EY728767

Overview
NameEY728767
Unique NameEY728767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728767 vs. ExPASy Swiss-Prot
Match: PDI_HORVU (Protein disulfide-isomerase OS=Hordeum vulgare GN=PDI PE=1 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 1.165e-11
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 1
Query:  103 SKVDA--DKYSRLASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAP 261
            +KVDA  +K   LA K E+  FPTLKIF +G  +  EY GPR+AE +V YLKK V P
Sbjct:   94 AKVDANDEKNKPLAGKYEVQGFPTLKIFRNGGKSIQEYKGPREAEGIVEYLKKQVGP 150          

HSP 2 Score: 38.1206 bits (87), Expect = 1.165e-11
Identity = 16/29 (55.17%), Postives = 22/29 (75.86%), Query Frame = 2
Query:   23 CGHCKRLAPQLDEAAPILAKLKEPIVIAK 109
            CGHCK LAP+ ++AA +L+K    IV+AK
Sbjct:   67 CGHCKSLAPEYEKAAQLLSKHDPAIVLAK 95          
BLAST of EY728767 vs. ExPASy Swiss-Prot
Match: PDI_MEDSA (Protein disulfide-isomerase OS=Medicago sativa GN=PDI PE=2 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 1.513e-11
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 1
Query:  103 SKVDADKYSR--LASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFV 306
            +KVDA++     LAS+ ++  FPT+KIF +G     EY GPR+AE +V YLKK   P  + + S  + + FV
Sbjct:   89 AKVDANEEHNKDLASENDVKGFPTIKIFRNGGKNIQEYKGPREAEGIVEYLKKQSGPASTEIKSADDATAFV 160          

HSP 2 Score: 41.2022 bits (95), Expect = 1.513e-11
Identity = 16/29 (55.17%), Postives = 24/29 (82.76%), Query Frame = 2
Query:   23 CGHCKRLAPQLDEAAPILAKLKEPIVIAK 109
            CGHCK+LAP+ ++AA IL+  + P+V+AK
Sbjct:   62 CGHCKKLAPEYEKAASILSTHEPPVVLAK 90          
BLAST of EY728767 vs. ExPASy Swiss-Prot
Match: PDI_WHEAT (Protein disulfide-isomerase OS=Triticum aestivum GN=PDI PE=2 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 2.548e-11
Identity = 31/57 (54.39%), Postives = 36/57 (63.16%), Query Frame = 1
Query:  103 SKVDA--DKYSRLASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAP 261
            +KVDA  +K   LA K E+  FPTLKIF  G     EY GPR+AE +V YLKK V P
Sbjct:   95 AKVDANDEKNKPLAGKYEVQGFPTLKIFRSGGKNIQEYKGPREAEGIVEYLKKQVGP 151          

HSP 2 Score: 38.1206 bits (87), Expect = 2.548e-11
Identity = 16/29 (55.17%), Postives = 22/29 (75.86%), Query Frame = 2
Query:   23 CGHCKRLAPQLDEAAPILAKLKEPIVIAK 109
            CGHCK LAP+ ++AA +L+K    IV+AK
Sbjct:   68 CGHCKSLAPEYEKAAQLLSKHDPAIVLAK 96          
BLAST of EY728767 vs. ExPASy Swiss-Prot
Match: PDI_MAIZE (Protein disulfide-isomerase OS=Zea mays GN=PDI PE=2 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 5.574e-11
Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 1
Query:  103 SKVDA--DKYSRLASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVEN 312
            +KVDA  +K   LA+K EI  FPT+KIF        EY GPR+A+ +V YLKK V P    + S  + +  +++
Sbjct:   90 AKVDANEEKNRPLATKYEIQGFPTIKIFRDRGKNIQEYKGPREADGIVDYLKKQVGPASKEIKSPEDATALIDD 163          

HSP 2 Score: 40.817 bits (94), Expect = 5.574e-11
Identity = 17/29 (58.62%), Postives = 22/29 (75.86%), Query Frame = 2
Query:   23 CGHCKRLAPQLDEAAPILAKLKEPIVIAK 109
            CGHCK+LAP+ + AA  L+K   PIV+AK
Sbjct:   63 CGHCKKLAPEYENAAKALSKHDPPIVLAK 91          
BLAST of EY728767 vs. ExPASy Swiss-Prot
Match: PDIA1_BOVIN (Protein disulfide-isomerase OS=Bos taurus GN=P4HB PE=1 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 5.841e-11
Identity = 27/74 (36.49%), Postives = 41/74 (55.41%), Query Frame = 1
Query:  103 SKVDADKYSRLASKQEIDAFPTLKIFMHG---IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENA 315
            +KVDA + S LA +  +  +PT+K F +G    P EY   R+A+ +V +LKK   P  S L+  A     VE++
Sbjct:   82 AKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWLKKRTGPAASTLSDGAAAEALVESS 155          

