frame = 2 Query: 29 SSAFSYCDSPQGRDLYPSPKFSTATKGNHFGLSGNKSLAAVSSNSMYWPNRAQNVTESFAPIVNKECSEKRQGNGNT-CRLFGIQLVDNSNVEEASPAFTMSGAMGDDRAIPCLDADSDQHSEPSNINRSDVPSVSCDA*KSCLRSPQESQSRHIRICTKVHMQGIAFGMAVDLTPFDCHEHLLKKLEDMFDIDGHLC 619 + S+ + + R+++PS S + +H + +K+ ++ SN YW R + T+SF+ NK E++Q CRLFGI++ +S VEEA PA T+SG +G D+ + +D DSDQ S+PSN N+SD P S + RSP ESQSR +R CTKV MQG+A G AVDLT + + L KLE+MFDI G LC Sbjct: 403 AQTLSFSEPQRAREIFPSIPASIFSASSHVEFN-SKNEPSILSNQFYWSMR-DSKTDSFSASTNKTRVERKQEPTTMGCRLFGIEI--SSAVEEALPAATVSG-VGYDQTVLSVDVDSDQISQPSNGNKSDAPGTSSE------RSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLC 589
BLAST of EY728807 vs. ExPASy Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.861e-30 Identity = 88/209 (42.11%), Postives = 124/209 (59.33%), Query Frame = 2 Query: 14 KSHVESS-AFSYCDSPQGRDLYPS---PKFSTATKGNHFGLSGNKSLAAVSSNSMYWPNRAQNVTESFAPIVNKECSEKRQGNGNT-CRLFGIQLVDNSNVEEASPAFTMSGAMGDDRAIPCLDADSDQHSEPSNINRSDVPSVSCDA*KSCLRSPQESQSRHIRICTKVHMQGIAFGMAVDLTPFDCHEHLLKKLEDMFDIDGHLCGS 625 KS ES+ FS+ + ++LYPS P FST+ + G S +A+S+ YWP R + S++ ++K SEK+Q + CRLFGI++ +S VE SP +SG +G D+ +DA+SDQ S+PS+ N+SD P+ S + SP E+QSR +R CTKV MQG+A G AVDLT ++ L KLE+MFDI G L S Sbjct: 397 KSSAESTQGFSFSGLQRTQELYPSSPNPIFSTSL---NVGFSTKNEPSALSNKHFYWPMR-ETRANSYSASISKVPSEKKQEPSSAGCRLFGIEI--SSAVEATSPLAAVSG-VGQDQPAASVDAESDQLSQPSHANKSDAPAASSEP------SPHETQSRQVRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSAS 592 The following BLAST results are available for this feature:
BLAST of EY728807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728807 ID=EY728807; Name=EY728807; organism=Citrus sinensis; type=EST; length=756bpback to top |