EY728658

Overview
NameEY728658
Unique NameEY728658
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:45..865. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728658 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 438.728 bits (1127), Expect = 1.821e-122
Identity = 220/234 (94.02%), Postives = 224/234 (95.73%), Query Frame = 1
Query:  118 FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVXQHAALFTSTIMSKLLAPPNVQLFNAVAAEELDSQGGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVXSCGHDG 819
            FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVV +HAALFTSTIMSKLLA PNV+LFNAVAAE+L  +GGRVGGVVTNWALVSMNHDTQSCMDPNVME KVVV SCGHDG
Sbjct:    9 FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 242          
BLAST of EY728658 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 3.458e-97
Identity = 174/220 (79.09%), Postives = 194/220 (88.18%), Query Frame = 1
Query:  160 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVXQHAALFTSTIMSKLLAPPNVQLFNAVAAEELDSQGGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVXSCGHDG 819
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDPIKESIVSREMTRRYM DMITYADTD    GAGS+GL C YELSKNP++Q+AIIEQSVSPGGGAWLGGQLFS MVVRKPAH+FLDELGI+YDEQDNYVV +HAALFTSTIMSKLLA PNV+LFNAVAAE+L  +GGRVGGVVTNWALVSMNHDTQSCMDPNVME KVVV SCGHDG
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 238          
BLAST of EY728658 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.171e-91
Identity = 169/232 (72.84%), Postives = 195/232 (84.05%), Query Frame = 1
Query:  127 SVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVXQHAALFTSTIMSKLLAPPNVQLFNAVAAEELDSQGGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVXSCGHDG 819
            S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDPIKESIVSREMTRRYMTDMITYA+TD    GAGSAGLS AYE+SKNPN+Q+AIIEQSVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDEQD YVV +HAALFTSTIMSKLLA PNV+LFNAVAAE+L  +G RVGGVVTNWALV+ NH TQSCMDPNVME K+VV SCGHDG
Sbjct:    9 SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDG 235          
BLAST of EY728658 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 5.005e-88
Identity = 168/240 (70.00%), Postives = 191/240 (79.58%), Query Frame = 1
Query:  133 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVXQHAALFTSTIMSKLLAPPNVQLFNAVAAEELDSQGGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVXSCGHDG 819
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F+F PIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSK+P + IAI+EQSVSPGGGAWLGGQLFSAMVVRKPAH+FLDELG+ YDE ++YVV +HAALFTST+MS LLA PNV+LFNAVA E+L  +GGRVGGVVTNWALVSMNHDTQSCMDPNVME KVVV SCGHDG
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 241          
BLAST of EY728658 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 4.237e-87
Identity = 165/238 (69.33%), Postives = 189/238 (79.41%), Query Frame = 1
Query:  133 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVXQHAALFTSTIMSKLLAPPNVQLFNAVAAEELDSQGGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVXSCGHDG 819
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F+F PIKESIVSREMTRRYMTDMIT+ADTD    GAGSAGLSCAYELSK+P + +AI+EQSVSPGGGAWLGGQLFSAMVVR+PAH+FLDELG+ YDE ++YVV +HAALFTST+MS+LLA PNV+LFNAVA E+L  + GRVGGVVTNWALVSMNHDTQSCMDPNVME KVVV SCGHDG
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDG 238          
BLAST of EY728658 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.678e-59
Identity = 113/185 (61.08%), Postives = 140/185 (75.68%), Query Frame = 1
Query:  280 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVXQHAALFTSTIMSKLLAPPNVQLFNAVAAEEL----DSQGGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVXSCGHDG 819
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L K  P+++IAIIE SVSPGGGAWLGGQLFSAM++RKPA  FL E+G+ Y+++ NYVV +HAALFTSTIMSK+L  PN++LFNA   E+L      +G R+ GVVTNW LVSM+HD QSCMDPN +   +++ + GHDG
Sbjct:   44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVSMHHDDQSCMDPNTINAPLIISTTGHDG 228          
BLAST of EY728658 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.678e-59
Identity = 115/198 (58.08%), Postives = 151/198 (76.26%), Query Frame = 1
Query:  247 ASASPPYDLN-TFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVXQHAALFTSTIMSKLLAPPNVQLFNAVAAEELDSQGG-----RVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVXSCGHDG 819
