EY728679

Overview
NameEY728679
Unique NameEY728679
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728679 vs. ExPASy Swiss-Prot
Match: ANMK_PSEPF (Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=anmK PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.086e-50
Identity = 77/112 (68.75%), Postives = 89/112 (79.46%), Query Frame = 1
Query:  139 MSLYIGVMSGTSLDGLDIALIEFAPAIKLIATHYIPMPDSLRSELLGLCASGPDEXARSAIAQQNWVTLAXQGIHALLEQQKLNPRTFEQLAATGKTIGTKLAGALTCRMGN 474
            M+LYIGVMSGTSLDGLDIALIE + AI L+ATHYIPMPD+LR+ELLGLCA GPDE ARSAIAQQNWV LA QGIH LLEQQ+L P     + + G+TI  + A   T ++GN
Sbjct:    1 MALYIGVMSGTSLDGLDIALIEQSSAINLVATHYIPMPDTLRAELLGLCAGGPDEIARSAIAQQNWVKLAAQGIHTLLEQQQLKPEAIRAIGSHGQTIRHEPARGFTVQIGN 112          

HSP 2 Score: 66.2402 bits (160), Expect = 5.086e-50
Identity = 34/50 (68.00%), Postives = 37/50 (74.00%), Query Frame = 2
Query:  488 ELDGINVVSDFRNRDVPASCPGAPLVPGFHEALVGERTRHRAVLKSGGLT 637
            EL GI VVSDFR+RDV A   GAPLVP FHEAL  ERT +RAVL  GG +
Sbjct:  118 ELTGITVVSDFRSRDVAAGGQGAPLVPAFHEALFEERTGNRAVLNVGGFS 167          
BLAST of EY728679 vs. ExPASy Swiss-Prot
Match: ANMK_PSEF5 (Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=anmK PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 4.991e-47
Identity = 72/112 (64.29%), Postives = 92/112 (82.14%), Query Frame = 1
Query:  139 MSLYIGVMSGTSLDGLDIALIEFAPAIKLIATHYIPMPDSLRSELLGLCASGPDEXARSAIAQQNWVTLAXQGIHALLEQQKLNPRTFEQLAATGKTIGTKLAGALTCRMGN 474
            M+LYIGVMSGTSLDGLDIALIE +PA++L+AT YIPMPD+LR+ELLGLCASGPDE ARSAIAQQ+WV LA QGI+ LL+QQ+L P+    + + G+T+  + +   T ++GN
Sbjct:    1 MALYIGVMSGTSLDGLDIALIEQSPALRLVATRYIPMPDTLRAELLGLCASGPDEIARSAIAQQHWVELAAQGINQLLQQQQLPPQDIRAIGSHGQTVRHEPSRGFTVQIGN 112          

HSP 2 Score: 63.1586 bits (152), Expect = 4.991e-47
Identity = 32/50 (64.00%), Postives = 36/50 (72.00%), Query Frame = 2
Query:  488 ELDGINVVSDFRNRDVPASCPGAPLVPGFHEALVGERTRHRAVLKSGGLT 637
            EL GI VVSDFR+RDV A   GAPLVP FHEAL  +R  +RAVL  GG +
Sbjct:  118 ELTGITVVSDFRSRDVAAGGQGAPLVPAFHEALFDQRPGNRAVLNVGGFS 167          
BLAST of EY728679 vs. ExPASy Swiss-Prot
Match: ANMK_PSEPK (Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas putida (strain KT2440) GN=anmK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.093e-38
Identity = 59/112 (52.68%), Postives = 80/112 (71.43%), Query Frame = 1
Query:  139 MSLYIGVMSGTSLDGLDIALIEFAPAIKLIATHYIPMPDSLRSELLGLCASGPDEXARSAIAQQNWVTLAXQGIHALLEQQKLNPRTFEQLAATGKTIGTKLAGALTCRMGN 474
            M+LY+GVMSGTSLDGLDIAL+E    ++L+ATHY+PMP  LR +LL LC+SGPDE AR+A+A+  W +LA +GI  LL +Q L P     + + G+TI  + A   T ++GN
Sbjct:    1 MALYLGVMSGTSLDGLDIALVEQGEQLELLATHYLPMPPDLRQDLLALCSSGPDEIARAALAENRWASLAGEGIRQLLARQGLKPEAVRAIGSHGQTIRHEPARGFTVQIGN 112          

