EY728674

Overview
NameEY728674
Unique NameEY728674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728674_ssr19 microsatellite EY728674_ssr19:19..30. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig401 contig Csv1_Contig401:14..932. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728674 vs. ExPASy Swiss-Prot
Match: M2K4_ARATH (Mitogen-activated protein kinase kinase 4 OS=Arabidopsis thaliana GN=MKK4 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.867e-49
Identity = 110/245 (44.90%), Postives = 153/245 (62.45%), Query Frame = 1
Query:  184 YSDLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLXPSQRPDWAT-SCVLYVSGIRPVCPTGHLGNSQFIEC 915
            YSDL +   +G G GGTVYKV HR + ++YALKV++G+ + TVRRQ+ RE+EILR  + P +V+C  +F++ +G+I +L+E+MD G+L+        + E +LA ++ QIL GL+YLH   I+HRDIKPSNLL+N+    VKIADFGVS+I+ +++D CNS VGT AYMSPER + D           DIWS          G FPF   S++ DWA+  C + +S       T       FI C
Sbjct:   76 YSDLVRGNRIGSGAGGTVYKVIHRPSSRLYALKVIYGNHEETVRRQICREIEILRDVNHPNVVKCHEMFDQ-NGEIQVLLEFMDKGSLEGA----HVWKEQQLADLSRQILSGLAYLHSRHIVHRDIKPSNLLINSAK-NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNQGKYDGYAGDIWSLGVSILEFYLGRFPF-PVSRQGDWASLMCAICMSQPPEAPATASPEFRHFISC 313          
BLAST of EY728674 vs. ExPASy Swiss-Prot
Match: M2K5_ARATH (Mitogen-activated protein kinase kinase 5 OS=Arabidopsis thaliana GN=MKK5 PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.581e-48
Identity = 107/244 (43.85%), Postives = 151/244 (61.89%), Query Frame = 1
Query:  187 SDLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLXPSQRPDWAT-SCVLYVSGIRPVCPTGHLGNSQFIEC 915
            S+LE++  +G G GGTVYKV H  T + +ALKV++G+ + TVRRQ+ RE+EILR  D P +V+C  +F+  +G+I +L+E+MD G+L+        + E +LA ++ QIL GL+YLH   I+HRDIKPSNLL+N+    VKIADFGVS+I+ +++D CNS VGT AYMSPER + D           D+WS          G FPF   S++ DWA+  C + +S       T       F+ C
Sbjct:   68 SELERVNRIGSGAGGTVYKVIHTPTSRPFALKVIYGNHEDTVRRQICREIEILRSVDHPNVVKCHDMFDH-NGEIQVLLEFMDQGSLEGA----HIWQEQELADLSRQILSGLAYLHRRHIVHRDIKPSNLLINSAK-NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGRYDGYAGDVWSLGVSILEFYLGRFPFAV-SRQGDWASLMCAICMSQPPEAPATASQEFRHFVSC 304          
BLAST of EY728674 vs. ExPASy Swiss-Prot
Match: MP2K1_XENLA (Dual specificity mitogen-activated protein kinase kinase 1 OS=Xenopus laevis GN=map2k1 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.937e-38
Identity = 88/212 (41.51%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  190 DLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLXPSQR 822
            D EK+  LG GNGG V+KV H+ T  I A K++H +  P +R Q+ RE+++L   +SP+IV  +G F    G+I+I ME+MD G+LD +L K G   E  L  ++  ++KGL+YL   HKI+HRD+KPSN+LVN+   ++K+ DFGVS  +  S+   NS+VGT +YMSPER               DIWS          G +P   P  +
Sbjct:   67 DFEKVSELGAGNGGVVFKVSHKPTSLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGKIPEKILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----GTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 269          
BLAST of EY728674 vs. ExPASy Swiss-Prot
Match: MP2K1_CRIGR (Dual specificity mitogen-activated protein kinase kinase 1 OS=Cricetulus griseus GN=MAP2K1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.303e-38
Identity = 86/212 (40.57%), Postives = 126/212 (59.43%), Query Frame = 1
Query:  190 DLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLXPSQR 822