            + A P Y L+ +F F PI+ES VSR MTRRY +D+  YA++D    GAGSAGL+ AY + ++ P+++IAIIE SV+PGGGAWLGGQLFSAMVVRKPA +FL+E+G+ Y+++ +YVV +HAALFTST+M++ LA PNV+LFNA A E+L  + G     R+ GVVTNW LVS+NH  QSCMDPN +   +VV + GHDG
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNHGLQSCMDPNTINAHLVVSATGHDG 234          
BLAST of EY728658 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 9.207e-58
Identity = 113/184 (61.41%), Postives = 137/184 (74.46%), Query Frame = 1
Query:  280 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVXQHAALFTSTIMSKLLAPPNVQLFNAVAAEEL----DSQGGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVXSCGHD 816
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS  Y L K  P+++IAIIE SVSPGGGAWLGGQLFSAMV+RKPA  FL E+G+ Y+++ NYVV +HAALFTSTIMSK+L  PN +LFNA   E+L      +G R+ GVVTNW LVSM+HD QSCMDPN +   +V+ + GHD
Sbjct:   48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLVSMHHDDQSCMDPNTINAPLVISTTGHD 231          
BLAST of EY728658 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.962e-56
Identity = 109/188 (57.98%), Postives = 142/188 (75.53%), Query Frame = 1
Query:  280 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE--QDNYVVXQHAALFTSTIMSKLLAPPNVQLFNAVAAEEL-----DSQGGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVXSCGHDG 819
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L+K  P+++IAI+E SVSPGGGAWLGGQLFSAMV+R+PA +FL+ELG+ Y+E    NYVV +HA+LFTST+MSK+L+ PNV+LFNA A E+L     ++   ++ GVV NW LV+++HD  SCMDPN +   V++ + GHDG
Sbjct:   48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSKVLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNWTLVTLHHDDHSCMDPNTINAPVIISTTGHDG 235          
BLAST of EY728658 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.295e-55
Identity = 110/217 (50.69%), Postives = 146/217 (67.28%), Query Frame = 1
Query:  202 LQPIKSSRPNNLSISASA---SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVXQHAALFTSTIMSKLLAPPNVQLFNAVAAEEL-------DSQGGRVGGVVTNWALVSMNHDTQSCMDPNVMETKVVVXSCGHDG 819
            + P+KS + +N +++  A    P  +L   KF PIKE  V R M RRY  DM   A +D    GAGSAGLSCAY L +  P+++I I+E +V+PGGG WLGGQL SAMV RKPA  FLD++G+ Y+++ N+VV +HAALFTST++SK+LA PNV++FNA A E+L       +    R+ G VTNW LVS+NHD QSCMDP+ +   +V    GHDG
Sbjct:   24 MDPLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSKVLAMPNVKMFNATACEDLIIKPCPINPGVQRIAGCVTNWTLVSLNHDHQSCMDPSTITAPLVCSFAGHDG 240          
The following BLAST results are available for this feature:
BLAST of EY728658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
THI4_CITSI1.821e-12294.02Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL3.458e-9779.09Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH2.171e-9172.84Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE5.005e-8870.00Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE4.237e-8769.33Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI4_FUSOX1.678e-5961.08Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI2_SCHPO1.678e-5958.08Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_FUSSH9.207e-5861.41Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_ASPOR2.962e-5657.98Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]
THI4_UROFA7.295e-5550.69Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-G09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728658 ID=EY728658; Name=EY728658; organism=Citrus sinensis; type=EST; length=821bp
CCACGCGTCCGCATCATCACTGCTGCAAATCAAATTACTTCTCATTATCA
AACTTCTAAGCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAACCATGGCAG
CCATGGCTTCTACAGCTTTCGCTCCTTCAGTTTCGTCCACCACCAATAAG
CTCTTTGACTCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACG
TCTTCAACCCATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTT
CTGCTTCTCCTCCTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAA
GAATCCATTGTTTCTCGTGAAATGACACGCAGGTACATGACGGACATGAT
CACTTATGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCC
TCTCTTGTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATT
ATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCGGTGGACAGCT
CTTCTCTGCCATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGC
TTGGCATCGACTACGATGAGCAAGACAACTATGTTGTGATNCAGCATGCA
GCGCTGTTCACCTCCACTATAATGAGCAAGCTCCTGGCCCCGCCCAACGT
NCAGCTCTTTAATGCAGTGGCAGCCGAGGAACTTGATAGTCAAGGCGGCA
GAGTTGGTGGTGTGGTGACCAACTGGGCGTTGGTGTCAATGAATCACGAT
ACACAGTCTTGCATGGATCCCAATGTAATGGAAACGAAGGTTGTTGTGAN
CTCCTGTGGCCATGATGGGCC
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