HSP 2 Score: 56.9954 bits (136), Expect = 2.093e-38
Identity = 28/50 (56.00%), Postives = 33/50 (66.00%), Query Frame = 2
Query:  488 ELDGINVVSDFRNRDVPASCPGAPLVPGFHEALVGERTRHRAVLKSGGLT 637
            EL GI+VV+DFR RDV A   GAPLVP FHE L  +  R  A+L  GG +
Sbjct:  118 ELTGISVVADFRRRDVAAGGQGAPLVPAFHETLFSQLGRRLAILNVGGFS 167          
BLAST of EY728679 vs. ExPASy Swiss-Prot
Match: ANMK_PSE14 (Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=anmK PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.440e-36
Identity = 56/109 (51.38%), Postives = 76/109 (69.72%), Query Frame = 1
Query:  148 YIGVMSGTSLDGLDIALIEFAPAIKLIATHYIPMPDSLRSELLGLCASGPDEXARSAIAQQNWVTLAXQGIHALLEQQKLNPRTFEQLAATGKTIGTKLAGALTCRMGN 474
            YIGVMSG+SLDG+DIAL++     +L+ATHYIPMP+ L +ELLGLC+SG DE AR+AIA+Q W  L  QG+  LLE Q + P     + + G+TI  + A   + ++GN
Sbjct:    5 YIGVMSGSSLDGIDIALLKQDDRSRLLATHYIPMPEDLHAELLGLCSSGVDELARAAIAEQKWCRLVAQGVQTLLEDQNMVPAQIRAIGSHGQTIRHEPARGYSIQIGN 113          

HSP 2 Score: 60.077 bits (144), Expect = 1.440e-36
Identity = 30/50 (60.00%), Postives = 33/50 (66.00%), Query Frame = 2
Query:  488 ELDGINVVSDFRNRDVPASCPGAPLVPGFHEALVGERTRHRAVLKSGGLT 637
            EL  I VVSDFR RD+ A   GAPLVP FHEAL  +   HRAVL  GG +
Sbjct:  119 ELTEITVVSDFRRRDIAAGGQGAPLVPAFHEALFDDNKDHRAVLNIGGFS 168          
BLAST of EY728679 vs. ExPASy Swiss-Prot
Match: ANMK_PSEU2 (Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=anmK PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.401e-36
Identity = 54/109 (49.54%), Postives = 76/109 (69.72%), Query Frame = 1
Query:  148 YIGVMSGTSLDGLDIALIEFAPAIKLIATHYIPMPDSLRSELLGLCASGPDEXARSAIAQQNWVTLAXQGIHALLEQQKLNPRTFEQLAATGKTIGTKLAGALTCRMGN 474
            YIGVMSG+SLDG+DIAL++     +L+ATHYIPMP+ L +ELLGLC+SG DE AR+AIA+Q W  L  QG+  LL+ Q + P     + + G+TI  + +   + ++GN
Sbjct:    5 YIGVMSGSSLDGIDIALLKQDDRSRLLATHYIPMPEDLHAELLGLCSSGADELARAAIAEQKWCRLVAQGVQTLLQDQNMVPAQIRAIGSHGQTIRHEPSRGYSIQIGN 113          

HSP 2 Score: 60.077 bits (144), Expect = 5.401e-36
Identity = 30/50 (60.00%), Postives = 33/50 (66.00%), Query Frame = 2
Query:  488 ELDGINVVSDFRNRDVPASCPGAPLVPGFHEALVGERTRHRAVLKSGGLT 637
            EL  I VVSDFR RD+ A   GAPLVP FHEAL  +   HRAVL  GG +
Sbjct:  119 ELTEITVVSDFRRRDIAAGGQGAPLVPAFHEALFDDNKDHRAVLNIGGFS 168          
BLAST of EY728679 vs. ExPASy Swiss-Prot
Match: ANMK_PSEAE (Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas aeruginosa GN=anmK PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.555e-35
Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = 1
Query:  139 MSLYIGVMSGTSLDGLDIALIEFAPAIKLIATHYIPMPDSLRSELLGLCASGPDEXARSAIAQQNWVTLAXQGIHALLEQQKLNPRTFEQLAATGKTIGTKLAGALTCRMGN 474
            M  Y+G+MSGTSLDG+DI LIE      L+A+HY+PMP  LR ++L LC  GPDE AR+A  +Q WV LA QG+  LL QQ+++P     + + G+TI  + A   T ++GN
Sbjct:    1 MPRYLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPAGLREDILALCVPGPDEIARAAEVEQRWVALAAQGVRELLLQQQMSPDEVRAIGSHGQTIRHEPARHFTVQIGN 112          