HSP 2 Score: 32.3426 bits (72), Expect = 5.841e-11
Identity = 32/130 (24.62%), Postives = 51/130 (39.23%), Query Frame = 2
Query:  323 SEDTMVLYDFDKVPALVALQPSYNEHNIFYGPFDEEFLEEFIKQNFLPLSVPINQDTL-NLLKDDKRKIVLAIVEDETEEKSQKWVTTLKAAASCNRDLVFCYVGD*QFADFADT-----FEGHKKSKLP 694
            + D    Y  DK   +V  +      N F G   +E L +FIK N LPL +   + T   +   + +  +L  +     +   K     KAA S    ++F ++     +D  D      F G KK + P
Sbjct:  191 NSDVFSKYQLDK-DGVVLFKKFDEGRNNFEGEVTKEKLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYEGKLSNFKKAAESFKGKILFIFID----SDHTDNQRILEFFGLKKEECP 315          

HSP 3 Score: 28.4906 bits (62), Expect = 5.841e-11
Identity = 14/29 (48.28%), Postives = 17/29 (58.62%), Query Frame = 2
Query:   23 CGHCKRLAPQLDEAAPILAKLKEPIVIAK 109
            CGHCK LAP+  +AA  L      I +AK
Sbjct:   55 CGHCKALAPEYAKAAGKLKAEGSEIRLAK 83          
The following BLAST results are available for this feature:
BLAST of EY728767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PDI_HORVU1.165e-1154.39Protein disulfide-isomerase OS=Hordeum vulgare GN=... [more]
PDI_MEDSA1.513e-1141.67Protein disulfide-isomerase OS=Medicago sativa GN=... [more]
PDI_WHEAT2.548e-1154.39Protein disulfide-isomerase OS=Triticum aestivum G... [more]
PDI_MAIZE5.574e-1140.54Protein disulfide-isomerase OS=Zea mays GN=PDI PE=... [more]
PDIA1_BOVIN5.841e-1136.49Protein disulfide-isomerase OS=Bos taurus GN=P4HB ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728767 ID=EY728767; Name=EY728767; organism=Citrus sinensis; type=EST; length=842bp
CCACGCGTCCGCGCTCCTTGGGTGCGGCCACTGCAAGCGCCTCGCTCCTC
AGTTAGACGAAGCTGCTCCGATACTTGCTAAATTGAAAGAGCCAATTGTA
ATAGCAAAGTAGACGCTGACAAGTACAGCCGTCTTGCTAGTAAGCAAGAG
ATTGATGCATTTCCTACATTGAAGATATTTATGCATGGGATTCCTACGGA
ATATTATGGACCTAGAAAAGCAGAATTGCTTGTCCGTTATCTTAAGAAAT
TTGTTGCCCCTGATGTCTCCATTCTTAATTCAGATGCGGAAGTTTCTGAC
TTTGTTGAAAATGCTGGATTTCTCTGAGGACACCATGGTGTTGTATGATT
TTGACAAAGTTCCGGCTTTGGTTGCTCTTCAGCCGAGTTACAATGAGCAC
AACATTTTTTATGGCCCCTTTGATGAGGAGTTTTTGGAGGAGTTTATAAA
ACAAAATTTCCTTCCTCTGTCTGTGCCTATTAACCAAGACACACTGAATC
TTTTGAAAGATGATAAAAGGAAAATTGTCCTTGCCATTGTGGAGGATGAG
ACTGAGGAGAAGTCGCAGAAATGGGTCACAACACTGAAGGCTGCTGCATC
NTGCAATCGTGACTTAGTTTTTTGCTATGTTGGGGATTAACAGTTTGCAG
ACTTTGCGGATACATTTGAGGGCCATAAGAAGTCAAAATTGCCAAGATGG
TGGTTTGGGATGTCGACATAAAAATTACCTACTGTTATTGGTTCAGAAAG
CCTTGATGAGGAGGATCCGGGTTCCCAATATCGCGTTTCTTGAAAGGATA
TGAAAAGGATGGACCGACCNAAAAAGGTGCTGGTCCTGCNTA
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