EY728693

Overview
NameEY728693
Unique NameEY728693
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728693 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.939e-30
Identity = 63/78 (80.77%), Postives = 69/78 (88.46%), Query Frame = 1
Query:  136 LSRLVYGKKKPRFYSXGLDNSGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQMARRVWKDYYAKV 369
            L+ L   +K+ +    GLDN+GKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQ+ARRVWKDYYAKV
Sbjct:   11 LATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKV 88          
BLAST of EY728693 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.777e-29
Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 1
Query:  136 LSRLVYGKKKPRFYSXGLDNSGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQMARRVWKDYYAKV 369
            L+ L   +K+ +    GLDN+GKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQ+ARRVWKDYYAKV
Sbjct:   11 LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKV 88          
BLAST of EY728693 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.777e-29
Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 1
Query:  136 LSRLVYGKKKPRFYSXGLDNSGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQMARRVWKDYYAKV 369
            L+ L   +K+ +    GLDN+GKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQ+ARRVWKDYYAKV
Sbjct:   11 LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKV 88          
BLAST of EY728693 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.777e-29
Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 1
Query:  136 LSRLVYGKKKPRFYSXGLDNSGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQMARRVWKDYYAKV 369
            L+ L   +K+ +    GLDN+GKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQ+ARRVWKDYYAKV
Sbjct:   11 LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKV 88          
BLAST of EY728693 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.777e-29
Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 1
Query:  136 LSRLVYGKKKPRFYSXGLDNSGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQMARRVWKDYYAKV 369
            L+ L   +K+ +    GLDN+GKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQ+ARRVWKDYYAKV
Sbjct:   11 LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKV 88          
BLAST of EY728693 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.435e-28
Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 1
Query:  136 LSRLVYGKKKPRFYSXGLDNSGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQMARRVWKDYYAKV 369
            L+ L   +K  +    GLDN+GKTTLLHMLKDERLVQHQPTQYPTSEELSIG IKFKAFDLGGHQ+ARRVW+DYYAKV
Sbjct:   11 LASLGLWQKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKV 88          
BLAST of EY728693 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.457e-21
Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 1
Query:  130 EFLSRLVYGKKKPRFYSXGLDNSGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQMARRVWKDYYAKV 369
            + L++L    K  +    GLDN+GKTTLLHMLK++RL   QPT +PTSEEL+IG++KF  +DLGGHQ ARR+WKDY+ +V
Sbjct:    9 DILAQLGLAHKNAKILFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGQVKFTTYDLGGHQQARRLWKDYFPEV 88          
BLAST of EY728693 vs. ExPASy Swiss-Prot
Match: SAR1_CANAL (Small COPII coat GTPase SAR1 OS=Candida albicans GN=SAR1 PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.101e-20
Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 1
Query:  130 EFLSRLVYGKKKPRFYSXGLDNSGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQMARRVWKDYYAKV 369
            + LS L    K  +    GLDN+GKTTLLHMLK++RL   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+WKDY+ +V
Sbjct:    9 DILSSLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEV 88          
BLAST of EY728693 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.101e-20
Identity = 46/78 (58.97%), Postives = 57/78 (73.08%), Query Frame = 1
Query:  136 LSRLVYGKKKPRFYSXGLDNSGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQMARRVWKDYYAKV 369
            L+ L    KK +    GLDN+GKTTLLHMLKD+R+ QH PT +PTSE++S+G I F  +DLGGH  ARRVWKDY+  V
Sbjct:   12 LNMLGLANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAV 89          
BLAST of EY728693 vs. ExPASy Swiss-Prot
Match: SAR1_PICST (Small COPII coat GTPase SAR1 OS=Pichia stipitis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.439e-20
Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 1
Query:  130 EFLSRLVYGKKKPRFYSXGLDNSGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQMARRVWKDYYAKV 369
            + LS L    K  +    GLDN+GKTTLLHMLK++RL   QPT +PTSEEL+IG ++F  FDLGGHQ ARR+WKDY+ +V
Sbjct:    9 DVLSSLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEV 88          
The following BLAST results are available for this feature:
BLAST of EY728693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
SAR1_TOBAC9.939e-3080.77GTP-binding protein SAR1 OS=Nicotiana tabacum GN=S... [more]
SAR1B_BRACM3.777e-2979.49GTP-binding protein SAR1B OS=Brassica campestris G... [more]
SAR1B_ARATH3.777e-2979.49GTP-binding protein SAR1B OS=Arabidopsis thaliana ... [more]
SAR1A_BRACM3.777e-2979.49GTP-binding protein SAR1A OS=Brassica campestris G... [more]
SAR1A_ARATH3.777e-2979.49GTP-binding protein SAR1A OS=Arabidopsis thaliana ... [more]
SAR2_SOLLC1.435e-2878.21GTP-binding protein SAR2 OS=Solanum lycopersicum G... [more]
SAR1_USTMA6.457e-2157.50Small COPII coat GTPase SAR1 OS=Ustilago maydis GN... [more]
SAR1_CANAL1.101e-2058.75Small COPII coat GTPase SAR1 OS=Candida albicans G... [more]
SAR1_CAEEL1.101e-2058.97GTP-binding protein SAR1 OS=Caenorhabditis elegans... [more]
SAR1_PICST1.439e-2058.75Small COPII coat GTPase SAR1 OS=Pichia stipitis GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-C11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728693 ID=EY728693; Name=EY728693; organism=Citrus sinensis; type=EST; length=937bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGTTTTCTCAGCTCT
TCTTCAATTTTCTTTCTGCAGACCGTTTATCTTTCCCAAAAAAAAAAAAG
AAAATGTTTCTTNGTTGATTGGTTCTATGGAATTCTTGTCTCGCTTGGTT
TATGGCAAAAAGAAGCCAAGATTTTATTCTTNGGGCCTTGATAATTCCGG
CAAAACGACGTTGCTTCACATGCTCAAAGATGAGAGACTAGTACAGCATC
AGCCAACACAGTACCCGACATCAGAGGAATTGAGTATCGGGAAAATAAAG
TTCAAGGCTTTTGATTTGGGTGGCCATCAGATGGCCCGCAGAGTCTGGAA
AGACTACTATGCCAAGGTATATTTCAATTTTACTTTATATTTTATGCCTT
TCATAATTTCAACTAATTGTTTTAGTAACTGCTTGTTCATAATTGCATCA
CCTCATATATATTCAATTTCTAGGTGTGTATTAAGATTGGCGAAAAACTT
TGAGAAATTTGATAACCTCTAAAACCGTAAGAAGAATAAATTTAGTGTTC
TACATTTCTAGTATCATGTNTTAAGCGCATAACTTGAATGTTGAGAAGGG
CTTTTGCAAATGAAAATTTTGTAGTTTTAATATGCTCAGTTCAAGAAGGT
AGTAATGGAAAATTGATATAATATTTGTTTTGTGTGCTGACGCCTCTGTA
TGACCAAGTTGACTATCTTGTGTTAAATNNCACATAATATGNTATCTTTT
CATCATTTAAGTTGATGCTGTGGTCTATCTGGTTGATGCTATGACAGGAG
AGATCTCTGAATCAAAAGGGAGCTGATGCTCTCCTTTCGATGAGGCCTAG
CTGATGTCCATTCCTCTCTGGGAAACAGATCCAATACATATGCTGCTCAA
AGGATAATTGGTTACACTGGGCCTGACTACTTTACAA
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