HSP 2 Score: 60.4622 bits (145), Expect = 1.555e-35
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 2
Query:  488 ELDGINVVSDFRNRDVPASCPGAPLVPGFHEALVGERTRHRAVLKSGGLT 637
            EL GI+VV+DFR RDV A   GAPLVP FH+AL G+    RAVL  GG +
Sbjct:  118 ELTGIDVVADFRRRDVAAGGQGAPLVPAFHQALFGDDDTSRAVLNIGGFS 167          
BLAST of EY728679 vs. ExPASy Swiss-Prot
Match: ANMK_PSEA7 (Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas aeruginosa (strain PA7) GN=anmK PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.638e-35
Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = 1
Query:  139 MSLYIGVMSGTSLDGLDIALIEFAPAIKLIATHYIPMPDSLRSELLGLCASGPDEXARSAIAQQNWVTLAXQGIHALLEQQKLNPRTFEQLAATGKTIGTKLAGALTCRMGN 474
            M  Y+G+MSGTS+DG+DI LIE      L+A+HY+PMP  LR ++L LCA GPDE AR+A  ++ WV LA QG+  LL QQ+L P     + + G+TI  + A   T ++GN
Sbjct:    3 MPRYLGLMSGTSMDGMDIVLIEQGDRTTLLASHYLPMPADLREDILALCAPGPDEIARAADVERRWVGLAAQGVGELLRQQRLAPGAVRAIGSHGQTIRHEPARHFTVQIGN 114          

HSP 2 Score: 60.4622 bits (145), Expect = 2.638e-35
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 2
Query:  488 ELDGINVVSDFRNRDVPASCPGAPLVPGFHEALVGERTRHRAVLKSGGLT 637
            EL GI+V++DFR RDV A   GAPLVP FH+AL G+  + RA+L  GG +
Sbjct:  120 ELTGIDVIADFRRRDVAAGGQGAPLVPAFHQALFGDSGKARAILNIGGFS 169          
BLAST of EY728679 vs. ExPASy Swiss-Prot
Match: ANMK_PSESM (Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas syringae pv. tomato GN=anmK PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.476e-35
Identity = 54/109 (49.54%), Postives = 75/109 (68.81%), Query Frame = 1
Query:  148 YIGVMSGTSLDGLDIALIEFAPAIKLIATHYIPMPDSLRSELLGLCASGPDEXARSAIAQQNWVTLAXQGIHALLEQQKLNPRTFEQLAATGKTIGTKLAGALTCRMGN 474
            YIGVMSG+SLDG+DIAL++     +L+ATHYIPMP+ L +ELLGLC+SG DE AR+AIA+Q W  L  QG+  LL++Q         + + G+TI  + A   + ++GN
Sbjct:    5 YIGVMSGSSLDGIDIALLKQDDRSRLVATHYIPMPEDLHAELLGLCSSGADEFARAAIAEQKWCKLVAQGVQTLLKEQNKVVADIRAIGSHGQTIRHEPARGYSIQIGN 113          

HSP 2 Score: 60.077 bits (144), Expect = 4.476e-35
Identity = 30/50 (60.00%), Postives = 33/50 (66.00%), Query Frame = 2
Query:  488 ELDGINVVSDFRNRDVPASCPGAPLVPGFHEALVGERTRHRAVLKSGGLT 637
            EL  I VVSDFR RD+ A   GAPLVP FHEAL  +   HRAVL  GG +
Sbjct:  119 ELTEITVVSDFRRRDIAAGGQGAPLVPAFHEALFDDNKDHRAVLNIGGFS 168          
BLAST of EY728679 vs. ExPASy Swiss-Prot
Match: ANMK_NITEU (Anhydro-N-acetylmuramic acid kinase OS=Nitrosomonas europaea GN=anmK PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.061e-22
Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 1
Query:  148 YIGVMSGTSLDGLDIALIEFA-PAIKLIATHYIPMPDSLRSELLGLCASGPDEXARSAIAQQNWVTLAXQGIHALLEQQKLNPRTFEQLAATGKTI 432
            Y+G+MSGTSLDG+D  L++F+ P+  L+ T YIP   SLR+ LLGL  +G +E  R+AI          Q +  LLE+  ++P     +   G+TI
Sbjct:    3 YVGIMSGTSLDGIDAVLVDFSGPSFSLLHTCYIPYDQSLRAALLGLNQAGENELHRAAILSNQLSGWYAQAVGRLLEKSGIDPGEIIAVGCHGQTI 98          

