EY728766

Overview
NameEY728766
Unique NameEY728766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728766 vs. ExPASy Swiss-Prot
Match: WAX2_ARATH (Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 7.005e-89
Identity = 143/242 (59.09%), Postives = 166/242 (68.60%), Query Frame = 1 
Query:   13 ILHVAVSEPLYYVLHRHFHRNKYLFIHYHSLHHSSPVPQIPTAGHATLLEHIVLSAIVAIPXXXXXXXXXXXXXXXXXXXXMFDFLRCLGHCNVEIIPHRWFETFPFLRYLLYTPTYHSLHHTEKDSNFCLFMPLFDALGNTLNSKSWEDHKKITSASGENVRVPDFVFLAHVVDVTASMHPPFVFRSLASLPYSPKLFMLPFWPLAFSAMFALWAWSKTFLISFYWLRGRL-HRLGCTRYG 735
            +LHV  SEPLYY LHR FHRN Y F HYHS HHSSPVP   TAG+ATLLE+I+L  +  +P                    MFDF+RCLGHCNVEI  H+ FE  P LRYL+YTPTYHSLHH E  +NFCLFMPLFD LG+T N  SWE  KKI  ++GE  RVP+FVFLAH VDV ++MH PFVFRS AS+PY+ ++F+LP WP  F  M  +WAWSKTFL SFY LR  L    G  R+G
Sbjct:  133 VLHVTFSEPLYYFLHRSFHRNNYFFTHYHSFHHSSPVPHPMTAGNATLLENIILCVVAGVPLIGCCLFGVGSLSAIYGYAVMFDFMRCLGHCNVEIFSHKLFEILPVLRYLIYTPTYHSLHHQEMGTNFCLFMPLFDVLGDTQNPNSWELQKKIRLSAGERKRVPEFVFLAHGVDVMSAMHAPFVFRSFASMPYTTRIFLLPMWPFTFCVMLGMWAWSKTFLFSFYTLRNNLCQTWGVPRFG 374

HSP 2 Score: 42.3578 bits (98), Expect = 7.005e-89
Identity = 24/50 (48.00%), Postives = 30/50 (60.00%), Query Frame = 3 
Query:  750 MAFAQTGIITQIENAILRPDKLGV*GPYPCSLNRNNPESAGGLLFVDSPP 899
            + FA  GI  QIE AILR DK+GV      +LN+N   + GG LFV+  P
Sbjct:  379 LPFATKGINDQIEAAILRADKIGVKVISLAALNKNEALNGGGTLFVNKHP 428
The following BLAST results are available for this feature:
BLAST of EY728766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WAX2_ARATH7.005e-8959.09Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-C09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728766 ID=EY728766; Name=EY728766; organism=Citrus sinensis; type=EST; length=910bp
CACGCGTCCGAGATACTTCATGTGGCTGTTTCAGAGCCTTTATATTACGT
TTTACACCGACATTTTCACAGAAATAAATACCTTTTCATCCATTACCATT
CACTCCACCATTCATCTCCAGTACCACAAATTCCAACAGCTGGGCATGCA
ACATTATTGGAGCACATTGTATTAAGTGCCATCGTTGCAATTCCAATTCT
CGGATCTTCCATCATCGGATATGGATCAATAAGCTTGATTTATGGCTATA
TATTGATGTTTGATTTTCTAAGATGCTTGGGGCATTGCAATGTTGAAATT
ATTCCCCATCGGTGGTTTGAAACTTTCCCATTTCTTCGATATCTTCTTTA
TACGCCCACGTACCACAGCCTGCACCACACTGAGAAGGACTCCAATTTCT
GCCTCTTTATGCCTCTCTTTGATGCCCTGGGAAATACACTTAATAGCAAA
TCCTGGGAAGATCATAAGAAAATTACTTCAGCTTCTGGGGAAAATGTGAG
GGTCCCGGATTTTGTTTTCCTAGCACATGTGGTCGATGTAACAGCATCAA
TGCATCCACCGTTTGTTTTCAGATCATTAGCTTCATTGCCATACTCACCA
AAGCTCTTTATGCTGCCTTTTTGGCCCCTTGCATTTTCAGCGATGTTCGC
TTTATGGGCATGGTCTAAGACTTTTCTAATCAGTTTCTACTGGCTTAGGG
GCAGGTTGCACAGACTGGGCTGTACTAGATATGGTTCAGTACTCTTGTCA
TGGCATTTGCTCAGACGGGAATCATTACGCAAATAGAAAATGCCATCCTA
AGGCCTGATAAACTTGGGGTTTAGGGTCCNTACCCTTGCTCATTGAATAG
AAACAATCCAGAAAGTGCGGGGGGGCTTCTTTTTGTGGACAGCCCCCCAC
TTGGANNNNT
back to top