EY728641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN3_ARATH (5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 PE=2 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 1.903e-94 Identity = 164/217 (75.58%), Postives = 185/217 (85.25%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHVFR-LGDLMRIEYPEKSTSHRR 709 +NVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML LATHEVHFSILREVV+TPGQQ++CFLCGQ GH A+NCEGK K++AGE DEKGD KKPYQFLHIW LREYL+ E RIPNPPFEIDLE IVDDFIF+CFFVGNDFLPHMPTLEIREGAINLLMAVYKKE + GYLTDG KP+L+RVE + +G + +++ H+R Sbjct: 198 ANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVKKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQR 414
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN4_ARATH (5'-3' exoribonuclease 4 OS=Arabidopsis thaliana GN=XRN4 PE=2 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 1.014e-79 Identity = 140/195 (71.79%), Postives = 160/195 (82.05%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEH 646 SNVPGEGEHKIMSY+RLQRNLPG+DPNTRHCLYGLDADLIML+LATHEVHFSILREV+ PGQQ+KCF+CGQ GH A++C GK+ D + + KK YQFL+IW LREYL YE IP+PPF I+ E I+DDF+F+CFFVGNDFLPHMPTLEIREGAINLLM VY+KE A+GGYLTD + L RVEH Sbjct: 199 SNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAAD-----IPIHKKKYQFLNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRKEFTAMGGYLTDSGEVLLDRVEH 388
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_ARATH (5'-3' exoribonuclease 2 OS=Arabidopsis thaliana GN=XRN2 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 4.874e-74 Identity = 131/198 (66.16%), Postives = 160/198 (80.81%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHVFR 655 +NVPGEGEHKIMSY+R +N PGY+PNT HCLYGLDADLIML+LATHE+HFSILREVVF PG++ KCFLCGQ GH AA+CEGK KRK GE + + VV KKPY+F++IW LREYL+++ +IP + +L+ ++DDFIF+CFFVGNDFLPHMPTLEIREGAI LLM+VYK + + YLTD SK +LR VE + Sbjct: 200 ANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIMLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVVKKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIK 395
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_CHAGB (5'-3' exoribonuclease 2 OS=Chaetomium globosum GN=RAT1 PE=3 SV=3) HSP 1 Score: 236.498 bits (602), Expect = 1.626e-61 Identity = 116/197 (58.88%), Postives = 138/197 (70.05%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHV 649 + VPGEGEHKIM +VR QRN P +DPNTRH +YGLDADLIML LATHE HF +LRE V F G+ C LCGQ GH NC G+AK KAGEFDEK + P KP+ +LH+ LREYL E IPN PF DLE +DD++FMCFFVGNDFLPH+P LEIRE I LMA++K +GGY+T L R +++ Sbjct: 205 ATVPGEGEHKIMEFVRSQRNSPEHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQQGKARMCKLCGQKGHDERNCRGEAKEKAGEFDEK--DKAEPLKPFIWLHVSILREYLAIELNIPNLPFRWDLERAIDDWVFMCFFVGNDFLPHLPALEIRENGIETLMAIWKDNLPVMGGYVTKDGHVDLDRAQYI 399
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_NEUCR (5'-3' exoribonuclease 2 OS=Neurospora crassa GN=rat-1 PE=3 SV=3) HSP 1 Score: 236.113 bits (601), Expect = 2.124e-61 Identity = 113/197 (57.36%), Postives = 141/197 (71.57%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHV 649 + VPGEGEHKIM +VR QR P +DPNTRH +YGLDADLIML LATHE HF +LRE VF + + C +CGQ GH A NC+G+AK K GEFDEK + VVP KP+ +LH+ LREYL E +P PF+ +LE +DD++FMCFFVGNDFLPH+P LEIRE I+ L A++K +GGYLT L RV+++ Sbjct: 204 ATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFDEK--DAVVPLKPFIWLHVSILREYLAIELDVPGLPFQFNLERAIDDWVFMCFFVGNDFLPHLPALEIRENGIDTLTAIWKDNLPVMGGYLTKDGHADLERVQYI 398