            D EK+  LG GNGG V+KV H+ +  + A K++H +  P +R Q+ RE+++L   +SP+IV  +G+F    G+I+I ME+MD G+LD +L K G   E  L  ++  ++KGL+YL   HKI+HRD+KPSN+LVN+   ++K+ DFGVS  +  S+   NS+VGT +YMSPER               DIWS          G +P   P  +
Sbjct:   67 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGVFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 269          
BLAST of EY728674 vs. ExPASy Swiss-Prot
Match: DSOR1_DROME (Dual specificity mitogen-activated protein kinase kinase dSOR1 OS=Drosophila melanogaster GN=Dsor1 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 4.314e-38
Identity = 92/210 (43.81%), Postives = 123/210 (58.57%), Query Frame = 1
Query:  190 DLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH-GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLXPS 816
            DLEKL  LG GNGG V KV+H  T  I A K++H +  P +++Q+ RE+++L   + P IV  +G F    G+I+I MEYMD G+LD +L + G   E  L  I   +LKGLSYL   H IIHRD+KPSN+LVN++  ++KI DFGVS  +  S+   NS+VGT +YMSPER               DIWS          G +P   P+
Sbjct:   86 DLEKLGELGSGNGGVVMKVRHTHTHLIMARKLIHLEVKPAIKKQILRELKVLHECNFPHIVGFYGAFYS-DGEISICMEYMDGGSLDLILKRAGRIPESILGRITLAVLKGLSYLRDNHAIIHRDVKPSNILVNSSG-EIKICDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----GTHYSVQSDIWSLGLSLVEMAIGMYPIPPPN 286          
BLAST of EY728674 vs. ExPASy Swiss-Prot
Match: MP2K1_SERCA (Dual specificity mitogen-activated protein kinase kinase 1 (Fragment) OS=Serinus canaria GN=MAP2K1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.635e-38
Identity = 87/212 (41.04%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  190 DLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLXPSQR 822
            D EK+  LG GNGG V+KV H+ +  I A K++H +  P +R Q+ RE+++L   +SP+IV  +G F    G+I+I ME+MD G+LD +L K G   E  L  ++  ++KGL+YL   HKI+HRD+KPSN+LVN+   ++K+ DFGVS  +  S+   NS+VGT +YMSPER               DIWS          G +P   P  +
Sbjct:   60 DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----GTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDSK 262          
BLAST of EY728674 vs. ExPASy Swiss-Prot
Match: MP2K1_PANTR (Dual specificity mitogen-activated protein kinase kinase 1 OS=Pan troglodytes GN=MAP2K1 PE=2 SV=3)

HSP 1 Score: 158.303 bits (399), Expect = 5.635e-38
Identity = 86/212 (40.57%), Postives = 126/212 (59.43%), Query Frame = 1
Query:  190 DLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLXPSQR 822
            D EK+  LG GNGG V+KV H+ +  + A K++H +  P +R Q+ RE+++L   +SP+IV  +G F    G+I+I ME+MD G+LD +L K G   E  L  ++  ++KGL+YL   HKI+HRD++PSN+LVN+   ++K+ DFGVS  +  S+   NS+VGT +YMSPERF              DIWS          G +P   P  +
Sbjct:   67 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVQPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERFQ-----GTHYSVQSDIWSMGLSPVEMAVGRYPIPSPDAK 269          
BLAST of EY728674 vs. ExPASy Swiss-Prot
Match: MP2K1_RAT (Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus GN=Map2k1 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 9.611e-38
Identity = 86/212 (40.57%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  190 DLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLXPSQR 822
            D EK+  LG GNGG V+KV H+ +  + A K++H +  P +R Q+ RE+++L   +SP+IV  +G F    G+I+I ME+MD G+LD +L K G   E  L  ++  ++KGL+YL   HKI+HRD+KPSN+LVN+   ++K+ DFGVS  +  S+   NS+VGT +YMSPER               DIWS          G +P   P  +
Sbjct:   67 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 269          
BLAST of EY728674 vs. ExPASy Swiss-Prot