HSP 2 Score: 56.9954 bits (136), Expect = 1.061e-22
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 2
Query:  488 ELDGINVVSDFRNRDVPASCPGAPLVPGFHEALVGERTRHRAVLKSGGLT 637
            EL G+ VV+DFR+RD+ A   GAPLVP FH  +   R  HR ++  GG+T
Sbjct:  120 ELTGMTVVTDFRSRDIAAGGQGAPLVPAFHHEMFAHRDIHRLIINIGGIT 169          
BLAST of EY728679 vs. ExPASy Swiss-Prot
Match: ANMK_BORPD (Anhydro-N-acetylmuramic acid kinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=anmK PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.917e-21
Identity = 41/98 (41.84%), Postives = 59/98 (60.20%), Query Frame = 1
Query:  145 LYIGVMSGTSLDGLDIALIEFAP--AIKLIATHYIPMPDSLRSELLGLCASGPDEXARSAIAQQNWVTLAXQGIHALLEQQKLNPRTFEQLAATGKTI 432
            L+IG+MSGTSLDG D  L+  A   A +++AT  +PMPD+LR+ELL L  SG DE  R+A+A Q    +    + ALL+Q +        +   G+T+
Sbjct:   15 LFIGLMSGTSLDGADGVLVRLAAGQAPQVLATAGLPMPDALRAELLALNRSGADELHRAALAAQALARVYADAVQALLQQARQPATAVTAIGVHGQTV 112          

HSP 2 Score: 51.9878 bits (123), Expect = 1.917e-21
Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  488 ELDGINVVSDFRNRDVPASCPGAPLVPGFHEALVGERTRHRAVLKSGGL 634
            EL GI+VV+DFR+RDV A   GAPLVP FH A+       RAVL  GG+
Sbjct:  132 ELTGIDVVADFRSRDVAAGGQGAPLVPPFHAAMFA-APHERAVLNLGGI 179          
The following BLAST results are available for this feature:
BLAST of EY728679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
ANMK_PSEPF5.086e-5068.75Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas... [more]
ANMK_PSEF54.991e-4764.29Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas... [more]
ANMK_PSEPK2.093e-3852.68Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas... [more]
ANMK_PSE141.440e-3651.38Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas... [more]
ANMK_PSEU25.401e-3649.54Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas... [more]
ANMK_PSEAE1.555e-3548.21Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas... [more]
ANMK_PSEA72.638e-3548.21Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas... [more]
ANMK_PSESM4.476e-3549.54Anhydro-N-acetylmuramic acid kinase OS=Pseudomonas... [more]
ANMK_NITEU1.061e-2240.63Anhydro-N-acetylmuramic acid kinase OS=Nitrosomona... [more]
ANMK_BORPD1.917e-2141.84Anhydro-N-acetylmuramic acid kinase OS=Bordetella ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-B04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728679 ID=EY728679; Name=EY728679; organism=Citrus sinensis; type=EST; length=651bp
CCACTGGGTCAAAAGCTGCCAATGGCTGATCCAATCGCCAAGGCCGAGCG
CGCACGCTTCCTGCAGCAGAGCCAGCCACTCATGGCCCGCATGGACCAGG
AGCGCTCCACCCTCCTGGCCTCGGCGAAACGCTAAACCATGTCGCTCTAT
ATAGGTGTGATGTCCGGGACCAGCCTTGATGGCCTGGACATTGCGCTGAT
CGAGTTTGCACCGGCGATCAAGCTGATTGCCACCCATTACATCCCTATGC
CTGACTCCCTGCGTTCCGAGCTGCTTGGCCTGTGCGCCAGTGGCCCGGAC
GAGATNGCCCGTTCGGCGATTGCCCAGCAGAACTGGGTGACACTCGCCGN
CCAAGGCATTCACGCCCTATTGGAACAGCAGAAACTCAACCCCAGGACAT
TCGAGCAATTGGCAGCCACGGGCAAAACAATCGGCACGAAACTGGCCGGG
GCTTTAACGTGCAGAATGGGCAACCGGCGCTGCTCACGAATTGGACGGAA
TCAACGTTGTCAGTGATTTCCGCAACCGCGATGTCCCCGCAAGTTGCCCA
GGCGCCCCGCTGGTTCCTGGATTTCATGAAGCATTGGTTGGCGAGCGTAC
ACGCCACCGGGCCGTATTGAAATCGGGGGGTTTAACAACCTCAGCTTGAA
T
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