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_USTMA (5'-3' exoribonuclease 2 OS=Ustilago maydis GN=RAT1 PE=3 SV=3) HSP 1 Score: 230.72 bits (587), Expect = 8.924e-60 Identity = 111/195 (56.92%), Postives = 145/195 (74.36%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVE 643 ++VPGEGEHKIM ++R QR+ P +DPNT+H +YGLDADLIML+LATHE +F +LRE VF + K C LCGQPGH AA+C G AK+K+G+ DE KKP+ FL + TLREYL+ E IP PF DLE +DD++F+ FFVGNDFLPH+P+LEIR+GAI+ L+ ++KKE A+GGYLT+ + L R + Sbjct: 205 ASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLDADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKSGQHDEIAP-TPPEKKPFIFLDVATLREYLEVELNIPQLPFAFDLERAIDDWVFLIFFVGNDFLPHLPSLEIRDGAIDTLLRIWKKELPAMGGYLTNHGRVELGRAQ 398
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_EMENI (5'-3' exoribonuclease 2 OS=Emericella nidulans GN=rat1 PE=3 SV=3) HSP 1 Score: 228.409 bits (581), Expect = 4.429e-59 Identity = 108/199 (54.27%), Postives = 140/199 (70.35%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHVFR 655 + VPGEGEHKIM ++R QR P +DPN RH +YGLDADLIML LATHE HF +LRE V F +Q C LCGQPGH A C G+AK K GEFDEKG + KP+ +LH+ LREYL E +P+ PF DLE +DD++FMCFFVGNDFLPH+P+L+IRE I+ L+A+++ +GGYLT + L++ + + + Sbjct: 202 ATVPGEGEHKIMEFIRSQRASPEHDPNARHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKQRTCHLCGQPGHKAEECRGQAKEKNGEFDEKGKGATL--KPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDIREDGIDTLIAIWRDNIPLMGGYLTQDGRVDLKKAQLILQ 398
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_ASPFU (5'-3' exoribonuclease 2 OS=Aspergillus fumigatus GN=rat1 PE=3 SV=4) HSP 1 Score: 222.246 bits (565), Expect = 3.174e-57 Identity = 107/199 (53.77%), Postives = 138/199 (69.35%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHVFR 655 + VPGEGEHKIM ++R QR P +DPNTRH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K GEFDEK + KP+ +LH+ LREYL E +P+ PF DLE +DD++FMCFFVGNDFLPH+P+L+IRE I+ L+A+++ +GGYLT+ L+R + + + Sbjct: 203 ATVPGEGEHKIMEFIRSQRAAPEHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEKNGEFDEKQKGSSL--KPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQ 399
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_GIBZE (5'-3' exoribonuclease 2 OS=Gibberella zeae GN=RAT1 PE=3 SV=3) HSP 1 Score: 219.935 bits (559), Expect = 1.575e-56 Identity = 110/195 (56.41%), Postives = 134/195 (68.72%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDK-CFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVE 643 + VPGEGEHKIM++VR QR P +DPNTRH +YGLDADLIML LATHE HF +LRE VF Q+ + C +CGQ GH A NC G+ K+K GE DEK V + KP+ +LH+ LREYL E +PN PF DLE VDD+IFMC FVGNDFLPH+P LEIRE I+ L ++K +GGY+T L R + Sbjct: 204 ATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKKDGEHDEKDKGVAL--KPFIWLHVAVLREYLAVELGVPNLPFRFDLERAVDDWIFMCCFVGNDFLPHLPALEIREHGIDTLTKIWKDNLPVMGGYVTKDGHIDLERAQ 396
BLAST of EY728641 vs. ExPASy Swiss-Prot
Match: XRN2_ASPOR (5'-3' exoribonuclease 2 OS=Aspergillus oryzae GN=rat1 PE=3 SV=3) HSP 1 Score: 219.164 bits (557), Expect = 2.687e-56 Identity = 105/199 (52.76%), Postives = 137/199 (68.84%), Query Frame = 2 Query: 62 SNVPGEGEHKIMSYVRLQRNLPGYDPNTRHCLYGLDADLIMLALATHEVHFSILRE-VVFTPGQQDKCFLCGQPGHLAANCEGKAKRKAGEFDEKGDEVVVPKKPYQFLHIWTLREYLDYEFRIPNPPFEIDLECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKECXALGGYLTDGSKPSLRRVEHVFR 655 + VPGEGEHKIM +VR QR P +DPNTRH +YGLDADLIML LATHE HF +LRE V F + C LCGQ GH A C G+AK K G+FDEKG + KP+ +L++ LREYL E +P+ PF DLE +DD++FMCFFVGNDFLPH+P+L+IRE I+ L+A+++ +GGYLT ++ + + + Sbjct: 201 ATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNGQFDEKGKGTSL--KPFIWLNVSILREYLAVELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDIRENGIDTLIAIWRDNIPVMGGYLTKDGHVEFKKAQLILQ 397 The following BLAST results are available for this feature:
BLAST of EY728641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728641 ID=EY728641; Name=EY728641; organism=Citrus sinensis; type=EST; length=913bpback to top |