Match: MP2K1_RABIT (Dual specificity mitogen-activated protein kinase kinase 1 OS=Oryctolagus cuniculus GN=MAP2K1 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 9.611e-38
Identity = 86/212 (40.57%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  190 DLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLXPSQR 822
            D EK+  LG GNGG V+KV H+ +  + A K++H +  P +R Q+ RE+++L   +SP+IV  +G F    G+I+I ME+MD G+LD +L K G   E  L  ++  ++KGL+YL   HKI+HRD+KPSN+LVN+   ++K+ DFGVS  +  S+   NS+VGT +YMSPER               DIWS          G +P   P  +
Sbjct:   67 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 269          
BLAST of EY728674 vs. ExPASy Swiss-Prot
Match: MP2K1_MOUSE (Dual specificity mitogen-activated protein kinase kinase 1 OS=Mus musculus GN=Map2k1 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 9.611e-38
Identity = 86/212 (40.57%), Postives = 125/212 (58.96%), Query Frame = 1
Query:  190 DLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLXPSQR 822
            D EK+  LG GNGG V+KV H+ +  + A K++H +  P +R Q+ RE+++L   +SP+IV  +G F    G+I+I ME+MD G+LD +L K G   E  L  ++  ++KGL+YL   HKI+HRD+KPSN+LVN+   ++K+ DFGVS  +  S+   NS+VGT +YMSPER               DIWS          G +P   P  +
Sbjct:   67 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 269          
The following BLAST results are available for this feature:
BLAST of EY728674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
M2K4_ARATH1.867e-4944.90Mitogen-activated protein kinase kinase 4 OS=Arabi... [more]
M2K5_ARATH1.581e-4843.85Mitogen-activated protein kinase kinase 5 OS=Arabi... [more]
MP2K1_XENLA1.937e-3841.51Dual specificity mitogen-activated protein kinase ... [more]
MP2K1_CRIGR3.303e-3840.57Dual specificity mitogen-activated protein kinase ... [more]
DSOR1_DROME4.314e-3843.81Dual specificity mitogen-activated protein kinase ... [more]
MP2K1_SERCA5.635e-3841.04Dual specificity mitogen-activated protein kinase ... [more]
MP2K1_PANTR5.635e-3840.57Dual specificity mitogen-activated protein kinase ... [more]
MP2K1_RAT9.611e-3840.57Dual specificity mitogen-activated protein kinase ... [more]
MP2K1_RABIT9.611e-3840.57Dual specificity mitogen-activated protein kinase ... [more]
MP2K1_MOUSE9.611e-3840.57Dual specificity mitogen-activated protein kinase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-A10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728674 ID=EY728674; Name=EY728674; organism=Citrus sinensis; type=EST; length=918bp
CCACGCGTCCGCAAAAAGATAATAATAATAACAATAATGGCCGTCGTAAA
GCAACGTCGCCAACTCAATCTTCGTCTCCCTATGCCTGAACTTTCGGAGC
GGTGCCTGCGTTTTCCTTTGGCCCTCCCTCCCACTGCCCCCAACACTAAT
AACAACACCACCGCCACCACCGCCGCCATCGCCTACTCTGATCTTGAGAA
ACTTCAAGTCCTTGGCCACGGAAACGGTGGAACAGTCTACAAAGTCCAAC
ACAGATGCACCCTCAAAATCTACGCCCTCAAAGTTGTCCATGGCGACGCT
GACCCCACCGTGCGCCGCCAAGTCTTCCGTGAAATGGAAATCCTCCGCCG
CACTGACTCTCCTTTCATTGTTCAGTGCTTTGGTATATTCGAAAAGCCTT
CTGGTGACATCGCTATTTTGATGGAGTACATGGATTCAGGCACCCTCGAT
ACTTTGTTGAACAAAAACGGCACCTTTTCGGAGCCTAAGCTTGCTCACAT
AGCCTCTCAAATTCTCAAAGGTTTGAGTTATTTGCATGGCCATAAAATCA
TTCATCGAGATATTAAGCCATCCAATTTACTGGTTAATAACAACAACATG
CAAGTGAAAATAGCCGATTTTGGTGTTAGTAAAATCATGTGCCGTTCTTT
GGATGCTTGTAATTCTTATGTGGGTACTTGTGCTTATATGAGTCCTGAAA
GATTTGACCCCGATGCCTACGGAGGGAATTACNATGGTTATGCTGGAGAT
ATTTGGAGCTTGGGGCTTACTTTGTTGGAGCTTTATTTGGGTCATTTTCC
GTTTCTTCANCCAAGTCAAAGACCCGATTGGGCAACCTCATGTGTGCTAT
ATGTTTCGGGGATCCGNCCAGTTTGCCCGACGGGGCATCTCGGAAATTCG
CAGTTTATTGAGTGTGGT
back to top