EY728792

Overview
NameEY728792
Unique NameEY728792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11783 contig Csv1_Contig11783:1..269. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
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BLAST of EY728792 vs. ExPASy Swiss-Prot
Match: YGCS_ECOLI (Inner membrane metabolite transport protein ygcS OS=Escherichia coli (strain K12) GN=ygcS PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.242e-13
Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = -3 
Query:    1 IKXDDLPIGRFHX*IAGXTFGAHFTDGYIXGLIGXAFTXLSPQMHLDAFWQG*SGASALIGLFM 192
            ++ DDLP+ RFH  IA  TFGAH TDGY+ G+IG A   L+P M L  F  G  G SAL+GLF+
Sbjct:    6 VRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFL 69
The following BLAST results are available for this feature:
BLAST of EY728792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YGCS_ECOLI1.242e-1354.69Inner membrane metabolite transport protein ygcS O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-F08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728792 ID=EY728792; Name=EY728792; organism=Citrus sinensis; type=EST; length=269bp
CATAAACAGCCCGATCAGGGCCGAAGCGCCNGATCAGCCTTGCCAGAAGG
CGTCCAAGTGCATCTGTGGGCTGAGCANGGTGAAGGCNATGCCGATCAGG
CCGANGATATANCCGTCGGTGAAGTGCGCGCCGAAGGTCANGCCGGCGAT
TTAANGGTGGAAGCGACCGATGGGCAGGTCGTCNATCTTGATGGATGGGG
GTGGCATGGTGTNCTCCATATNTTTGTTTTGGAGGGAGTAACACGGGCCA
CCCGATGGGGATTGTGGGC
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